RNA–Protein interactions for RNA: ENST00000599689.1

SHD-204, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 5 BASIC

Gene SHD, Length 1,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-204ENST00000599689 ZNF496Q96IT1 587 aaPredicted RBP28.76■■■□□ 2.19
SHD-204ENST00000599689 PDGFDQ9GZP0 370 aaPredicted RBP28.76■■■□□ 2.19
SHD-204ENST00000599689 DDX21Q9NR30 783 aaKnown RBP eCLIP28.75■■■□□ 2.19
SHD-204ENST00000599689 PI4KAP2A4QPH2 592 aa28.74■■■□□ 2.19
SHD-204ENST00000599689 PROSER3Q2NL68 480 aa28.74■■■□□ 2.19
SHD-204ENST00000599689 NPM2Q86SE8 214 aaKnown RBP28.74■■■□□ 2.19
SHD-204ENST00000599689 PI4KAP1Q8N8J0 262 aa28.74■■■□□ 2.19
SHD-204ENST00000599689 SRCIN1Q9C0H9 1055 aa28.74■■■□□ 2.19
SHD-204ENST00000599689 LY75O60449 1722 aa28.74■■■□□ 2.19
SHD-204ENST00000599689 ADCY9O60503 1353 aa28.74■■■□□ 2.19
SHD-204ENST00000599689 HMMRO75330 724 aa28.74■■■□□ 2.19
SHD-204ENST00000599689 FMNL2Q96PY5 1086 aa28.74■■■□□ 2.19
SHD-204ENST00000599689 SNRPA1P09661 255 aaKnown RBP28.73■■■□□ 2.19
SHD-204ENST00000599689 HMGB2P26583 209 aaKnown RBP28.73■■■□□ 2.19
SHD-204ENST00000599689 USP44Q9H0E7 712 aa28.72■■■□□ 2.19
SHD-204ENST00000599689 MSH5O43196 834 aa28.72■■■□□ 2.19
SHD-204ENST00000599689 PDIA6Q15084 440 aa28.72■■■□□ 2.19
SHD-204ENST00000599689 BEND3Q5T5X7 828 aa28.72■■■□□ 2.19
SHD-204ENST00000599689 CASZ1Q86V15 1759 aa28.71■■■□□ 2.19
SHD-204ENST00000599689 LAMB4A4D0S4 1761 aa28.7■■■□□ 2.19
SHD-204ENST00000599689 KSR2Q6VAB6 950 aa28.7■■■□□ 2.19
SHD-204ENST00000599689 UBR2Q8IWV8 1755 aa28.7■■■□□ 2.18
SHD-204ENST00000599689 ZBTB7AO95365 584 aa28.69■■■□□ 2.18
SHD-204ENST00000599689 IPO9Q96P70 1041 aaKnown RBP28.69■■■□□ 2.18
SHD-204ENST00000599689 ITGB4P16144 1822 aa28.69■■■□□ 2.18
SHD-204ENST00000599689 TFCP2L1Q9NZI6 479 aa28.69■■■□□ 2.18
SHD-204ENST00000599689 UBTFL1P0CB47 393 aaPredicted RBP28.68■■■□□ 2.18
SHD-204ENST00000599689 ATP8B2P98198 1209 aa28.67■■■□□ 2.18
SHD-204ENST00000599689 ASAP1Q9ULH1 1129 aa28.67■■■□□ 2.18
SHD-204ENST00000599689 MAP3K2Q9Y2U5 619 aa28.67■■■□□ 2.18
SHD-204ENST00000599689 DDX58O95786 925 aaKnown RBP28.66■■■□□ 2.18
SHD-204ENST00000599689 LRRFIP2Q9Y608 721 aaKnown RBP28.66■■■□□ 2.18
SHD-204ENST00000599689 MTFR1LQ9H019 292 aa28.66■■■□□ 2.18
SHD-204ENST00000599689 USP16Q9Y5T5 823 aa28.66■■■□□ 2.18
SHD-204ENST00000599689 ATG3Q9NT62 314 aa28.65■■■□□ 2.18
SHD-204ENST00000599689 ZBTB47Q9UFB7 747 aaPredicted RBP28.65■■■□□ 2.18
SHD-204ENST00000599689 LOC102724428A0A0B4J2F2 783 aa28.64■■■□□ 2.18
SHD-204ENST00000599689 ALDH1L1O75891 902 aa28.64■■■□□ 2.18
SHD-204ENST00000599689 SIK1P57059 783 aa28.64■■■□□ 2.18
SHD-204ENST00000599689 PNPLA7Q6ZV29 1317 aa28.63■■■□□ 2.17
SHD-204ENST00000599689 PPP1R1BQ9UD71 204 aaPredicted RBP28.63■■■□□ 2.17
SHD-204ENST00000599689 ATF5Q9Y2D1 282 aaPredicted RBP28.63■■■□□ 2.17
SHD-204ENST00000599689 KCPQ6ZWJ8 1503 aa28.62■■■□□ 2.17
SHD-204ENST00000599689 SEC24BO95487 1268 aa28.61■■■□□ 2.17
SHD-204ENST00000599689 SLC16A10Q8TF71 515 aa28.61■■■□□ 2.17
SHD-204ENST00000599689 MYL6BP14649 208 aa28.6■■■□□ 2.17
SHD-204ENST00000599689 PTGER2P43116 358 aa28.6■■■□□ 2.17
SHD-204ENST00000599689 AIMP1Q12904 312 aaKnown RBP28.6■■■□□ 2.17
SHD-204ENST00000599689 BMP2KLQ5H9B9 411 aa28.6■■■□□ 2.17
SHD-204ENST00000599689 PNMA6EA0A0J9YXQ4 647 aa28.59■■■□□ 2.17
SHD-204ENST00000599689 LRP10Q7Z4F1 713 aa28.59■■■□□ 2.17
SHD-204ENST00000599689 XAGE3Q8WTP9 111 aa28.59■■■□□ 2.17
SHD-204ENST00000599689 NBPF7P0C2Y1 421 aaPredicted RBP28.58■■■□□ 2.17
SHD-204ENST00000599689 LINS1Q8NG48 757 aa28.58■■■□□ 2.17
SHD-204ENST00000599689 ERBB4Q15303 1308 aa28.58■■■□□ 2.17
SHD-204ENST00000599689 ATP6V1AP38606 617 aa28.57■■■□□ 2.16
SHD-204ENST00000599689 COPS6Q7L5N1 327 aa28.57■■■□□ 2.16
SHD-204ENST00000599689 RIC3Q7Z5B4 369 aa28.57■■■□□ 2.16
SHD-204ENST00000599689 PLEKHM2Q8IWE5 1019 aa28.57■■■□□ 2.16
SHD-204ENST00000599689 QSER1Q2KHR3 1735 aa28.57■■■□□ 2.16
SHD-204ENST00000599689 SSH3Q8TE77 659 aa28.56■■■□□ 2.16
SHD-204ENST00000599689 DDRGK1Q96HY6 314 aa28.56■■■□□ 2.16
SHD-204ENST00000599689 SGIP1Q9BQI5 828 aa28.56■■■□□ 2.16
SHD-204ENST00000599689 IBTKQ9P2D0 1353 aaPredicted RBP28.55■■■□□ 2.16
SHD-204ENST00000599689 ITPK1Q13572 414 aa28.55■■■□□ 2.16
SHD-204ENST00000599689 LINC00116Q8NCU8 138 aa28.55■■■□□ 2.16
SHD-204ENST00000599689 FLAD1Q8NFF5 587 aa28.55■■■□□ 2.16
SHD-204ENST00000599689 AK7Q96M32 723 aa28.55■■■□□ 2.16
SHD-204ENST00000599689 HDAC5Q9UQL6 1122 aa28.55■■■□□ 2.16
SHD-204ENST00000599689 APBB1O00213 710 aa28.54■■■□□ 2.16
SHD-204ENST00000599689 SMARCA5O60264 1052 aaPredicted RBP28.54■■■□□ 2.16
SHD-204ENST00000599689 COL23A1Q86Y22 540 aaPredicted RBP28.54■■■□□ 2.16
SHD-204ENST00000599689 C16orf71Q8IYS4 520 aaPredicted RBP28.54■■■□□ 2.16
SHD-204ENST00000599689 C9orf78Q9NZ63 289 aaPredicted RBP28.54■■■□□ 2.16
SHD-204ENST00000599689 POLA2Q14181 598 aa28.53■■■□□ 2.16
SHD-204ENST00000599689 CWF19L2Q2TBE0 894 aaKnown RBP28.53■■■□□ 2.16
SHD-204ENST00000599689 RBM42Q9BTD8 480 aaKnown RBP28.53■■■□□ 2.16
SHD-204ENST00000599689 UPF2Q9HAU5 1272 aaKnown RBP28.53■■■□□ 2.16
SHD-204ENST00000599689 EXOC6BQ9Y2D4 811 aa28.53■■■□□ 2.16
SHD-204ENST00000599689 ANKRD13DQ6ZTN6 518 aa28.52■■■□□ 2.16
SHD-204ENST00000599689 PPP1R42Q7Z4L9 355 aa28.52■■■□□ 2.16
SHD-204ENST00000599689 METTL22Q9BUU2 404 aaPredicted RBP28.52■■■□□ 2.16
SHD-204ENST00000599689 C4BP0C0L5 1744 aa28.52■■■□□ 2.16
SHD-204ENST00000599689 NEXNQ0ZGT2 675 aa28.52■■■□□ 2.16
SHD-204ENST00000599689 NOP58Q9Y2X3 529 aaKnown RBP28.52■■■□□ 2.16
SHD-204ENST00000599689 UTYO14607 1347 aa28.51■■■□□ 2.16
SHD-204ENST00000599689 ARFGEF2Q9Y6D5 1785 aa28.51■■■□□ 2.15
SHD-204ENST00000599689 TAF1LQ8IZX4 1826 aa28.51■■■□□ 2.15
SHD-204ENST00000599689 PTCD1O75127 700 aaKnown RBP28.51■■■□□ 2.15
SHD-204ENST00000599689 PIP4K2AP48426 406 aaPredicted RBP28.51■■■□□ 2.15
SHD-204ENST00000599689 SLC4A9Q96Q91 983 aa28.51■■■□□ 2.15
SHD-204ENST00000599689 TUBGCP6Q96RT7 1819 aa28.49■■■□□ 2.15
SHD-204ENST00000599689 IGKV5-2P06315 115 aa28.49■■■□□ 2.15
SHD-204ENST00000599689 LRRCC1Q9C099 1032 aa28.49■■■□□ 2.15
SHD-204ENST00000599689 NBPF26B4DH59 902 aa28.49■■■□□ 2.15
SHD-204ENST00000599689 GRM8O00222 908 aa28.49■■■□□ 2.15
SHD-204ENST00000599689 NBPF10Q6P3W6 841 aaKnown RBP28.49■■■□□ 2.15
SHD-204ENST00000599689 NBPF15Q8N660 670 aa28.49■■■□□ 2.15
SHD-204ENST00000599689 OTUD7AQ8TE49 926 aaPredicted RBP28.49■■■□□ 2.15
SHD-204ENST00000599689 MTX1Q13505 466 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms