RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 HYPKQ9NX55 129 aa19■□□□□ 0.63
SYDE1-204ENST00000600440 CLCN6P51797 869 aa19■□□□□ 0.63
SYDE1-204ENST00000600440 SGSM2O43147 1006 aa18.99■□□□□ 0.63
SYDE1-204ENST00000600440 CYP2C19P33261 490 aa18.99■□□□□ 0.63
SYDE1-204ENST00000600440 TAF7LQ5H9L4 462 aa18.99■□□□□ 0.63
SYDE1-204ENST00000600440 HOMER1Q86YM7 354 aa18.99■□□□□ 0.63
SYDE1-204ENST00000600440 RSPH14Q9UHP6 348 aa18.99■□□□□ 0.63
SYDE1-204ENST00000600440 ABCC1P33527 1531 aa18.99■□□□□ 0.63
SYDE1-204ENST00000600440 ADGRB1O14514 1584 aa18.99■□□□□ 0.63
SYDE1-204ENST00000600440 KRBA2Q6ZNG9 492 aa18.99■□□□□ 0.63
SYDE1-204ENST00000600440 C11orf57Q6ZUT1 292 aaPredicted RBP18.99■□□□□ 0.63
SYDE1-204ENST00000600440 PTPRCP08575 1304 aa18.99■□□□□ 0.63
SYDE1-204ENST00000600440 CYP46A1Q9Y6A2 500 aa18.99■□□□□ 0.63
SYDE1-204ENST00000600440 SEC31AO94979 1220 aaKnown RBP18.98■□□□□ 0.63
SYDE1-204ENST00000600440 SNW1Q13573 536 aaKnown RBP18.98■□□□□ 0.63
SYDE1-204ENST00000600440 INO80Q9ULG1 1556 aaPredicted RBP18.98■□□□□ 0.63
SYDE1-204ENST00000600440 CCT4P50991 539 aaKnown RBP18.98■□□□□ 0.63
SYDE1-204ENST00000600440 HAP1P54257 671 aaPredicted RBP18.98■□□□□ 0.63
SYDE1-204ENST00000600440 PTH1RQ03431 593 aa18.98■□□□□ 0.63
SYDE1-204ENST00000600440 TDRD7Q8NHU6 1098 aaKnown RBP18.98■□□□□ 0.63
SYDE1-204ENST00000600440 TSPYL4Q9UJ04 414 aa18.98■□□□□ 0.63
SYDE1-204ENST00000600440 SALL3Q9BXA9 1300 aa18.98■□□□□ 0.63
SYDE1-204ENST00000600440 TULP2O00295 520 aa18.97■□□□□ 0.63
SYDE1-204ENST00000600440 OS9Q13438 667 aaPredicted RBP18.97■□□□□ 0.63
SYDE1-204ENST00000600440 COL9A3Q14050 684 aaPredicted RBP18.97■□□□□ 0.63
SYDE1-204ENST00000600440 CCDC34Q96HJ3 373 aa18.97■□□□□ 0.63
SYDE1-204ENST00000600440 LSG1Q9H089 658 aaKnown RBP18.97■□□□□ 0.63
SYDE1-204ENST00000600440 TRIM66O15016 1216 aa18.97■□□□□ 0.63
SYDE1-204ENST00000600440 PPFIA3O75145 1194 aa18.97■□□□□ 0.63
SYDE1-204ENST00000600440 PNMA6AP0CW24 399 aaPredicted RBP18.97■□□□□ 0.63
SYDE1-204ENST00000600440 GYS2P54840 703 aa18.97■□□□□ 0.63
SYDE1-204ENST00000600440 ST5P78524 1137 aa18.97■□□□□ 0.63
SYDE1-204ENST00000600440 FAM177A1Q8N128 213 aaPredicted RBP18.97■□□□□ 0.63
SYDE1-204ENST00000600440 CCAR2Q8N163 923 aaKnown RBP18.97■□□□□ 0.63
SYDE1-204ENST00000600440 FMNL2Q96PY5 1086 aa18.97■□□□□ 0.63
SYDE1-204ENST00000600440 STK31Q9BXU1 1019 aa18.97■□□□□ 0.63
SYDE1-204ENST00000600440 EPC1Q9H2F5 836 aa18.97■□□□□ 0.63
SYDE1-204ENST00000600440 ZFYVE16Q7Z3T8 1539 aa18.97■□□□□ 0.63
SYDE1-204ENST00000600440 NRXN1Q9ULB1 1477 aa18.97■□□□□ 0.63
SYDE1-204ENST00000600440 TEX35Q5T0J7 233 aa18.97■□□□□ 0.63
SYDE1-204ENST00000600440 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.97■□□□□ 0.63
SYDE1-204ENST00000600440 CLSTN2Q9H4D0 955 aa18.96■□□□□ 0.63
SYDE1-204ENST00000600440 ST3GAL1Q11201 340 aa18.96■□□□□ 0.63
SYDE1-204ENST00000600440 LARP1Q6PKG0 1096 aaKnown RBP18.96■□□□□ 0.63
SYDE1-204ENST00000600440 PUS7Q96PZ0 661 aaKnown RBP18.96■□□□□ 0.63
SYDE1-204ENST00000600440 TPCN1Q9ULQ1 816 aa18.96■□□□□ 0.63
SYDE1-204ENST00000600440 FHOD1Q9Y613 1164 aa18.96■□□□□ 0.63
SYDE1-204ENST00000600440 ERBB3P21860 1342 aa18.96■□□□□ 0.63
SYDE1-204ENST00000600440 NYAP1Q6ZVC0 841 aa18.95■□□□□ 0.62
SYDE1-204ENST00000600440 LEO1Q8WVC0 666 aaPredicted RBP18.95■□□□□ 0.62
SYDE1-204ENST00000600440 KIF1BPQ96EK5 621 aa18.95■□□□□ 0.62
SYDE1-204ENST00000600440 DDX19AQ9NUU7 478 aaKnown RBP18.95■□□□□ 0.62
SYDE1-204ENST00000600440 SSH2Q76I76 1423 aa18.95■□□□□ 0.62
SYDE1-204ENST00000600440 FOXO3O43524 673 aa18.95■□□□□ 0.62
SYDE1-204ENST00000600440 RAB11FIP3O75154 756 aa18.95■□□□□ 0.62
SYDE1-204ENST00000600440 TMCO3Q6UWJ1 677 aa18.95■□□□□ 0.62
SYDE1-204ENST00000600440 WAPLQ7Z5K2 1190 aa18.95■□□□□ 0.62
SYDE1-204ENST00000600440 CNTROBQ8N137 903 aa18.95■□□□□ 0.62
SYDE1-204ENST00000600440 ZC3H13Q5T200 1668 aaKnown RBP18.95■□□□□ 0.62
SYDE1-204ENST00000600440 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.94■□□□□ 0.62
SYDE1-204ENST00000600440 GLI2P10070 1586 aa18.94■□□□□ 0.62
SYDE1-204ENST00000600440 VWDEQ8N2E2 1590 aa18.94■□□□□ 0.62
SYDE1-204ENST00000600440 SETBP1Q9Y6X0 1596 aa18.94■□□□□ 0.62
SYDE1-204ENST00000600440 PLA2G4AP47712 749 aa18.94■□□□□ 0.62
SYDE1-204ENST00000600440 ATP8B2P98198 1209 aa18.94■□□□□ 0.62
SYDE1-204ENST00000600440 GNL2Q13823 731 aaKnown RBP18.94■□□□□ 0.62
SYDE1-204ENST00000600440 CCDC191Q8NCU4 936 aa18.94■□□□□ 0.62
SYDE1-204ENST00000600440 UBXN4Q92575 508 aa18.94■□□□□ 0.62
SYDE1-204ENST00000600440 CHL1O00533 1208 aa18.93■□□□□ 0.62
SYDE1-204ENST00000600440 NCKAP5LQ9HCH0 1330 aa18.93■□□□□ 0.62
SYDE1-204ENST00000600440 CAMSAP1Q5T5Y3 1602 aa18.93■□□□□ 0.62
SYDE1-204ENST00000600440 SMC2O95347 1197 aa18.93■□□□□ 0.62
SYDE1-204ENST00000600440 GNAI3P08754 354 aa18.93■□□□□ 0.62
SYDE1-204ENST00000600440 CCZ1BP86790 482 aa18.93■□□□□ 0.62
SYDE1-204ENST00000600440 CCZ1P86791 482 aaPredicted RBP18.93■□□□□ 0.62
SYDE1-204ENST00000600440 MNS1Q8NEH6 495 aa18.93■□□□□ 0.62
SYDE1-204ENST00000600440 SMARCE1Q969G3 411 aa18.93■□□□□ 0.62
SYDE1-204ENST00000600440 PGBD1Q96JS3 809 aa18.93■□□□□ 0.62
SYDE1-204ENST00000600440 SCAND2PQ9GZW5 306 aaPredicted RBP18.93■□□□□ 0.62
SYDE1-204ENST00000600440 NPHP3Q7Z494 1330 aa18.93■□□□□ 0.62
SYDE1-204ENST00000600440 YEATS2Q9ULM3 1422 aa18.92■□□□□ 0.62
SYDE1-204ENST00000600440 KIAA0232Q92628 1395 aa18.92■□□□□ 0.62
SYDE1-204ENST00000600440 UBTFL1P0CB47 393 aaPredicted RBP18.92■□□□□ 0.62
SYDE1-204ENST00000600440 DNAI1Q9UI46 699 aa18.92■□□□□ 0.62
SYDE1-204ENST00000600440 AOPEPQ8N6M6 819 aa18.92■□□□□ 0.62
SYDE1-204ENST00000600440 ZFYVE9O95405 1425 aa18.92■□□□□ 0.62
SYDE1-204ENST00000600440 LCMT1Q9UIC8 334 aa18.92■□□□□ 0.62
SYDE1-204ENST00000600440 ZKSCAN1P17029 563 aaPredicted RBP18.91■□□□□ 0.62
SYDE1-204ENST00000600440 COG3Q96JB2 828 aa18.91■□□□□ 0.62
SYDE1-204ENST00000600440 FTOQ9C0B1 505 aaKnown RBP eCLIP18.91■□□□□ 0.62
SYDE1-204ENST00000600440 STAP2Q9UGK3 403 aa18.91■□□□□ 0.62
SYDE1-204ENST00000600440 TAOK2Q9UL54 1235 aa18.91■□□□□ 0.62
SYDE1-204ENST00000600440 URI1O94763 535 aaPredicted RBP18.91■□□□□ 0.62
SYDE1-204ENST00000600440 RASSF4Q9H2L5 321 aa18.91■□□□□ 0.62
SYDE1-204ENST00000600440 SH2B1Q9NRF2 756 aaPredicted RBP18.91■□□□□ 0.62
SYDE1-204ENST00000600440 YTHDC2Q9H6S0 1430 aaKnown RBP18.91■□□□□ 0.62
SYDE1-204ENST00000600440 ATP7AQ04656 1500 aa18.9■□□□□ 0.62
SYDE1-204ENST00000600440 H3BQV1 296 aa18.9■□□□□ 0.62
SYDE1-204ENST00000600440 SRGAP3O43295 1099 aa18.9■□□□□ 0.62
SYDE1-204ENST00000600440 FLIIQ13045 1269 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms