RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 ADCY9O60503 1353 aa20.46■□□□□ 0.87
IRF3-226ENST00000600453 ZNF316A6NFI3 1004 aaPredicted RBP20.46■□□□□ 0.87
IRF3-226ENST00000600453 KIF6Q6ZMV9 814 aa20.46■□□□□ 0.87
IRF3-226ENST00000600453 NIP7Q9Y221 180 aaKnown RBP eCLIP20.46■□□□□ 0.87
IRF3-226ENST00000600453 NGEFQ8N5V2 710 aa20.45■□□□□ 0.86
IRF3-226ENST00000600453 ZNF622Q969S3 477 aaKnown RBP eCLIP20.45■□□□□ 0.86
IRF3-226ENST00000600453 CHL1O00533 1208 aa20.44■□□□□ 0.86
IRF3-226ENST00000600453 CNKSR1Q969H4 720 aa20.44■□□□□ 0.86
IRF3-226ENST00000600453 LAMB4A4D0S4 1761 aa20.44■□□□□ 0.86
IRF3-226ENST00000600453 MYL6BP14649 208 aa20.43■□□□□ 0.86
IRF3-226ENST00000600453 GTF2E1P29083 439 aaPredicted RBP20.43■□□□□ 0.86
IRF3-226ENST00000600453 CALD1Q05682 793 aaKnown RBP20.43■□□□□ 0.86
IRF3-226ENST00000600453 TRIM35Q9UPQ4 493 aa20.43■□□□□ 0.86
IRF3-226ENST00000600453 BCORQ6W2J9 1755 aa20.42■□□□□ 0.86
IRF3-226ENST00000600453 EIF2S2P20042 333 aaKnown RBP20.42■□□□□ 0.86
IRF3-226ENST00000600453 C9orf131Q5VYM1 1079 aa20.42■□□□□ 0.86
IRF3-226ENST00000600453 NYXQ9GZU5 481 aa20.42■□□□□ 0.86
IRF3-226ENST00000600453 LAS1LQ9Y4W2 734 aaKnown RBP20.42■□□□□ 0.86
IRF3-226ENST00000600453 MAP3K15Q6ZN16 1313 aa20.42■□□□□ 0.86
IRF3-226ENST00000600453 HLFQ16534 295 aa20.41■□□□□ 0.86
IRF3-226ENST00000600453 STYK1Q6J9G0 422 aa20.41■□□□□ 0.86
IRF3-226ENST00000600453 ZNF526Q8TF50 670 aaPredicted RBP20.41■□□□□ 0.86
IRF3-226ENST00000600453 MASTLQ96GX5 879 aa20.41■□□□□ 0.86
IRF3-226ENST00000600453 CCDC24Q8N4L8 307 aa20.4■□□□□ 0.86
IRF3-226ENST00000600453 CFAP44Q96MT7 982 aa20.4■□□□□ 0.86
IRF3-226ENST00000600453 APAF1O14727 1248 aa20.39■□□□□ 0.85
IRF3-226ENST00000600453 ANP32CO43423 234 aa20.39■□□□□ 0.85
IRF3-226ENST00000600453 SRGNP10124 158 aa20.39■□□□□ 0.85
IRF3-226ENST00000600453 SOGA3Q5TF21 947 aa20.39■□□□□ 0.85
IRF3-226ENST00000600453 RNF181Q9P0P0 153 aa20.39■□□□□ 0.85
IRF3-226ENST00000600453 DLEC1Q9Y238 1755 aa20.39■□□□□ 0.85
IRF3-226ENST00000600453 HOXB7P09629 217 aa20.38■□□□□ 0.85
IRF3-226ENST00000600453 LMNB1P20700 586 aa20.38■□□□□ 0.85
IRF3-226ENST00000600453 TTLL7Q6ZT98 887 aa20.38■□□□□ 0.85
IRF3-226ENST00000600453 KLRG2A4D1S0 409 aaPredicted RBP20.37■□□□□ 0.85
IRF3-226ENST00000600453 NPR1P16066 1061 aa20.37■□□□□ 0.85
IRF3-226ENST00000600453 GIGYF2Q6Y7W6 1299 aaKnown RBP20.37■□□□□ 0.85
IRF3-226ENST00000600453 ANKRD31Q8N7Z5 1873 aa20.37■□□□□ 0.85
IRF3-226ENST00000600453 KDM2BQ8NHM5 1336 aa20.36■□□□□ 0.85
IRF3-226ENST00000600453 ZC3H4Q9UPT8 1303 aaKnown RBP20.36■□□□□ 0.85
IRF3-226ENST00000600453 FAM177BA6PVY3 158 aa20.36■□□□□ 0.85
IRF3-226ENST00000600453 ALDH1B1P30837 517 aa20.36■□□□□ 0.85
IRF3-226ENST00000600453 PDIA6Q15084 440 aa20.36■□□□□ 0.85
IRF3-226ENST00000600453 CHMP4AQ9BY43 222 aa20.36■□□□□ 0.85
IRF3-226ENST00000600453 ZBTB3Q9H5J0 574 aa20.36■□□□□ 0.85
IRF3-226ENST00000600453 C21orf2O43822 256 aa20.35■□□□□ 0.85
IRF3-226ENST00000600453 GNAI1P63096 354 aa20.35■□□□□ 0.85
IRF3-226ENST00000600453 PARP10Q53GL7 1025 aa20.35■□□□□ 0.85
IRF3-226ENST00000600453 PPP1R42Q7Z4L9 355 aa20.35■□□□□ 0.85
IRF3-226ENST00000600453 DDX21Q9NR30 783 aaKnown RBP eCLIP20.35■□□□□ 0.85
IRF3-226ENST00000600453 NUP98P52948 1817 aa20.34■□□□□ 0.85
IRF3-226ENST00000600453 HSP90AB3PQ58FF7 597 aa20.34■□□□□ 0.85
IRF3-226ENST00000600453 ZNF34Q8IZ26 560 aa20.34■□□□□ 0.85
IRF3-226ENST00000600453 IFT57Q9NWB7 429 aa20.34■□□□□ 0.85
IRF3-226ENST00000600453 SBF1O95248 1867 aa20.34■□□□□ 0.85
IRF3-226ENST00000600453 PRPF40BQ6NWY9 871 aaKnown RBP20.33■□□□□ 0.85
IRF3-226ENST00000600453 SENP3-EIF4A1A0A087X0R7 540 aa20.32■□□□□ 0.84
IRF3-226ENST00000600453 ZNF853P0CG23 659 aa20.32■□□□□ 0.84
IRF3-226ENST00000600453 GPTP24298 496 aa20.32■□□□□ 0.84
IRF3-226ENST00000600453 RASSF7Q02833 373 aa20.32■□□□□ 0.84
IRF3-226ENST00000600453 HDGFL1Q5TGJ6 251 aa20.32■□□□□ 0.84
IRF3-226ENST00000600453 COPS6Q7L5N1 327 aa20.32■□□□□ 0.84
IRF3-226ENST00000600453 LRP10Q7Z4F1 713 aa20.32■□□□□ 0.84
IRF3-226ENST00000600453 NECTIN2Q92692 538 aa20.32■□□□□ 0.84
IRF3-226ENST00000600453 ZNF219Q9P2Y4 722 aaPredicted RBP20.32■□□□□ 0.84
IRF3-226ENST00000600453 DBF4Q9UBU7 674 aaPredicted RBP20.32■□□□□ 0.84
IRF3-226ENST00000600453 IBTKQ9P2D0 1353 aaPredicted RBP20.32■□□□□ 0.84
IRF3-226ENST00000600453 KIF3CO14782 793 aa20.31■□□□□ 0.84
IRF3-226ENST00000600453 MBIPQ9NS73 344 aa20.31■□□□□ 0.84
IRF3-226ENST00000600453 LTBP3Q9NS15 1303 aa20.3■□□□□ 0.84
IRF3-226ENST00000600453 TOMM70O94826 608 aa20.3■□□□□ 0.84
IRF3-226ENST00000600453 AIMP1Q12904 312 aaKnown RBP20.3■□□□□ 0.84
IRF3-226ENST00000600453 SUSD4Q5VX71 490 aa20.3■□□□□ 0.84
IRF3-226ENST00000600453 DUSP27Q5VZP5 1158 aa20.3■□□□□ 0.84
IRF3-226ENST00000600453 DPY19L2Q6NUT2 758 aa20.3■□□□□ 0.84
IRF3-226ENST00000600453 C16orf71Q8IYS4 520 aaPredicted RBP20.3■□□□□ 0.84
IRF3-226ENST00000600453 XAGE3Q8WTP9 111 aa20.3■□□□□ 0.84
IRF3-226ENST00000600453 TAOK3Q9H2K8 898 aa20.3■□□□□ 0.84
IRF3-226ENST00000600453 HYPKQ9NX55 129 aa20.3■□□□□ 0.84
IRF3-226ENST00000600453 NFKBIEO00221 500 aa20.29■□□□□ 0.84
IRF3-226ENST00000600453 ANXA1P04083 346 aa20.29■□□□□ 0.84
IRF3-226ENST00000600453 KRT24Q2M2I5 525 aa20.29■□□□□ 0.84
IRF3-226ENST00000600453 PROSER3Q2NL68 480 aa20.29■□□□□ 0.84
IRF3-226ENST00000600453 ERFEQ4G0M1 354 aa20.29■□□□□ 0.84
IRF3-226ENST00000600453 NCBP3Q53F19 620 aaKnown RBP20.29■□□□□ 0.84
IRF3-226ENST00000600453 NUTM1Q86Y26 1132 aa20.29■□□□□ 0.84
IRF3-226ENST00000600453 UTP14AQ9BVJ6 771 aaKnown RBP20.29■□□□□ 0.84
IRF3-226ENST00000600453 MRS2Q9HD23 443 aa20.29■□□□□ 0.84
IRF3-226ENST00000600453 RNF123Q5XPI4 1314 aa20.28■□□□□ 0.84
IRF3-226ENST00000600453 CCDC27Q2M243 656 aa20.28■□□□□ 0.84
IRF3-226ENST00000600453 CRY2Q49AN0 593 aa20.28■□□□□ 0.84
IRF3-226ENST00000600453 CCDC93Q567U6 631 aa20.28■□□□□ 0.84
IRF3-226ENST00000600453 RTKN2Q8IZC4 609 aa20.28■□□□□ 0.84
IRF3-226ENST00000600453 RPGRQ92834 1020 aaKnown RBP20.28■□□□□ 0.84
IRF3-226ENST00000600453 CHPF2Q9P2E5 772 aa20.28■□□□□ 0.84
IRF3-226ENST00000600453 UBN2Q6ZU65 1347 aa20.27■□□□□ 0.84
IRF3-226ENST00000600453 TCIRG1Q13488 830 aa20.27■□□□□ 0.84
IRF3-226ENST00000600453 GRIPAP1Q4V328 841 aa20.27■□□□□ 0.84
IRF3-226ENST00000600453 CCDC184Q52MB2 194 aa20.27■□□□□ 0.84
IRF3-226ENST00000600453 CC2D2BQ6DHV5 1058 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms