RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 COL3A1P02461 1466 aaPredicted RBP20.57■□□□□ 0.88
FOXA3-202ENST00000594297 PER1O15534 1290 aaPredicted RBP20.57■□□□□ 0.88
FOXA3-202ENST00000594297 CAMTA2O94983 1202 aa20.57■□□□□ 0.88
FOXA3-202ENST00000594297 IL6STP40189 918 aaPredicted RBP20.57■□□□□ 0.88
FOXA3-202ENST00000594297 L3MBTL3Q96JM7 780 aaPredicted RBP20.57■□□□□ 0.88
FOXA3-202ENST00000594297 TAF1DQ9H5J8 278 aaPredicted RBP20.57■□□□□ 0.88
FOXA3-202ENST00000594297 IQCA1LA6NCM1 817 aa20.56■□□□□ 0.88
FOXA3-202ENST00000594297 NPHP1O15259 732 aa20.56■□□□□ 0.88
FOXA3-202ENST00000594297 SRGNP10124 158 aa20.56■□□□□ 0.88
FOXA3-202ENST00000594297 VEGFBP49765 207 aa20.56■□□□□ 0.88
FOXA3-202ENST00000594297 ST5P78524 1137 aa20.56■□□□□ 0.88
FOXA3-202ENST00000594297 ZNF790Q6PG37 636 aa20.56■□□□□ 0.88
FOXA3-202ENST00000594297 ZNF541Q9H0D2 1346 aa20.55■□□□□ 0.88
FOXA3-202ENST00000594297 CTCFP49711 727 aaPredicted RBP20.55■□□□□ 0.88
FOXA3-202ENST00000594297 SOGA3Q5TF21 947 aa20.55■□□□□ 0.88
FOXA3-202ENST00000594297 AIDAQ96BJ3 306 aa20.55■□□□□ 0.88
FOXA3-202ENST00000594297 SETDB2Q96T68 719 aa20.55■□□□□ 0.88
FOXA3-202ENST00000594297 MASTLQ96GX5 879 aa20.54■□□□□ 0.88
FOXA3-202ENST00000594297 NPC1L1Q9UHC9 1359 aa20.54■□□□□ 0.88
FOXA3-202ENST00000594297 THSD7BQ9C0I4 1608 aa20.53■□□□□ 0.88
FOXA3-202ENST00000594297 TMEM88BA6NKF7 163 aa20.53■□□□□ 0.88
FOXA3-202ENST00000594297 DIAPH1O60610 1272 aaKnown RBP20.53■□□□□ 0.88
FOXA3-202ENST00000594297 A1BGP04217 495 aa20.53■□□□□ 0.88
FOXA3-202ENST00000594297 TEFQ10587 303 aa20.53■□□□□ 0.88
FOXA3-202ENST00000594297 EAPPQ56P03 285 aaPredicted RBP20.53■□□□□ 0.88
FOXA3-202ENST00000594297 TEX13AQ9BXU3 409 aaPredicted RBP20.53■□□□□ 0.88
FOXA3-202ENST00000594297 ITGBL1O95965 494 aaPredicted RBP20.52■□□□□ 0.88
FOXA3-202ENST00000594297 RALBP1Q15311 655 aa20.52■□□□□ 0.88
FOXA3-202ENST00000594297 CCDC93Q567U6 631 aa20.52■□□□□ 0.88
FOXA3-202ENST00000594297 IL17REQ8NFR9 667 aa20.52■□□□□ 0.88
FOXA3-202ENST00000594297 CNGB1Q14028 1251 aaPredicted RBP20.51■□□□□ 0.87
FOXA3-202ENST00000594297 CC2D1BQ5T0F9 858 aaKnown RBP20.51■□□□□ 0.87
FOXA3-202ENST00000594297 DZIP3Q86Y13 1208 aaKnown RBP20.51■□□□□ 0.87
FOXA3-202ENST00000594297 C7orf43Q8WVR3 580 aa20.51■□□□□ 0.87
FOXA3-202ENST00000594297 LBX1P52954 281 aa20.5■□□□□ 0.87
FOXA3-202ENST00000594297 FMNL2Q96PY5 1086 aa20.5■□□□□ 0.87
FOXA3-202ENST00000594297 WBP1LQ9NX94 342 aa20.5■□□□□ 0.87
FOXA3-202ENST00000594297 GNAT3A8MTJ3 354 aa20.49■□□□□ 0.87
FOXA3-202ENST00000594297 PIP4K2AP48426 406 aaPredicted RBP20.49■□□□□ 0.87
FOXA3-202ENST00000594297 FKBP4Q02790 459 aaKnown RBP eCLIP20.49■□□□□ 0.87
FOXA3-202ENST00000594297 OLFM4Q6UX06 510 aa20.49■□□□□ 0.87
FOXA3-202ENST00000594297 NPM2Q86SE8 214 aaKnown RBP20.49■□□□□ 0.87
FOXA3-202ENST00000594297 ZNF277Q9NRM2 450 aaPredicted RBP20.49■□□□□ 0.87
FOXA3-202ENST00000594297 HACL1Q9UJ83 578 aa20.49■□□□□ 0.87
FOXA3-202ENST00000594297 RNF123Q5XPI4 1314 aa20.49■□□□□ 0.87
FOXA3-202ENST00000594297 CEMIPQ8WUJ3 1361 aa20.48■□□□□ 0.87
FOXA3-202ENST00000594297 KCNQ3O43525 872 aa20.48■□□□□ 0.87
FOXA3-202ENST00000594297 HSPA8P11142 646 aaKnown RBP20.48■□□□□ 0.87
FOXA3-202ENST00000594297 EPHX2P34913 555 aa20.48■□□□□ 0.87
FOXA3-202ENST00000594297 NBPF5PQ86XG9 351 aaPredicted RBP20.48■□□□□ 0.87
FOXA3-202ENST00000594297 LTBP1Q14766 1721 aa20.47■□□□□ 0.87
FOXA3-202ENST00000594297 RASSF10A6NK89 507 aa20.47■□□□□ 0.87
FOXA3-202ENST00000594297 NPR1P16066 1061 aa20.47■□□□□ 0.87
FOXA3-202ENST00000594297 GAS2L2Q8NHY3 880 aa20.47■□□□□ 0.87
FOXA3-202ENST00000594297 PRKRIP1Q9H875 184 aaPredicted RBP20.47■□□□□ 0.87
FOXA3-202ENST00000594297 CLEC11AQ9Y240 323 aa20.47■□□□□ 0.87
FOXA3-202ENST00000594297 SNED1Q8TER0 1413 aa20.46■□□□□ 0.87
FOXA3-202ENST00000594297 COL4A5P29400 1685 aa20.46■□□□□ 0.87
FOXA3-202ENST00000594297 SLC34A2O95436 690 aa20.46■□□□□ 0.87
FOXA3-202ENST00000594297 U2SURPO15042 1029 aaKnown RBP20.45■□□□□ 0.86
FOXA3-202ENST00000594297 MAP1SQ66K74 1059 aaPredicted RBP20.45■□□□□ 0.86
FOXA3-202ENST00000594297 ABHD8Q96I13 439 aa20.45■□□□□ 0.86
FOXA3-202ENST00000594297 LAMB4A4D0S4 1761 aa20.44■□□□□ 0.86
FOXA3-202ENST00000594297 PRAMEF22A3QJZ6 481 aa20.44■□□□□ 0.86
FOXA3-202ENST00000594297 FAM161AQ3B820 660 aa20.44■□□□□ 0.86
FOXA3-202ENST00000594297 KLRG2A4D1S0 409 aaPredicted RBP20.43■□□□□ 0.86
FOXA3-202ENST00000594297 BTBD11A6QL63 1104 aa20.43■□□□□ 0.86
FOXA3-202ENST00000594297 IARSP41252 1262 aaKnown RBP20.43■□□□□ 0.86
FOXA3-202ENST00000594297 DEFB115Q30KQ5 88 aa20.43■□□□□ 0.86
FOXA3-202ENST00000594297 CNTROBQ8N137 903 aa20.43■□□□□ 0.86
FOXA3-202ENST00000594297 ZNF652Q9Y2D9 606 aa20.43■□□□□ 0.86
FOXA3-202ENST00000594297 USP16Q9Y5T5 823 aa20.43■□□□□ 0.86
FOXA3-202ENST00000594297 WDR33Q9C0J8 1336 aaKnown RBP20.43■□□□□ 0.86
FOXA3-202ENST00000594297 FZD9O00144 591 aa20.42■□□□□ 0.86
FOXA3-202ENST00000594297 CLEC4GQ6UXB4 293 aa20.42■□□□□ 0.86
FOXA3-202ENST00000594297 PNMA8AQ86V59 439 aaPredicted RBP20.42■□□□□ 0.86
FOXA3-202ENST00000594297 RTKN2Q8IZC4 609 aa20.41■□□□□ 0.86
FOXA3-202ENST00000594297 ABT1Q9ULW3 272 aaKnown RBP20.41■□□□□ 0.86
FOXA3-202ENST00000594297 FAM177BA6PVY3 158 aa20.4■□□□□ 0.86
FOXA3-202ENST00000594297 MIER1Q8N108 512 aa20.4■□□□□ 0.86
FOXA3-202ENST00000594297 GPC2Q8N158 579 aa20.4■□□□□ 0.86
FOXA3-202ENST00000594297 SYNE4Q8N205 404 aa20.4■□□□□ 0.86
FOXA3-202ENST00000594297 MYBBP1AQ9BQG0 1328 aaKnown RBP20.4■□□□□ 0.86
FOXA3-202ENST00000594297 NIP7Q9Y221 180 aaKnown RBP eCLIP20.4■□□□□ 0.86
FOXA3-202ENST00000594297 TRPM7Q96QT4 1865 aa20.39■□□□□ 0.86
FOXA3-202ENST00000594297 ABCC12Q96J65 1359 aa20.39■□□□□ 0.85
FOXA3-202ENST00000594297 MAP2K1Q02750 393 aaPredicted RBP20.39■□□□□ 0.85
FOXA3-202ENST00000594297 TPTE2Q6XPS3 522 aa20.38■□□□□ 0.85
FOXA3-202ENST00000594297 PHACTR3Q96KR7 559 aa20.38■□□□□ 0.85
FOXA3-202ENST00000594297 DDX21Q9NR30 783 aaKnown RBP eCLIP20.38■□□□□ 0.85
FOXA3-202ENST00000594297 NBPF26B4DH59 902 aa20.37■□□□□ 0.85
FOXA3-202ENST00000594297 CCER2I3L3R5 266 aa20.37■□□□□ 0.85
FOXA3-202ENST00000594297 FMR1Q06787 632 aaKnown RBP eCLIP20.37■□□□□ 0.85
FOXA3-202ENST00000594297 NBPF10Q6P3W6 841 aaKnown RBP20.37■□□□□ 0.85
FOXA3-202ENST00000594297 NBPF15Q8N660 670 aa20.37■□□□□ 0.85
FOXA3-202ENST00000594297 PRKAR2BP31323 418 aa20.36■□□□□ 0.85
FOXA3-202ENST00000594297 PSMD1Q99460 953 aa20.36■□□□□ 0.85
FOXA3-202ENST00000594297 GJA3Q9Y6H8 435 aa20.36■□□□□ 0.85
FOXA3-202ENST00000594297 SNRPA1P09661 255 aaKnown RBP20.35■□□□□ 0.85
FOXA3-202ENST00000594297 ALDH1B1P30837 517 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms