RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 LMNB1P20700 586 aa20.06■□□□□ 0.8
TGFB1-202ENST00000597453 CLEC4GQ6UXB4 293 aa20.06■□□□□ 0.8
TGFB1-202ENST00000597453 ZNF219Q9P2Y4 722 aaPredicted RBP20.06■□□□□ 0.8
TGFB1-202ENST00000597453 PDZRN3Q9UPQ7 1066 aa20.06■□□□□ 0.8
TGFB1-202ENST00000597453 NPHP1O15259 732 aa20.05■□□□□ 0.8
TGFB1-202ENST00000597453 ST5P78524 1137 aa20.05■□□□□ 0.8
TGFB1-202ENST00000597453 PNISRQ8TF01 805 aaKnown RBP20.05■□□□□ 0.8
TGFB1-202ENST00000597453 ZNF652Q9Y2D9 606 aa20.05■□□□□ 0.8
TGFB1-202ENST00000597453 DICER1Q9UPY3 1922 aaKnown RBP20.05■□□□□ 0.8
TGFB1-202ENST00000597453 MAPK8IP3Q9UPT6 1336 aa20.04■□□□□ 0.8
TGFB1-202ENST00000597453 C21orf2O43822 256 aa20.04■□□□□ 0.8
TGFB1-202ENST00000597453 RRAGCQ9HB90 399 aa20.04■□□□□ 0.8
TGFB1-202ENST00000597453 ZC3H4Q9UPT8 1303 aaKnown RBP20.03■□□□□ 0.8
TGFB1-202ENST00000597453 SRGNP10124 158 aa20.03■□□□□ 0.8
TGFB1-202ENST00000597453 EIF4A1P60842 406 aaKnown RBP20.03■□□□□ 0.8
TGFB1-202ENST00000597453 DDX10Q13206 875 aaKnown RBP20.03■□□□□ 0.8
TGFB1-202ENST00000597453 RALBP1Q15311 655 aa20.03■□□□□ 0.8
TGFB1-202ENST00000597453 HLFQ16534 295 aa20.03■□□□□ 0.8
TGFB1-202ENST00000597453 NBPF5PQ86XG9 351 aaPredicted RBP20.03■□□□□ 0.8
TGFB1-202ENST00000597453 NUP98P52948 1817 aa20.03■□□□□ 0.8
TGFB1-202ENST00000597453 STYK1Q6J9G0 422 aa20.02■□□□□ 0.8
TGFB1-202ENST00000597453 RBM46Q8TBY0 533 aaKnown RBP20.02■□□□□ 0.8
TGFB1-202ENST00000597453 PNNQ9H307 717 aaKnown RBP20.02■□□□□ 0.8
TGFB1-202ENST00000597453 NIP7Q9Y221 180 aaKnown RBP eCLIP20.02■□□□□ 0.8
TGFB1-202ENST00000597453 RGL2O15211 777 aa20.01■□□□□ 0.79
TGFB1-202ENST00000597453 C16orf71Q8IYS4 520 aaPredicted RBP20.01■□□□□ 0.79
TGFB1-202ENST00000597453 WDR90Q96KV7 1748 aa20■□□□□ 0.79
TGFB1-202ENST00000597453 FAM177BA6PVY3 158 aa20■□□□□ 0.79
TGFB1-202ENST00000597453 PRPF40BQ6NWY9 871 aaKnown RBP20■□□□□ 0.79
TGFB1-202ENST00000597453 NGEFQ8N5V2 710 aa20■□□□□ 0.79
TGFB1-202ENST00000597453 CNKSR1Q969H4 720 aa20■□□□□ 0.79
TGFB1-202ENST00000597453 MASTLQ96GX5 879 aa20■□□□□ 0.79
TGFB1-202ENST00000597453 GLTPD2A6NH11 291 aa19.99■□□□□ 0.79
TGFB1-202ENST00000597453 APLP1P51693 650 aa19.99■□□□□ 0.79
TGFB1-202ENST00000597453 TPTE2Q6XPS3 522 aa19.98■□□□□ 0.79
TGFB1-202ENST00000597453 RRP7AQ9Y3A4 280 aaKnown RBP19.98■□□□□ 0.79
TGFB1-202ENST00000597453 KLRG2A4D1S0 409 aaPredicted RBP19.97■□□□□ 0.79
TGFB1-202ENST00000597453 MYL6BP14649 208 aa19.97■□□□□ 0.79
TGFB1-202ENST00000597453 RIPK4P57078 832 aa19.97■□□□□ 0.79
TGFB1-202ENST00000597453 TTLL7Q6ZT98 887 aa19.97■□□□□ 0.79
TGFB1-202ENST00000597453 TAOK3Q9H2K8 898 aa19.97■□□□□ 0.79
TGFB1-202ENST00000597453 MYBBP1AQ9BQG0 1328 aaKnown RBP19.97■□□□□ 0.79
TGFB1-202ENST00000597453 LTBP3Q9NS15 1303 aa19.97■□□□□ 0.79
TGFB1-202ENST00000597453 FSTL1Q12841 308 aa19.96■□□□□ 0.79
TGFB1-202ENST00000597453 C7orf43Q8WVR3 580 aa19.96■□□□□ 0.79
TGFB1-202ENST00000597453 TSPYL4Q9UJ04 414 aa19.96■□□□□ 0.79
TGFB1-202ENST00000597453 MAP3K15Q6ZN16 1313 aa19.96■□□□□ 0.79
TGFB1-202ENST00000597453 ABCC12Q96J65 1359 aa19.95■□□□□ 0.79
TGFB1-202ENST00000597453 ZNF316A6NFI3 1004 aaPredicted RBP19.95■□□□□ 0.78
TGFB1-202ENST00000597453 NPR1P16066 1061 aa19.95■□□□□ 0.78
TGFB1-202ENST00000597453 TMPOP42166 694 aaKnown RBP19.95■□□□□ 0.78
TGFB1-202ENST00000597453 ERFEQ4G0M1 354 aa19.95■□□□□ 0.78
TGFB1-202ENST00000597453 ERVV-1B6SEH8 477 aa19.94■□□□□ 0.78
TGFB1-202ENST00000597453 HTRA3P83110 453 aa19.94■□□□□ 0.78
TGFB1-202ENST00000597453 KIF6Q6ZMV9 814 aa19.94■□□□□ 0.78
TGFB1-202ENST00000597453 ZBTB3Q9H5J0 574 aa19.94■□□□□ 0.78
TGFB1-202ENST00000597453 POTECB2RU33 542 aa19.93■□□□□ 0.78
TGFB1-202ENST00000597453 VEGFAP15692 232 aaPredicted RBP19.93■□□□□ 0.78
TGFB1-202ENST00000597453 SOGA3Q5TF21 947 aa19.93■□□□□ 0.78
TGFB1-202ENST00000597453 NUTM1Q86Y26 1132 aa19.93■□□□□ 0.78
TGFB1-202ENST00000597453 CCDC146Q8IYE0 955 aa19.93■□□□□ 0.78
TGFB1-202ENST00000597453 DNAJC5GQ8N7S2 189 aa19.93■□□□□ 0.78
TGFB1-202ENST00000597453 GPTP24298 496 aa19.92■□□□□ 0.78
TGFB1-202ENST00000597453 GTF2E1P29083 439 aaPredicted RBP19.92■□□□□ 0.78
TGFB1-202ENST00000597453 OLFM4Q6UX06 510 aa19.92■□□□□ 0.78
TGFB1-202ENST00000597453 SMC1BQ8NDV3 1235 aa19.92■□□□□ 0.78
TGFB1-202ENST00000597453 ERBB4Q15303 1308 aa19.92■□□□□ 0.78
TGFB1-202ENST00000597453 UBN2Q6ZU65 1347 aa19.92■□□□□ 0.78
TGFB1-202ENST00000597453 PDIA6Q15084 440 aa19.91■□□□□ 0.78
TGFB1-202ENST00000597453 CCDC93Q567U6 631 aa19.91■□□□□ 0.78
TGFB1-202ENST00000597453 LRP10Q7Z4F1 713 aa19.91■□□□□ 0.78
TGFB1-202ENST00000597453 LMOD3Q0VAK6 560 aa19.9■□□□□ 0.78
TGFB1-202ENST00000597453 DPY19L2Q6NUT2 758 aa19.9■□□□□ 0.78
TGFB1-202ENST00000597453 NYXQ9GZU5 481 aa19.9■□□□□ 0.78
TGFB1-202ENST00000597453 EIF2S2P20042 333 aaKnown RBP19.89■□□□□ 0.77
TGFB1-202ENST00000597453 NEUROD2Q15784 382 aa19.89■□□□□ 0.77
TGFB1-202ENST00000597453 PROSER3Q2NL68 480 aa19.89■□□□□ 0.77
TGFB1-202ENST00000597453 CRY2Q49AN0 593 aa19.89■□□□□ 0.77
TGFB1-202ENST00000597453 SUSD4Q5VX71 490 aa19.89■□□□□ 0.77
TGFB1-202ENST00000597453 BABAM1Q9NWV8 329 aa19.89■□□□□ 0.77
TGFB1-202ENST00000597453 IBTKQ9P2D0 1353 aaPredicted RBP19.89■□□□□ 0.77
TGFB1-202ENST00000597453 ANKRD36CQ5JPF3 1778 aa19.88■□□□□ 0.77
TGFB1-202ENST00000597453 ANXA1P04083 346 aa19.88■□□□□ 0.77
TGFB1-202ENST00000597453 GIGYF2Q6Y7W6 1299 aaKnown RBP19.88■□□□□ 0.77
TGFB1-202ENST00000597453 ZNF34Q8IZ26 560 aa19.88■□□□□ 0.77
TGFB1-202ENST00000597453 RIC1Q4ADV7 1423 aa19.87■□□□□ 0.77
TGFB1-202ENST00000597453 SNED1Q8TER0 1413 aa19.87■□□□□ 0.77
TGFB1-202ENST00000597453 DDNO94850 711 aaPredicted RBP19.87■□□□□ 0.77
TGFB1-202ENST00000597453 FKBP4Q02790 459 aaKnown RBP eCLIP19.87■□□□□ 0.77
TGFB1-202ENST00000597453 TRIM35Q9UPQ4 493 aa19.87■□□□□ 0.77
TGFB1-202ENST00000597453 NTSR2O95665 410 aa19.86■□□□□ 0.77
TGFB1-202ENST00000597453 ALDH1B1P30837 517 aa19.86■□□□□ 0.77
TGFB1-202ENST00000597453 WDR43Q15061 677 aaKnown RBP eCLIP19.86■□□□□ 0.77
TGFB1-202ENST00000597453 KRT24Q2M2I5 525 aa19.86■□□□□ 0.77
TGFB1-202ENST00000597453 RUNDC1Q96C34 613 aa19.86■□□□□ 0.77
TGFB1-202ENST00000597453 ZNF277Q9NRM2 450 aaPredicted RBP19.86■□□□□ 0.77
TGFB1-202ENST00000597453 C3orf67Q6ZVT6 689 aa19.85■□□□□ 0.77
TGFB1-202ENST00000597453 NECTIN2Q92692 538 aa19.85■□□□□ 0.77
TGFB1-202ENST00000597453 ADAMTS8Q9UP79 889 aa19.85■□□□□ 0.77
TGFB1-202ENST00000597453 CHL1O00533 1208 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms