RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 ARXQ96QS3 562 aa27.79■■■□□ 2.04
LTBP4-224ENST00000599016 ANKRD13DQ6ZTN6 518 aa27.78■■■□□ 2.04
LTBP4-224ENST00000599016 FTSJ3Q8IY81 847 aaKnown RBP27.78■■■□□ 2.04
LTBP4-224ENST00000599016 TRIM27P14373 513 aa27.77■■■□□ 2.04
LTBP4-224ENST00000599016 KSR2Q6VAB6 950 aa27.77■■■□□ 2.04
LTBP4-224ENST00000599016 TTLL7Q6ZT98 887 aa27.77■■■□□ 2.04
LTBP4-224ENST00000599016 RIC3Q7Z5B4 369 aa27.77■■■□□ 2.04
LTBP4-224ENST00000599016 DZIP1LQ8IYY4 767 aaKnown RBP27.77■■■□□ 2.04
LTBP4-224ENST00000599016 DZIP3Q86Y13 1208 aaKnown RBP27.76■■■□□ 2.03
LTBP4-224ENST00000599016 PLBD2Q8NHP8 589 aa27.76■■■□□ 2.03
LTBP4-224ENST00000599016 UTRNP46939 3433 aa27.76■■■□□ 2.03
LTBP4-224ENST00000599016 PI4KAP2A4QPH2 592 aa27.75■■■□□ 2.03
LTBP4-224ENST00000599016 ADRA2BP18089 450 aa27.75■■■□□ 2.03
LTBP4-224ENST00000599016 PDE3AQ14432 1141 aa27.75■■■□□ 2.03
LTBP4-224ENST00000599016 TRAPPC3LQ5T215 181 aa27.75■■■□□ 2.03
LTBP4-224ENST00000599016 PI4KAP1Q8N8J0 262 aa27.75■■■□□ 2.03
LTBP4-224ENST00000599016 AKT1S1Q96B36 256 aa27.75■■■□□ 2.03
LTBP4-224ENST00000599016 STK32BQ9NY57 414 aa27.75■■■□□ 2.03
LTBP4-224ENST00000599016 ARFGEF2Q9Y6D5 1785 aa27.75■■■□□ 2.03
LTBP4-224ENST00000599016 CASZ1Q86V15 1759 aa27.74■■■□□ 2.03
LTBP4-224ENST00000599016 SSFA2P28290 1259 aa27.74■■■□□ 2.03
LTBP4-224ENST00000599016 DNAAF4Q8WXU2 420 aa27.74■■■□□ 2.03
LTBP4-224ENST00000599016 CLUAP1Q96AJ1 413 aa27.74■■■□□ 2.03
LTBP4-224ENST00000599016 TFCP2L1Q9NZI6 479 aa27.74■■■□□ 2.03
LTBP4-224ENST00000599016 MAP3K15Q6ZN16 1313 aa27.73■■■□□ 2.03
LTBP4-224ENST00000599016 TBC1D2BQ9UPU7 963 aa27.73■■■□□ 2.03
LTBP4-224ENST00000599016 MAP3K2Q9Y2U5 619 aa27.73■■■□□ 2.03
LTBP4-224ENST00000599016 ADCY9O60503 1353 aa27.73■■■□□ 2.03
LTBP4-224ENST00000599016 TUBGCP6Q96RT7 1819 aa27.72■■■□□ 2.03
LTBP4-224ENST00000599016 F6X3S4 739 aa27.72■■■□□ 2.03
LTBP4-224ENST00000599016 PHF14O94880 888 aa27.72■■■□□ 2.03
LTBP4-224ENST00000599016 ZNF827Q17R98 1081 aa27.72■■■□□ 2.03
LTBP4-224ENST00000599016 FLAD1Q8NFF5 587 aa27.72■■■□□ 2.03
LTBP4-224ENST00000599016 ZBTB3Q9H5J0 574 aa27.72■■■□□ 2.03
LTBP4-224ENST00000599016 TNNQ9UQP3 1299 aa27.72■■■□□ 2.03
LTBP4-224ENST00000599016 ABCC4O15439 1325 aa27.71■■■□□ 2.03
LTBP4-224ENST00000599016 ERVV-1B6SEH8 477 aa27.71■■■□□ 2.03
LTBP4-224ENST00000599016 NEFLP07196 543 aa27.71■■■□□ 2.03
LTBP4-224ENST00000599016 SLC4A10Q6U841 1118 aa27.71■■■□□ 2.03
LTBP4-224ENST00000599016 SYT17Q9BSW7 474 aa27.71■■■□□ 2.03
LTBP4-224ENST00000599016 FHDC1Q9C0D6 1143 aaPredicted RBP27.71■■■□□ 2.03
LTBP4-224ENST00000599016 NUP98P52948 1817 aa27.71■■■□□ 2.03
LTBP4-224ENST00000599016 BCORQ6W2J9 1755 aa27.71■■■□□ 2.03
LTBP4-224ENST00000599016 PXDNLA1KZ92 1463 aa27.7■■■□□ 2.03
LTBP4-224ENST00000599016 C4AP0C0L4 1744 aa27.7■■■□□ 2.03
LTBP4-224ENST00000599016 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.7■■■□□ 2.02
LTBP4-224ENST00000599016 RFC4P35249 363 aa27.7■■■□□ 2.02
LTBP4-224ENST00000599016 NEXNQ0ZGT2 675 aa27.7■■■□□ 2.02
LTBP4-224ENST00000599016 SLC15A2Q16348 729 aa27.7■■■□□ 2.02
LTBP4-224ENST00000599016 ARHGEF1Q92888 912 aaKnown RBP27.7■■■□□ 2.02
LTBP4-224ENST00000599016 QSER1Q2KHR3 1735 aa27.7■■■□□ 2.02
LTBP4-224ENST00000599016 N4BP2Q86UW6 1770 aaPredicted RBP27.69■■■□□ 2.02
LTBP4-224ENST00000599016 ZPR1O75312 459 aa27.69■■■□□ 2.02
LTBP4-224ENST00000599016 PANK1Q8TE04 598 aa27.69■■■□□ 2.02
LTBP4-224ENST00000599016 METTL22Q9BUU2 404 aaPredicted RBP27.69■■■□□ 2.02
LTBP4-224ENST00000599016 CCT4P50991 539 aaKnown RBP27.68■■■□□ 2.02
LTBP4-224ENST00000599016 HSP90AB3PQ58FF7 597 aa27.68■■■□□ 2.02
LTBP4-224ENST00000599016 NARFQ9UHQ1 456 aa27.68■■■□□ 2.02
LTBP4-224ENST00000599016 SCN7AQ01118 1682 aa27.68■■■□□ 2.02
LTBP4-224ENST00000599016 CAMTA2O94983 1202 aa27.67■■■□□ 2.02
LTBP4-224ENST00000599016 C20orf194Q5TEA3 1177 aa27.67■■■□□ 2.02
LTBP4-224ENST00000599016 GIGYF2Q6Y7W6 1299 aaKnown RBP27.67■■■□□ 2.02
LTBP4-224ENST00000599016 SMIM5Q71RC9 77 aa27.67■■■□□ 2.02
LTBP4-224ENST00000599016 ZNF652Q9Y2D9 606 aa27.67■■■□□ 2.02
LTBP4-224ENST00000599016 ANKRD36CQ5JPF3 1778 aa27.66■■■□□ 2.02
LTBP4-224ENST00000599016 RGL2O15211 777 aa27.66■■■□□ 2.02
LTBP4-224ENST00000599016 RLBP1P12271 317 aa27.66■■■□□ 2.02
LTBP4-224ENST00000599016 AMIGO3Q86WK7 504 aa27.66■■■□□ 2.02
LTBP4-224ENST00000599016 TMEM57Q8N5G2 664 aa27.66■■■□□ 2.02
LTBP4-224ENST00000599016 AFDNP55196 1824 aaKnown RBP27.66■■■□□ 2.02
LTBP4-224ENST00000599016 ATP10DQ9P241 1426 aa27.66■■■□□ 2.02
LTBP4-224ENST00000599016 INTS3Q68E01 1043 aaKnown RBP27.65■■■□□ 2.02
LTBP4-224ENST00000599016 MYD88Q99836 296 aa27.65■■■□□ 2.02
LTBP4-224ENST00000599016 SGIP1Q9BQI5 828 aa27.65■■■□□ 2.02
LTBP4-224ENST00000599016 SRCIN1Q9C0H9 1055 aa27.65■■■□□ 2.02
LTBP4-224ENST00000599016 ITPRIPQ8IWB1 547 aa27.64■■■□□ 2.02
LTBP4-224ENST00000599016 MSH5O43196 834 aa27.63■■■□□ 2.01
LTBP4-224ENST00000599016 TCIRG1Q13488 830 aa27.63■■■□□ 2.01
LTBP4-224ENST00000599016 HLFQ16534 295 aa27.63■■■□□ 2.01
LTBP4-224ENST00000599016 BEND3Q5T5X7 828 aa27.63■■■□□ 2.01
LTBP4-224ENST00000599016 USPL1Q5W0Q7 1092 aa27.63■■■□□ 2.01
LTBP4-224ENST00000599016 CLEC4GQ6UXB4 293 aa27.63■■■□□ 2.01
LTBP4-224ENST00000599016 LINS1Q8NG48 757 aa27.63■■■□□ 2.01
LTBP4-224ENST00000599016 COG6Q9Y2V7 657 aa27.63■■■□□ 2.01
LTBP4-224ENST00000599016 USP42Q9H9J4 1324 aaKnown RBP27.63■■■□□ 2.01
LTBP4-224ENST00000599016 ALDH1L1O75891 902 aa27.62■■■□□ 2.01
LTBP4-224ENST00000599016 C1QTNF8P60827 252 aa27.62■■■□□ 2.01
LTBP4-224ENST00000599016 IRX6P78412 446 aaPredicted RBP27.62■■■□□ 2.01
LTBP4-224ENST00000599016 MVPQ14764 893 aaKnown RBP27.62■■■□□ 2.01
LTBP4-224ENST00000599016 SRP68Q9UHB9 627 aaKnown RBP27.62■■■□□ 2.01
LTBP4-224ENST00000599016 COL23A1Q86Y22 540 aaPredicted RBP27.61■■■□□ 2.01
LTBP4-224ENST00000599016 DDX19BQ9UMR2 479 aa27.61■■■□□ 2.01
LTBP4-224ENST00000599016 PNPLA7Q6ZV29 1317 aa27.61■■■□□ 2.01
LTBP4-224ENST00000599016 CHMP4BQ9H444 224 aaKnown RBP27.6■■■□□ 2.01
LTBP4-224ENST00000599016 CRBNQ96SW2 442 aa27.59■■■□□ 2.01
LTBP4-224ENST00000599016 ATP5J2-PTCD1G3V325 749 aa27.58■■■□□ 2.01
LTBP4-224ENST00000599016 IGKV5-2P06315 115 aa27.58■■■□□ 2.01
LTBP4-224ENST00000599016 ISCA1Q9BUE6 129 aa27.58■■■□□ 2.01
LTBP4-224ENST00000599016 NEURL1BA8MQ27 555 aa27.57■■■□□ 2
LTBP4-224ENST00000599016 TRIM28Q13263 835 aaKnown RBP27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms