RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 CFAP44Q96MT7 982 aa13.75□□□□□ -0.21
CCDC9-203ENST00000596938 NIP7Q9Y221 180 aaKnown RBP eCLIP13.75□□□□□ -0.21
CCDC9-203ENST00000596938 NRXN2Q9P2S2 1712 aa13.75□□□□□ -0.21
CCDC9-203ENST00000596938 KLRG2A4D1S0 409 aaPredicted RBP13.74□□□□□ -0.21
CCDC9-203ENST00000596938 EIF2S2P20042 333 aaKnown RBP13.74□□□□□ -0.21
CCDC9-203ENST00000596938 KIF6Q6ZMV9 814 aa13.74□□□□□ -0.21
CCDC9-203ENST00000596938 TTLL7Q6ZT98 887 aa13.74□□□□□ -0.21
CCDC9-203ENST00000596938 LRP10Q7Z4F1 713 aa13.74□□□□□ -0.21
CCDC9-203ENST00000596938 CCDC24Q8N4L8 307 aa13.74□□□□□ -0.21
CCDC9-203ENST00000596938 GPBP1L1Q9HC44 474 aaPredicted RBP13.74□□□□□ -0.21
CCDC9-203ENST00000596938 N4BP2Q86UW6 1770 aaPredicted RBP13.73□□□□□ -0.21
CCDC9-203ENST00000596938 ZNF853P0CG23 659 aa13.73□□□□□ -0.21
CCDC9-203ENST00000596938 SRGNP10124 158 aa13.73□□□□□ -0.21
CCDC9-203ENST00000596938 C1QTNF8P60827 252 aa13.73□□□□□ -0.21
CCDC9-203ENST00000596938 CALD1Q05682 793 aaKnown RBP13.73□□□□□ -0.21
CCDC9-203ENST00000596938 CCDC184Q52MB2 194 aa13.73□□□□□ -0.21
CCDC9-203ENST00000596938 C9orf131Q5VYM1 1079 aa13.73□□□□□ -0.21
CCDC9-203ENST00000596938 STYK1Q6J9G0 422 aa13.73□□□□□ -0.21
CCDC9-203ENST00000596938 ZNF622Q969S3 477 aaKnown RBP eCLIP13.73□□□□□ -0.213e-10■■□□□ 12.3
CCDC9-203ENST00000596938 LAS1LQ9Y4W2 734 aaKnown RBP13.73□□□□□ -0.21
CCDC9-203ENST00000596938 DLG5Q8TDM6 1919 aa13.72□□□□□ -0.21
CCDC9-203ENST00000596938 ANP32CO43423 234 aa13.72□□□□□ -0.21
CCDC9-203ENST00000596938 HOXB7P09629 217 aa13.72□□□□□ -0.21
CCDC9-203ENST00000596938 GIGYF2Q6Y7W6 1299 aaKnown RBP13.72□□□□□ -0.21
CCDC9-203ENST00000596938 CNKSR1Q969H4 720 aa13.72□□□□□ -0.21
CCDC9-203ENST00000596938 MASTLQ96GX5 879 aa13.72□□□□□ -0.21
CCDC9-203ENST00000596938 KDM3BQ7LBC6 1761 aa13.72□□□□□ -0.21
CCDC9-203ENST00000596938 SCN7AQ01118 1682 aa13.72□□□□□ -0.21
CCDC9-203ENST00000596938 ZNF34Q8IZ26 560 aa13.71□□□□□ -0.21
CCDC9-203ENST00000596938 NYXQ9GZU5 481 aa13.71□□□□□ -0.21
CCDC9-203ENST00000596938 ZBTB3Q9H5J0 574 aa13.71□□□□□ -0.21
CCDC9-203ENST00000596938 DDX21Q9NR30 783 aaKnown RBP eCLIP13.71□□□□□ -0.21
CCDC9-203ENST00000596938 GTF2E1P29083 439 aaPredicted RBP13.7□□□□□ -0.22
CCDC9-203ENST00000596938 KRT24Q2M2I5 525 aa13.7□□□□□ -0.22
CCDC9-203ENST00000596938 PROSER3Q2NL68 480 aa13.7□□□□□ -0.22
CCDC9-203ENST00000596938 ZNF526Q8TF50 670 aaPredicted RBP13.7□□□□□ -0.22
CCDC9-203ENST00000596938 IFT57Q9NWB7 429 aa13.7□□□□□ -0.22
CCDC9-203ENST00000596938 AFDNP55196 1824 aaKnown RBP13.69□□□□□ -0.22
CCDC9-203ENST00000596938 FAM177BA6PVY3 158 aa13.69□□□□□ -0.22
CCDC9-203ENST00000596938 NPR1P16066 1061 aa13.69□□□□□ -0.22
CCDC9-203ENST00000596938 GNAI1P63096 354 aa13.69□□□□□ -0.22
CCDC9-203ENST00000596938 NCBP3Q53F19 620 aaKnown RBP13.69□□□□□ -0.22
CCDC9-203ENST00000596938 COPS6Q7L5N1 327 aa13.69□□□□□ -0.22
CCDC9-203ENST00000596938 MBIPQ9NS73 344 aa13.69□□□□□ -0.22
CCDC9-203ENST00000596938 RNF181Q9P0P0 153 aa13.69□□□□□ -0.22
CCDC9-203ENST00000596938 C21orf2O43822 256 aa13.68□□□□□ -0.22
CCDC9-203ENST00000596938 ANXA1P04083 346 aa13.68□□□□□ -0.22
CCDC9-203ENST00000596938 LMNB1P20700 586 aa13.68□□□□□ -0.22
CCDC9-203ENST00000596938 CCDC27Q2M243 656 aa13.68□□□□□ -0.22
CCDC9-203ENST00000596938 PARP10Q53GL7 1025 aa13.68□□□□□ -0.22
CCDC9-203ENST00000596938 SUSD4Q5VX71 490 aa13.68□□□□□ -0.22
CCDC9-203ENST00000596938 DUSP27Q5VZP5 1158 aa13.68□□□□□ -0.22
CCDC9-203ENST00000596938 C7orf43Q8WVR3 580 aa13.68□□□□□ -0.22
CCDC9-203ENST00000596938 NECTIN2Q92692 538 aa13.68□□□□□ -0.22
CCDC9-203ENST00000596938 MRS2Q9HD23 443 aa13.68□□□□□ -0.22
CCDC9-203ENST00000596938 DBF4Q9UBU7 674 aaPredicted RBP13.68□□□□□ -0.22
CCDC9-203ENST00000596938 BRCA1P38398 1863 aaKnown RBP13.67□□□□□ -0.22
CCDC9-203ENST00000596938 NFKBIEO00221 500 aa13.67□□□□□ -0.22
CCDC9-203ENST00000596938 GPTP24298 496 aa13.67□□□□□ -0.22
CCDC9-203ENST00000596938 ALDH1B1P30837 517 aa13.67□□□□□ -0.22
CCDC9-203ENST00000596938 CRY2Q49AN0 593 aa13.67□□□□□ -0.22
CCDC9-203ENST00000596938 HSP90AB3PQ58FF7 597 aa13.67□□□□□ -0.22
CCDC9-203ENST00000596938 SOGA3Q5TF21 947 aa13.67□□□□□ -0.22
CCDC9-203ENST00000596938 HDGFL1Q5TGJ6 251 aa13.67□□□□□ -0.22
CCDC9-203ENST00000596938 PRPF40BQ6NWY9 871 aaKnown RBP13.67□□□□□ -0.22
CCDC9-203ENST00000596938 PPP1R42Q7Z4L9 355 aa13.67□□□□□ -0.22
CCDC9-203ENST00000596938 XAGE3Q8WTP9 111 aa13.67□□□□□ -0.22
CCDC9-203ENST00000596938 IBTKQ9P2D0 1353 aaPredicted RBP13.67□□□□□ -0.22
CCDC9-203ENST00000596938 UBN2Q6ZU65 1347 aa13.66□□□□□ -0.22
CCDC9-203ENST00000596938 ZC3H4Q9UPT8 1303 aaKnown RBP13.66□□□□□ -0.22
CCDC9-203ENST00000596938 BCORQ6W2J9 1755 aa13.66□□□□□ -0.22
CCDC9-203ENST00000596938 KIF3CO14782 793 aa13.66□□□□□ -0.22
CCDC9-203ENST00000596938 PRELPP51888 382 aa13.66□□□□□ -0.22
CCDC9-203ENST00000596938 RASSF7Q02833 373 aa13.66□□□□□ -0.22
CCDC9-203ENST00000596938 AIMP1Q12904 312 aaKnown RBP13.66□□□□□ -0.22
CCDC9-203ENST00000596938 ERFEQ4G0M1 354 aa13.66□□□□□ -0.22
CCDC9-203ENST00000596938 SLC10A5Q5PT55 438 aa13.66□□□□□ -0.22
CCDC9-203ENST00000596938 CHMP4AQ9BY43 222 aa13.66□□□□□ -0.22
CCDC9-203ENST00000596938 HYPKQ9NX55 129 aa13.66□□□□□ -0.22
CCDC9-203ENST00000596938 CHPF2Q9P2E5 772 aa13.66□□□□□ -0.22
CCDC9-203ENST00000596938 LAMB4A4D0S4 1761 aa13.66□□□□□ -0.22
CCDC9-203ENST00000596938 LTBP3Q9NS15 1303 aa13.65□□□□□ -0.22
CCDC9-203ENST00000596938 ARFGEF1Q9Y6D6 1849 aa13.65□□□□□ -0.22
CCDC9-203ENST00000596938 NTSR2O95665 410 aa13.65□□□□□ -0.22
CCDC9-203ENST00000596938 TCIRG1Q13488 830 aa13.65□□□□□ -0.22
CCDC9-203ENST00000596938 NUTM1Q86Y26 1132 aa13.65□□□□□ -0.22
CCDC9-203ENST00000596938 WWC1Q8IX03 1113 aa13.65□□□□□ -0.22
CCDC9-203ENST00000596938 ZNF219Q9P2Y4 722 aaPredicted RBP13.65□□□□□ -0.22
CCDC9-203ENST00000596938 KDM2BQ8NHM5 1336 aa13.64□□□□□ -0.23
CCDC9-203ENST00000596938 HOXA10P31260 410 aaPredicted RBP13.64□□□□□ -0.23
CCDC9-203ENST00000596938 ANKRD13DQ6ZTN6 518 aa13.64□□□□□ -0.23
CCDC9-203ENST00000596938 PLBD2Q8NHP8 589 aa13.64□□□□□ -0.23
CCDC9-203ENST00000596938 UTP14AQ9BVJ6 771 aaKnown RBP13.64□□□□□ -0.23
CCDC9-203ENST00000596938 RNF123Q5XPI4 1314 aa13.64□□□□□ -0.23
CCDC9-203ENST00000596938 NLRP10Q86W26 655 aa13.63□□□□□ -0.23
CCDC9-203ENST00000596938 C8orf58Q8NAV2 365 aa13.63□□□□□ -0.23
CCDC9-203ENST00000596938 TAOK3Q9H2K8 898 aa13.63□□□□□ -0.23
CCDC9-203ENST00000596938 RIC1Q4ADV7 1423 aa13.63□□□□□ -0.23
CCDC9-203ENST00000596938 IL16Q14005 1332 aa13.63□□□□□ -0.23
CCDC9-203ENST00000596938 ABCC12Q96J65 1359 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms