RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 ANKRD36CQ5JPF3 1778 aa19.32■□□□□ 0.68
TRIM28-207ENST00000597136 MMP10P09238 476 aa19.31■□□□□ 0.68
TRIM28-207ENST00000597136 HLFQ16534 295 aa19.31■□□□□ 0.68
TRIM28-207ENST00000597136 ARFGEF2Q9Y6D5 1785 aa19.31■□□□□ 0.68
TRIM28-207ENST00000597136 POLD1P28340 1107 aa19.3■□□□□ 0.68
TRIM28-207ENST00000597136 TM4SF1P30408 202 aa19.3■□□□□ 0.68
TRIM28-207ENST00000597136 AIMP1Q12904 312 aaKnown RBP19.3■□□□□ 0.68
TRIM28-207ENST00000597136 COPS6Q7L5N1 327 aa19.3■□□□□ 0.68
TRIM28-207ENST00000597136 KIF13BQ9NQT8 1826 aa19.3■□□□□ 0.68
TRIM28-207ENST00000597136 TBC1D9BQ66K14 1250 aa19.29■□□□□ 0.68
TRIM28-207ENST00000597136 BICDL1Q6ZP65 573 aa19.29■□□□□ 0.68
TRIM28-207ENST00000597136 XAGE3Q8WTP9 111 aa19.29■□□□□ 0.68
TRIM28-207ENST00000597136 PHAXQ9H814 394 aaKnown RBP19.29■□□□□ 0.68
TRIM28-207ENST00000597136 DBF4Q9UBU7 674 aaPredicted RBP19.29■□□□□ 0.68
TRIM28-207ENST00000597136 N4BP2Q86UW6 1770 aaPredicted RBP19.29■□□□□ 0.68
TRIM28-207ENST00000597136 DDR1Q08345 913 aa19.28■□□□□ 0.68
TRIM28-207ENST00000597136 NFIXQ14938 502 aa19.28■□□□□ 0.68
TRIM28-207ENST00000597136 ZBTB3Q9H5J0 574 aa19.28■□□□□ 0.68
TRIM28-207ENST00000597136 PPP1R1BQ9UD71 204 aaPredicted RBP19.28■□□□□ 0.68
TRIM28-207ENST00000597136 NRXN2Q9P2S2 1712 aa19.28■□□□□ 0.68
TRIM28-207ENST00000597136 CCDC30Q5VVM6 783 aa19.27■□□□□ 0.68
TRIM28-207ENST00000597136 ANKRD31Q8N7Z5 1873 aa19.27■□□□□ 0.68
TRIM28-207ENST00000597136 MAP3K15Q6ZN16 1313 aa19.26■□□□□ 0.67
TRIM28-207ENST00000597136 GOLGB1Q14789 3259 aaKnown RBP19.26■□□□□ 0.67
TRIM28-207ENST00000597136 G2E3Q7L622 706 aa19.26■□□□□ 0.67
TRIM28-207ENST00000597136 HYPKQ9NX55 129 aa19.26■□□□□ 0.67
TRIM28-207ENST00000597136 POLRMTO00411 1230 aaKnown RBP19.25■□□□□ 0.67
TRIM28-207ENST00000597136 KIF6Q6ZMV9 814 aa19.25■□□□□ 0.67
TRIM28-207ENST00000597136 SLC4A2P04920 1241 aa19.24■□□□□ 0.67
TRIM28-207ENST00000597136 KLHL34Q8N239 644 aa19.24■□□□□ 0.67
TRIM28-207ENST00000597136 FHDC1Q9C0D6 1143 aaPredicted RBP19.24■□□□□ 0.67
TRIM28-207ENST00000597136 KIAA1551Q9HCM1 1747 aa19.24■□□□□ 0.67
TRIM28-207ENST00000597136 ERVV-1B6SEH8 477 aa19.23■□□□□ 0.67
TRIM28-207ENST00000597136 CLEC4GQ6UXB4 293 aa19.23■□□□□ 0.67
TRIM28-207ENST00000597136 PARP3Q9Y6F1 533 aa19.23■□□□□ 0.67
TRIM28-207ENST00000597136 CT47B1P0C2W7 299 aaPredicted RBP19.23■□□□□ 0.67
TRIM28-207ENST00000597136 SERPINB2P05120 415 aa19.22■□□□□ 0.67
TRIM28-207ENST00000597136 GIGYF2Q6Y7W6 1299 aaKnown RBP19.22■□□□□ 0.67
TRIM28-207ENST00000597136 ANKRD13DQ6ZTN6 518 aa19.22■□□□□ 0.67
TRIM28-207ENST00000597136 SYT17Q9BSW7 474 aa19.22■□□□□ 0.67
TRIM28-207ENST00000597136 STK31Q9BXU1 1019 aa19.22■□□□□ 0.67
TRIM28-207ENST00000597136 CACNA1SQ13698 1873 aa19.22■□□□□ 0.67
TRIM28-207ENST00000597136 BRCA1P38398 1863 aaKnown RBP19.21■□□□□ 0.67
TRIM28-207ENST00000597136 GPTP24298 496 aa19.21■□□□□ 0.67
TRIM28-207ENST00000597136 CCDC24Q8N4L8 307 aa19.21■□□□□ 0.67
TRIM28-207ENST00000597136 SETDB2Q96T68 719 aa19.21■□□□□ 0.67
TRIM28-207ENST00000597136 NIP7Q9Y221 180 aaKnown RBP eCLIP19.21■□□□□ 0.67
TRIM28-207ENST00000597136 FAM177BA6PVY3 158 aa19.2■□□□□ 0.66
TRIM28-207ENST00000597136 ZNF428Q96B54 188 aa19.2■□□□□ 0.66
TRIM28-207ENST00000597136 CHMP4AQ9BY43 222 aa19.2■□□□□ 0.66
TRIM28-207ENST00000597136 ZNF652Q9Y2D9 606 aa19.2■□□□□ 0.66
TRIM28-207ENST00000597136 ZNF34Q8IZ26 560 aa19.19■□□□□ 0.66
TRIM28-207ENST00000597136 NLGN2Q8NFZ4 835 aa19.19■□□□□ 0.66
TRIM28-207ENST00000597136 PLBD2Q8NHP8 589 aa19.19■□□□□ 0.66
TRIM28-207ENST00000597136 RCAN3Q9UKA8 241 aa19.19■□□□□ 0.66
TRIM28-207ENST00000597136 UBN2Q6ZU65 1347 aa19.18■□□□□ 0.66
TRIM28-207ENST00000597136 RGL2O15211 777 aa19.18■□□□□ 0.66
TRIM28-207ENST00000597136 TAF1P21675 1872 aa19.17■□□□□ 0.66
TRIM28-207ENST00000597136 LAMB2P55268 1798 aa19.17■□□□□ 0.66
TRIM28-207ENST00000597136 RIC3Q7Z5B4 369 aa19.17■□□□□ 0.66
TRIM28-207ENST00000597136 SSH1Q8WYL5 1049 aa19.17■□□□□ 0.66
TRIM28-207ENST00000597136 ATP10DQ9P241 1426 aa19.17■□□□□ 0.66
TRIM28-207ENST00000597136 CARMIL3Q8ND23 1372 aa19.16■□□□□ 0.66
TRIM28-207ENST00000597136 RARSP54136 660 aaKnown RBP19.16■□□□□ 0.66
TRIM28-207ENST00000597136 FLIIQ13045 1269 aa19.16■□□□□ 0.66
TRIM28-207ENST00000597136 TCIRG1Q13488 830 aa19.16■□□□□ 0.66
TRIM28-207ENST00000597136 PRR5LQ6MZQ0 368 aa19.16■□□□□ 0.66
TRIM28-207ENST00000597136 BCL2L13Q9BXK5 485 aa19.16■□□□□ 0.66
TRIM28-207ENST00000597136 C10orf71Q711Q0 1435 aa19.16■□□□□ 0.66
TRIM28-207ENST00000597136 UTRNP46939 3433 aa19.16■□□□□ 0.66
TRIM28-207ENST00000597136 ADCY9O60503 1353 aa19.16■□□□□ 0.66
TRIM28-207ENST00000597136 DLEC1Q9Y238 1755 aa19.15■□□□□ 0.66
TRIM28-207ENST00000597136 PI4KAP2A4QPH2 592 aa19.15■□□□□ 0.66
TRIM28-207ENST00000597136 ATP5J2-PTCD1G3V325 749 aa19.15■□□□□ 0.66
TRIM28-207ENST00000597136 SUSD4Q5VX71 490 aa19.15■□□□□ 0.66
TRIM28-207ENST00000597136 MRPL50Q8N5N7 158 aaKnown RBP19.15■□□□□ 0.66
TRIM28-207ENST00000597136 PI4KAP1Q8N8J0 262 aa19.15■□□□□ 0.66
TRIM28-207ENST00000597136 CD2APQ9Y5K6 639 aa19.15■□□□□ 0.66
TRIM28-207ENST00000597136 COL11A2P13942 1736 aaPredicted RBP19.15■□□□□ 0.66
TRIM28-207ENST00000597136 NBPF5PQ86XG9 351 aaPredicted RBP19.15■□□□□ 0.66
TRIM28-207ENST00000597136 MAP3K2Q9Y2U5 619 aa19.15■□□□□ 0.66
TRIM28-207ENST00000597136 KSR2Q6VAB6 950 aa19.14■□□□□ 0.65
TRIM28-207ENST00000597136 DDX60Q8IY21 1712 aaKnown RBP19.14■□□□□ 0.65
TRIM28-207ENST00000597136 A0A0G2JLW4 131 aa19.13■□□□□ 0.65
TRIM28-207ENST00000597136 FKBP5Q13451 457 aaPredicted RBP19.13■□□□□ 0.65
TRIM28-207ENST00000597136 ALDH1L2Q3SY69 923 aa19.13■□□□□ 0.65
TRIM28-207ENST00000597136 NLRP10Q86W26 655 aa19.13■□□□□ 0.65
TRIM28-207ENST00000597136 NUTM1Q86Y26 1132 aa19.13■□□□□ 0.65
TRIM28-207ENST00000597136 ISCA1Q9BUE6 129 aa19.13■□□□□ 0.65
TRIM28-207ENST00000597136 WWC3Q9ULE0 1092 aa19.13■□□□□ 0.65
TRIM28-207ENST00000597136 TNRC6CQ9HCJ0 1690 aaKnown RBP19.13■□□□□ 0.65
TRIM28-207ENST00000597136 MYH3P11055 1940 aa19.13■□□□□ 0.65
TRIM28-207ENST00000597136 BCAR3O75815 825 aa19.12■□□□□ 0.65
TRIM28-207ENST00000597136 DDX58O95786 925 aaKnown RBP19.12■□□□□ 0.65
TRIM28-207ENST00000597136 TPTE2Q6XPS3 522 aa19.12■□□□□ 0.65
TRIM28-207ENST00000597136 SYNE4Q8N205 404 aa19.12■□□□□ 0.65
TRIM28-207ENST00000597136 CNBD1Q8NA66 436 aa19.12■□□□□ 0.65
TRIM28-207ENST00000597136 MYD88Q99836 296 aa19.12■□□□□ 0.65
TRIM28-207ENST00000597136 F6X3S4 739 aa19.11■□□□□ 0.65
TRIM28-207ENST00000597136 CHRNA5P30532 468 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms