RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 ANXA1P04083 346 aa17.86■□□□□ 0.45
RNF40-212ENST00000602784 MMP10P09238 476 aa17.86■□□□□ 0.45
RNF40-212ENST00000602784 STK31Q9BXU1 1019 aa17.86■□□□□ 0.45
RNF40-212ENST00000602784 ZNF652Q9Y2D9 606 aa17.86■□□□□ 0.45
RNF40-212ENST00000602784 MAP3K15Q6ZN16 1313 aa17.86■□□□□ 0.45
RNF40-212ENST00000602784 SCN7AQ01118 1682 aa17.86■□□□□ 0.45
RNF40-212ENST00000602784 TTLL7Q6ZT98 887 aa17.85■□□□□ 0.45
RNF40-212ENST00000602784 COPS6Q7L5N1 327 aa17.85■□□□□ 0.45
RNF40-212ENST00000602784 XAGE3Q8WTP9 111 aa17.85■□□□□ 0.45
RNF40-212ENST00000602784 ZNF428Q96B54 188 aa17.85■□□□□ 0.45
RNF40-212ENST00000602784 BCORQ6W2J9 1755 aa17.84■□□□□ 0.45
RNF40-212ENST00000602784 CT47B1P0C2W7 299 aaPredicted RBP17.84■□□□□ 0.45
RNF40-212ENST00000602784 NFIXQ14938 502 aa17.83■□□□□ 0.44
RNF40-212ENST00000602784 PPP1R1BQ9UD71 204 aaPredicted RBP17.83■□□□□ 0.44
RNF40-212ENST00000602784 PARP3Q9Y6F1 533 aa17.83■□□□□ 0.44
RNF40-212ENST00000602784 SLC4A2P04920 1241 aa17.82■□□□□ 0.44
RNF40-212ENST00000602784 AIMP1Q12904 312 aaKnown RBP17.82■□□□□ 0.44
RNF40-212ENST00000602784 TBC1D9BQ66K14 1250 aa17.82■□□□□ 0.44
RNF40-212ENST00000602784 GIGYF2Q6Y7W6 1299 aaKnown RBP17.82■□□□□ 0.44
RNF40-212ENST00000602784 ANKRD13DQ6ZTN6 518 aa17.82■□□□□ 0.44
RNF40-212ENST00000602784 PLBD2Q8NHP8 589 aa17.82■□□□□ 0.44
RNF40-212ENST00000602784 CACNA1FO60840 1977 aa17.82■□□□□ 0.44
RNF40-212ENST00000602784 POLRMTO00411 1230 aaKnown RBP17.81■□□□□ 0.44
RNF40-212ENST00000602784 DDR1Q08345 913 aa17.81■□□□□ 0.44
RNF40-212ENST00000602784 HLFQ16534 295 aa17.81■□□□□ 0.44
RNF40-212ENST00000602784 SETDB2Q96T68 719 aa17.81■□□□□ 0.44
RNF40-212ENST00000602784 ZBTB3Q9H5J0 574 aa17.81■□□□□ 0.44
RNF40-212ENST00000602784 PHAXQ9H814 394 aaKnown RBP17.8■□□□□ 0.44
RNF40-212ENST00000602784 ATP10DQ9P241 1426 aa17.8■□□□□ 0.44
RNF40-212ENST00000602784 CARMIL3Q8ND23 1372 aa17.79■□□□□ 0.44
RNF40-212ENST00000602784 DDX58O95786 925 aaKnown RBP17.79■□□□□ 0.44
RNF40-212ENST00000602784 HSP90AB3PQ58FF7 597 aa17.79■□□□□ 0.44
RNF40-212ENST00000602784 CD2APQ9Y5K6 639 aa17.79■□□□□ 0.44
RNF40-212ENST00000602784 NUP98P52948 1817 aa17.78■□□□□ 0.44
RNF40-212ENST00000602784 TCERG1O14776 1098 aaKnown RBP17.78■□□□□ 0.44
RNF40-212ENST00000602784 SERPINB2P05120 415 aa17.78■□□□□ 0.44
RNF40-212ENST00000602784 BICDL1Q6ZP65 573 aa17.78■□□□□ 0.44
RNF40-212ENST00000602784 ZNF34Q8IZ26 560 aa17.78■□□□□ 0.44
RNF40-212ENST00000602784 NIP7Q9Y221 180 aaKnown RBP eCLIP17.78■□□□□ 0.44
RNF40-212ENST00000602784 TCIRG1Q13488 830 aa17.77■□□□□ 0.44
RNF40-212ENST00000602784 ALDH1L2Q3SY69 923 aa17.77■□□□□ 0.44
RNF40-212ENST00000602784 FHDC1Q9C0D6 1143 aaPredicted RBP17.77■□□□□ 0.44
RNF40-212ENST00000602784 NRXN2Q9P2S2 1712 aa17.76■□□□□ 0.43
RNF40-212ENST00000602784 FLIIQ13045 1269 aa17.76■□□□□ 0.43
RNF40-212ENST00000602784 PARP10Q53GL7 1025 aa17.76■□□□□ 0.43
RNF40-212ENST00000602784 KSR2Q6VAB6 950 aa17.76■□□□□ 0.43
RNF40-212ENST00000602784 G2E3Q7L622 706 aa17.76■□□□□ 0.43
RNF40-212ENST00000602784 RIC3Q7Z5B4 369 aa17.76■□□□□ 0.43
RNF40-212ENST00000602784 TRIM28Q13263 835 aaKnown RBP17.75■□□□□ 0.43
RNF40-212ENST00000602784 TPTE2Q6XPS3 522 aa17.75■□□□□ 0.43
RNF40-212ENST00000602784 SYT17Q9BSW7 474 aa17.75■□□□□ 0.43
RNF40-212ENST00000602784 C10orf71Q711Q0 1435 aa17.74■□□□□ 0.43
RNF40-212ENST00000602784 BRPF1P55201 1214 aaPredicted RBP17.74■□□□□ 0.43
RNF40-212ENST00000602784 NBPF5PQ86XG9 351 aaPredicted RBP17.74■□□□□ 0.43
RNF40-212ENST00000602784 SSH1Q8WYL5 1049 aa17.74■□□□□ 0.43
RNF40-212ENST00000602784 IBTKQ9P2D0 1353 aaPredicted RBP17.74■□□□□ 0.43
RNF40-212ENST00000602784 AFDNP55196 1824 aaKnown RBP17.73■□□□□ 0.43
RNF40-212ENST00000602784 KIF13BQ9NQT8 1826 aa17.73■□□□□ 0.43
RNF40-212ENST00000602784 PI4KAP2A4QPH2 592 aa17.73■□□□□ 0.43
RNF40-212ENST00000602784 MRPL50Q8N5N7 158 aaKnown RBP17.73■□□□□ 0.43
RNF40-212ENST00000602784 PI4KAP1Q8N8J0 262 aa17.73■□□□□ 0.43
RNF40-212ENST00000602784 CNBD1Q8NA66 436 aa17.73■□□□□ 0.43
RNF40-212ENST00000602784 ISCA1Q9BUE6 129 aa17.73■□□□□ 0.43
RNF40-212ENST00000602784 METTL22Q9BUU2 404 aaPredicted RBP17.73■□□□□ 0.43
RNF40-212ENST00000602784 NYXQ9GZU5 481 aa17.73■□□□□ 0.43
RNF40-212ENST00000602784 UBN2Q6ZU65 1347 aa17.72■□□□□ 0.43
RNF40-212ENST00000602784 ADCY9O60503 1353 aa17.72■□□□□ 0.43
RNF40-212ENST00000602784 GPTP24298 496 aa17.72■□□□□ 0.43
RNF40-212ENST00000602784 TGFB2P61812 414 aa17.72■□□□□ 0.43
RNF40-212ENST00000602784 FKBP5Q13451 457 aaPredicted RBP17.72■□□□□ 0.43
RNF40-212ENST00000602784 PRR5LQ6MZQ0 368 aa17.72■□□□□ 0.43
RNF40-212ENST00000602784 PPP1R42Q7Z4L9 355 aa17.72■□□□□ 0.43
RNF40-212ENST00000602784 NLRP10Q86W26 655 aa17.72■□□□□ 0.43
RNF40-212ENST00000602784 MAP3K2Q9Y2U5 619 aa17.72■□□□□ 0.43
RNF40-212ENST00000602784 RNF123Q5XPI4 1314 aa17.72■□□□□ 0.43
RNF40-212ENST00000602784 ANKRD36CQ5JPF3 1778 aa17.71■□□□□ 0.43
RNF40-212ENST00000602784 ARFGEF2Q9Y6D5 1785 aa17.71■□□□□ 0.43
RNF40-212ENST00000602784 RARSP54136 660 aaKnown RBP17.71■□□□□ 0.43
RNF40-212ENST00000602784 SUSD4Q5VX71 490 aa17.71■□□□□ 0.43
RNF40-212ENST00000602784 BRIP1Q9BX63 1249 aa17.71■□□□□ 0.43
RNF40-212ENST00000602784 ST5P78524 1137 aa17.7■□□□□ 0.42
RNF40-212ENST00000602784 KLHL34Q8N239 644 aa17.7■□□□□ 0.42
RNF40-212ENST00000602784 SMC4Q9NTJ3 1288 aa17.7■□□□□ 0.42
RNF40-212ENST00000602784 PDZRN3Q9UPQ7 1066 aa17.7■□□□□ 0.42
RNF40-212ENST00000602784 PTPRCP08575 1304 aa17.7■□□□□ 0.42
RNF40-212ENST00000602784 NPHP1O15259 732 aa17.69■□□□□ 0.42
RNF40-212ENST00000602784 NTSR2O95665 410 aa17.69■□□□□ 0.42
RNF40-212ENST00000602784 NEXNQ0ZGT2 675 aa17.69■□□□□ 0.42
RNF40-212ENST00000602784 CCDC191Q8NCU4 936 aa17.69■□□□□ 0.42
RNF40-212ENST00000602784 DNAAF4Q8WXU2 420 aa17.69■□□□□ 0.42
RNF40-212ENST00000602784 UTP14AQ9BVJ6 771 aaKnown RBP17.69■□□□□ 0.42
RNF40-212ENST00000602784 ATP5J2-PTCD1G3V325 749 aa17.68■□□□□ 0.42
RNF40-212ENST00000602784 GTF2E1P29083 439 aaPredicted RBP17.68■□□□□ 0.42
RNF40-212ENST00000602784 PDE6BP35913 854 aa17.68■□□□□ 0.42
RNF40-212ENST00000602784 NLGN2Q8NFZ4 835 aa17.68■□□□□ 0.42
RNF40-212ENST00000602784 MYD88Q99836 296 aa17.68■□□□□ 0.42
RNF40-212ENST00000602784 FAM177BA6PVY3 158 aa17.67■□□□□ 0.42
RNF40-212ENST00000602784 SLC10A5Q5PT55 438 aa17.67■□□□□ 0.42
RNF40-212ENST00000602784 BCL2L13Q9BXK5 485 aa17.67■□□□□ 0.42
RNF40-212ENST00000602784 RIC1Q4ADV7 1423 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms