RNA–Protein interactions for RNA: ENST00000602171.5

FARP1-239, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-239ENST00000602171 RALGAPBQ86X10 1494 aa10.42□□□□□ -0.74
FARP1-239ENST00000602171 TECPR2O15040 1411 aa10.41□□□□□ -0.74
FARP1-239ENST00000602171 PTCH1Q13635 1447 aa10.41□□□□□ -0.74
FARP1-239ENST00000602171 PTPRUQ92729 1446 aa10.41□□□□□ -0.74
FARP1-239ENST00000602171 GPRASP1Q5JY77 1395 aa10.41□□□□□ -0.74
FARP1-239ENST00000602171 ADGRB1O14514 1584 aa10.41□□□□□ -0.74
FARP1-239ENST00000602171 NWD1Q149M9 1564 aa10.41□□□□□ -0.74
FARP1-239ENST00000602171 NR3C2P08235 984 aa10.41□□□□□ -0.74
FARP1-239ENST00000602171 C14orf37Q86TY3 774 aa10.41□□□□□ -0.74
FARP1-239ENST00000602171 ZFAND3Q9H8U3 227 aa10.41□□□□□ -0.74
FARP1-239ENST00000602171 POGKQ9P215 609 aa10.41□□□□□ -0.74
FARP1-239ENST00000602171 FAM135BQ49AJ0 1406 aa10.41□□□□□ -0.74
FARP1-239ENST00000602171 EMILIN1Q9Y6C2 1016 aa10.4□□□□□ -0.74
FARP1-239ENST00000602171 DLC1Q96QB1 1528 aa10.39□□□□□ -0.75
FARP1-239ENST00000602171 SETD1AO15047 1707 aaKnown RBP10.39□□□□□ -0.75
FARP1-239ENST00000602171 MAGEB6P1A0A0J9YX57 407 aa10.39□□□□□ -0.75
FARP1-239ENST00000602171 MAN1A2O60476 641 aa10.39□□□□□ -0.75
FARP1-239ENST00000602171 PRKCSHP14314 528 aaPredicted RBP10.39□□□□□ -0.75
FARP1-239ENST00000602171 GMPRP36959 345 aa10.39□□□□□ -0.75
FARP1-239ENST00000602171 SKIV2LQ15477 1246 aaKnown RBP10.39□□□□□ -0.75
FARP1-239ENST00000602171 PRAM1Q96QH2 718 aa10.39□□□□□ -0.75
FARP1-239ENST00000602171 CHD2O14647 1828 aaKnown RBP10.39□□□□□ -0.75
FARP1-239ENST00000602171 TRPM1Q7Z4N2 1603 aa10.39□□□□□ -0.75
FARP1-239ENST00000602171 FSHRP23945 695 aa10.38□□□□□ -0.75
FARP1-239ENST00000602171 PDXDC2PQ6P474 469 aa10.38□□□□□ -0.75
FARP1-239ENST00000602171 DDRGK1Q96HY6 314 aa10.38□□□□□ -0.75
FARP1-239ENST00000602171 CDV3Q9UKY7 258 aaKnown RBP10.38□□□□□ -0.75
FARP1-239ENST00000602171 XRN1Q8IZH2 1706 aaKnown RBP10.38□□□□□ -0.75
FARP1-239ENST00000602171 MSH6P52701 1360 aa10.38□□□□□ -0.75
FARP1-239ENST00000602171 TMEM94Q12767 1356 aa10.38□□□□□ -0.75
FARP1-239ENST00000602171 ROBO2Q9HCK4 1378 aa10.38□□□□□ -0.75
FARP1-239ENST00000602171 ASXL1Q8IXJ9 1541 aa10.38□□□□□ -0.75
FARP1-239ENST00000602171 CENPJQ9HC77 1338 aaPredicted RBP10.37□□□□□ -0.75
FARP1-239ENST00000602171 LTBP4Q8N2S1 1624 aa10.37□□□□□ -0.75
FARP1-239ENST00000602171 BMP2P12643 396 aa10.37□□□□□ -0.75
FARP1-239ENST00000602171 VEGFBP49765 207 aa10.37□□□□□ -0.75
FARP1-239ENST00000602171 C6orf118Q5T5N4 469 aa10.37□□□□□ -0.75
FARP1-239ENST00000602171 MEIOBQ8N635 442 aa10.37□□□□□ -0.75
FARP1-239ENST00000602171 ZSCAN1Q8NBB4 408 aa10.37□□□□□ -0.75
FARP1-239ENST00000602171 TSEN34Q9BSV6 310 aaKnown RBP10.37□□□□□ -0.75
FARP1-239ENST00000602171 C19orf44Q9H6X5 657 aa10.37□□□□□ -0.75
FARP1-239ENST00000602171 LRRC7Q96NW7 1537 aa10.37□□□□□ -0.75
FARP1-239ENST00000602171 IQSEC2Q5JU85 1478 aa10.36□□□□□ -0.75
FARP1-239ENST00000602171 ZC3H4Q9UPT8 1303 aaKnown RBP10.36□□□□□ -0.75
FARP1-239ENST00000602171 KNDC1Q76NI1 1749 aa10.36□□□□□ -0.75
FARP1-239ENST00000602171 ATF3P18847 181 aa10.36□□□□□ -0.75
FARP1-239ENST00000602171 CTDSPL2Q05D32 466 aa10.36□□□□□ -0.75
FARP1-239ENST00000602171 SH3D19Q5HYK7 790 aa10.36□□□□□ -0.75
FARP1-239ENST00000602171 WAPLQ7Z5K2 1190 aa10.36□□□□□ -0.75
FARP1-239ENST00000602171 CCDC116Q8IYX3 515 aa10.36□□□□□ -0.75
FARP1-239ENST00000602171 LINC00528Q8N1L1 170 aa10.36□□□□□ -0.75
FARP1-239ENST00000602171 TOM1O60784 492 aa10.35□□□□□ -0.75
FARP1-239ENST00000602171 EIF4G2P78344 907 aaKnown RBP eCLIP10.35□□□□□ -0.75
FARP1-239ENST00000602171 FKBPLQ9UIM3 349 aa10.35□□□□□ -0.75
FARP1-239ENST00000602171 DCCP43146 1447 aa10.34□□□□□ -0.75
FARP1-239ENST00000602171 VSIG8P0DPA2 414 aa10.34□□□□□ -0.75
FARP1-239ENST00000602171 SAFB2Q14151 953 aaKnown RBP eCLIP10.34□□□□□ -0.75
FARP1-239ENST00000602171 ERFEQ4G0M1 354 aa10.34□□□□□ -0.75
FARP1-239ENST00000602171 PNMA1Q8ND90 353 aa10.34□□□□□ -0.75
FARP1-239ENST00000602171 ARHGAP9Q9BRR9 750 aa10.34□□□□□ -0.75
FARP1-239ENST00000602171 CARD14Q9BXL6 1004 aa10.34□□□□□ -0.75
FARP1-239ENST00000602171 PGPEP1Q9NXJ5 209 aa10.34□□□□□ -0.75
FARP1-239ENST00000602171 USP47Q96K76 1375 aa10.34□□□□□ -0.75
FARP1-239ENST00000602171 ADGRL3Q9HAR2 1447 aa10.33□□□□□ -0.76
FARP1-239ENST00000602171 TPRNQ4KMQ1 711 aa10.33□□□□□ -0.76
FARP1-239ENST00000602171 PPP2R2DQ66LE6 453 aa10.33□□□□□ -0.76
FARP1-239ENST00000602171 ERBB4Q15303 1308 aa10.33□□□□□ -0.76
FARP1-239ENST00000602171 STRCP1A6NGW2 1772 aa10.32□□□□□ -0.76
FARP1-239ENST00000602171 PLEKHH1Q9ULM0 1364 aa10.32□□□□□ -0.76
FARP1-239ENST00000602171 SBNO2Q9Y2G9 1366 aa10.32□□□□□ -0.76
FARP1-239ENST00000602171 ST20-MTHFSA0A0A6YYL1 179 aa10.32□□□□□ -0.76
FARP1-239ENST00000602171 DHX9Q08211 1270 aaKnown RBP10.32□□□□□ -0.76
FARP1-239ENST00000602171 CDCA8Q53HL2 280 aa10.32□□□□□ -0.76
FARP1-239ENST00000602171 ZBTB33Q86T24 672 aa10.32□□□□□ -0.76
FARP1-239ENST00000602171 SLC10A4Q96EP9 437 aa10.32□□□□□ -0.76
FARP1-239ENST00000602171 KDM4CQ9H3R0 1056 aa10.32□□□□□ -0.76
FARP1-239ENST00000602171 EVC2Q86UK5 1308 aa10.32□□□□□ -0.76
FARP1-239ENST00000602171 SOBPA7XYQ1 873 aa10.31□□□□□ -0.76
FARP1-239ENST00000602171 WASLO00401 505 aaPredicted RBP10.31□□□□□ -0.76
FARP1-239ENST00000602171 TMF1P82094 1093 aa10.31□□□□□ -0.76
FARP1-239ENST00000602171 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.31□□□□□ -0.76
FARP1-239ENST00000602171 GPSM3Q9Y4H4 160 aa10.31□□□□□ -0.76
FARP1-239ENST00000602171 SOS2Q07890 1332 aaPredicted RBP10.31□□□□□ -0.76
FARP1-239ENST00000602171 UBAP1LF5GYI3 381 aa10.3□□□□□ -0.76
FARP1-239ENST00000602171 PTK2Q05397 1052 aa10.3□□□□□ -0.76
FARP1-239ENST00000602171 HIRIP3Q9BW71 556 aaPredicted RBP10.3□□□□□ -0.76
FARP1-239ENST00000602171 ARHGEF28Q8N1W1 1705 aaKnown RBP10.3□□□□□ -0.76
FARP1-239ENST00000602171 HSPA5P11021 654 aaKnown RBP10.29□□□□□ -0.76
FARP1-239ENST00000602171 SRPK2P78362 688 aaKnown RBP10.29□□□□□ -0.76
FARP1-239ENST00000602171 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.29□□□□□ -0.76
FARP1-239ENST00000602171 PPP1R26Q5T8A7 1209 aaPredicted RBP10.29□□□□□ -0.76
FARP1-239ENST00000602171 LRRN4Q8WUT4 740 aa10.29□□□□□ -0.76
FARP1-239ENST00000602171 PUS7Q96PZ0 661 aaKnown RBP10.29□□□□□ -0.76
FARP1-239ENST00000602171 CDK19Q9BWU1 502 aa10.29□□□□□ -0.76
FARP1-239ENST00000602171 SLAIN2Q9P270 581 aa10.29□□□□□ -0.76
FARP1-239ENST00000602171 CDC42BPGQ6DT37 1551 aa10.28□□□□□ -0.76
FARP1-239ENST00000602171 KCTD15Q96SI1 283 aaPredicted RBP10.28□□□□□ -0.76
FARP1-239ENST00000602171 ADGRB2O60241 1585 aa10.27□□□□□ -0.76
FARP1-239ENST00000602171 ANKARQ7Z5J8 1434 aa10.27□□□□□ -0.77
FARP1-239ENST00000602171 PPFIA3O75145 1194 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms