RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 FSTL1Q12841 308 aa24.34■■□□□ 1.49
CCDC9-205ENST00000600117 COL13A1Q5TAT6 717 aaPredicted RBP24.34■■□□□ 1.49
CCDC9-205ENST00000600117 RTCBQ9Y3I0 505 aaKnown RBP24.34■■□□□ 1.49
CCDC9-205ENST00000600117 A1BGP04217 495 aa24.33■■□□□ 1.49
CCDC9-205ENST00000600117 TWISTNBQ3B726 338 aaPredicted RBP24.33■■□□□ 1.49
CCDC9-205ENST00000600117 ZBTB1Q9Y2K1 713 aa24.33■■□□□ 1.49
CCDC9-205ENST00000600117 NBPF26B4DH59 902 aa24.32■■□□□ 1.48
CCDC9-205ENST00000600117 VAMP4O75379 141 aa24.32■■□□□ 1.48
CCDC9-205ENST00000600117 C9orf131Q5VYM1 1079 aa24.32■■□□□ 1.48
CCDC9-205ENST00000600117 NBPF10Q6P3W6 841 aaKnown RBP24.32■■□□□ 1.48
CCDC9-205ENST00000600117 NBPF15Q8N660 670 aa24.32■■□□□ 1.48
CCDC9-205ENST00000600117 ADRA2BP18089 450 aa24.31■■□□□ 1.48
CCDC9-205ENST00000600117 EIF2S2P20042 333 aaKnown RBP24.31■■□□□ 1.48
CCDC9-205ENST00000600117 HTRA3P83110 453 aa24.31■■□□□ 1.48
CCDC9-205ENST00000600117 RPS6KA4O75676 772 aa24.3■■□□□ 1.48
CCDC9-205ENST00000600117 PDIA6Q15084 440 aa24.3■■□□□ 1.48
CCDC9-205ENST00000600117 HDGFL1Q5TGJ6 251 aa24.3■■□□□ 1.48
CCDC9-205ENST00000600117 ERBB4Q15303 1308 aa24.3■■□□□ 1.48
CCDC9-205ENST00000600117 PIP4K2AP48426 406 aaPredicted RBP24.29■■□□□ 1.48
CCDC9-205ENST00000600117 NECTIN2Q92692 538 aa24.29■■□□□ 1.48
CCDC9-205ENST00000600117 ARHGEF1Q92888 912 aaKnown RBP24.29■■□□□ 1.48
CCDC9-205ENST00000600117 PARP3Q9Y6F1 533 aa24.29■■□□□ 1.48
CCDC9-205ENST00000600117 KDM2BQ8NHM5 1336 aa24.29■■□□□ 1.48
CCDC9-205ENST00000600117 GYS1P13807 737 aa24.28■■□□□ 1.48
CCDC9-205ENST00000600117 KCNA3P22001 575 aa24.28■■□□□ 1.48
CCDC9-205ENST00000600117 CANXP27824 592 aaKnown RBP24.28■■□□□ 1.48
CCDC9-205ENST00000600117 LRP10Q7Z4F1 713 aa24.27■■□□□ 1.48
CCDC9-205ENST00000600117 RFC4P35249 363 aa24.26■■□□□ 1.47
CCDC9-205ENST00000600117 IL6STP40189 918 aaPredicted RBP24.26■■□□□ 1.47
CCDC9-205ENST00000600117 EIF5P55010 431 aaKnown RBP24.26■■□□□ 1.47
CCDC9-205ENST00000600117 PROSER3Q2NL68 480 aa24.26■■□□□ 1.47
CCDC9-205ENST00000600117 TNRC6CQ9HCJ0 1690 aaKnown RBP24.26■■□□□ 1.47
CCDC9-205ENST00000600117 PIM2Q9P1W9 311 aa24.25■■□□□ 1.47
CCDC9-205ENST00000600117 CHPF2Q9P2E5 772 aa24.25■■□□□ 1.47
CCDC9-205ENST00000600117 SBF1O95248 1867 aa24.25■■□□□ 1.47
CCDC9-205ENST00000600117 CAPN15O75808 1086 aa24.24■■□□□ 1.47
CCDC9-205ENST00000600117 ANXA1P04083 346 aa24.24■■□□□ 1.47
CCDC9-205ENST00000600117 CCDC30Q5VVM6 783 aa24.24■■□□□ 1.47
CCDC9-205ENST00000600117 TNS4Q8IZW8 715 aa24.24■■□□□ 1.47
CCDC9-205ENST00000600117 DDX21Q9NR30 783 aaKnown RBP eCLIP24.24■■□□□ 1.47
CCDC9-205ENST00000600117 COL15A1P39059 1388 aa24.24■■□□□ 1.47
CCDC9-205ENST00000600117 CT47B1P0C2W7 299 aaPredicted RBP24.23■■□□□ 1.47
CCDC9-205ENST00000600117 CHMP4AQ9BY43 222 aa24.23■■□□□ 1.47
CCDC9-205ENST00000600117 TCERG1O14776 1098 aaKnown RBP24.22■■□□□ 1.47
CCDC9-205ENST00000600117 MYL6BP14649 208 aa24.22■■□□□ 1.47
CCDC9-205ENST00000600117 PRELPP51888 382 aa24.22■■□□□ 1.47
CCDC9-205ENST00000600117 DALRD3Q5D0E6 543 aaKnown RBP24.22■■□□□ 1.47
CCDC9-205ENST00000600117 RNF181Q9P0P0 153 aa24.22■■□□□ 1.47
CCDC9-205ENST00000600117 DBF4Q9UBU7 674 aaPredicted RBP24.22■■□□□ 1.47
CCDC9-205ENST00000600117 RRAGCQ9HB90 399 aa24.21■■□□□ 1.47
CCDC9-205ENST00000600117 SMC1BQ8NDV3 1235 aa24.19■■□□□ 1.46
CCDC9-205ENST00000600117 ZNF428Q96B54 188 aa24.19■■□□□ 1.46
CCDC9-205ENST00000600117 ZNF330Q9Y3S2 320 aaPredicted RBP24.19■■□□□ 1.46
CCDC9-205ENST00000600117 HYPKQ9NX55 129 aa24.18■■□□□ 1.46
CCDC9-205ENST00000600117 CACNA1FO60840 1977 aa24.18■■□□□ 1.46
CCDC9-205ENST00000600117 A0A087WZG4 1122 aa24.17■■□□□ 1.46
CCDC9-205ENST00000600117 SSH1Q8WYL5 1049 aa24.17■■□□□ 1.46
CCDC9-205ENST00000600117 STK31Q9BXU1 1019 aa24.17■■□□□ 1.46
CCDC9-205ENST00000600117 USP42Q9H9J4 1324 aaKnown RBP24.16■■□□□ 1.46
CCDC9-205ENST00000600117 SCN7AQ01118 1682 aa24.16■■□□□ 1.46
CCDC9-205ENST00000600117 TTLL7Q6ZT98 887 aa24.16■■□□□ 1.46
CCDC9-205ENST00000600117 XAGE3Q8WTP9 111 aa24.16■■□□□ 1.46
CCDC9-205ENST00000600117 PHAXQ9H814 394 aaKnown RBP24.16■■□□□ 1.46
CCDC9-205ENST00000600117 BCORQ6W2J9 1755 aa24.16■■□□□ 1.46
CCDC9-205ENST00000600117 ZC3H4Q9UPT8 1303 aaKnown RBP24.15■■□□□ 1.46
CCDC9-205ENST00000600117 SLC4A2P04920 1241 aa24.15■■□□□ 1.46
CCDC9-205ENST00000600117 ALDH1L2Q3SY69 923 aa24.15■■□□□ 1.46
CCDC9-205ENST00000600117 COPS6Q7L5N1 327 aa24.15■■□□□ 1.46
CCDC9-205ENST00000600117 DZIP3Q86Y13 1208 aaKnown RBP24.15■■□□□ 1.46
CCDC9-205ENST00000600117 SRP68Q9UHB9 627 aaKnown RBP24.15■■□□□ 1.46
CCDC9-205ENST00000600117 NARFQ9UHQ1 456 aa24.15■■□□□ 1.46
CCDC9-205ENST00000600117 TBC1D2BQ9UPU7 963 aa24.15■■□□□ 1.46
CCDC9-205ENST00000600117 CAMTA2O94983 1202 aa24.14■■□□□ 1.45
CCDC9-205ENST00000600117 RARSP54136 660 aaKnown RBP24.14■■□□□ 1.45
CCDC9-205ENST00000600117 DDR1Q08345 913 aa24.14■■□□□ 1.45
CCDC9-205ENST00000600117 G2E3Q7L622 706 aa24.14■■□□□ 1.45
CCDC9-205ENST00000600117 MRPL50Q8N5N7 158 aaKnown RBP24.14■■□□□ 1.45
CCDC9-205ENST00000600117 FKBP8Q14318 412 aa24.13■■□□□ 1.45
CCDC9-205ENST00000600117 NPM2Q86SE8 214 aaKnown RBP24.13■■□□□ 1.45
CCDC9-205ENST00000600117 BCL2L12Q9HB09 334 aa24.13■■□□□ 1.45
CCDC9-205ENST00000600117 CHRNA5P30532 468 aa24.12■■□□□ 1.45
CCDC9-205ENST00000600117 AIMP1Q12904 312 aaKnown RBP24.12■■□□□ 1.45
CCDC9-205ENST00000600117 BCL2L13Q9BXK5 485 aa24.12■■□□□ 1.45
CCDC9-205ENST00000600117 MAP3K15Q6ZN16 1313 aa24.11■■□□□ 1.45
CCDC9-205ENST00000600117 USPL1Q5W0Q7 1092 aa24.11■■□□□ 1.45
CCDC9-205ENST00000600117 ZPR1O75312 459 aa24.1■■□□□ 1.45
CCDC9-205ENST00000600117 FLIIQ13045 1269 aa24.1■■□□□ 1.45
CCDC9-205ENST00000600117 SMC4Q9NTJ3 1288 aa24.1■■□□□ 1.45
CCDC9-205ENST00000600117 ERVV-1B6SEH8 477 aa24.09■■□□□ 1.45
CCDC9-205ENST00000600117 HSPA1AP0DMV8 641 aaKnown RBP24.09■■□□□ 1.45
CCDC9-205ENST00000600117 HSPA1BP0DMV9 641 aaKnown RBP24.09■■□□□ 1.45
CCDC9-205ENST00000600117 BRPF1P55201 1214 aaPredicted RBP24.09■■□□□ 1.45
CCDC9-205ENST00000600117 KIF6Q6ZMV9 814 aa24.09■■□□□ 1.45
CCDC9-205ENST00000600117 RGL2O15211 777 aa24.08■■□□□ 1.45
CCDC9-205ENST00000600117 VEGFAP15692 232 aaPredicted RBP24.08■■□□□ 1.45
CCDC9-205ENST00000600117 HLFQ16534 295 aa24.08■■□□□ 1.45
CCDC9-205ENST00000600117 ZBTB3Q9H5J0 574 aa24.08■■□□□ 1.45
CCDC9-205ENST00000600117 ARFGEF2Q9Y6D5 1785 aa24.07■■□□□ 1.44
CCDC9-205ENST00000600117 POLRMTO00411 1230 aaKnown RBP24.07■■□□□ 1.44
CCDC9-205ENST00000600117 TM4SF1P30408 202 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms