RNA–Protein interactions for RNA: ENST00000592266.1

RANBP3-227, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 589 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-227ENST00000592266 LAMB4A4D0S4 1761 aa22.72■■□□□ 1.23
RANBP3-227ENST00000592266 STYK1Q6J9G0 422 aa22.72■■□□□ 1.23
RANBP3-227ENST00000592266 RBM46Q8TBY0 533 aaKnown RBP22.72■■□□□ 1.23
RANBP3-227ENST00000592266 SBF1O95248 1867 aa22.72■■□□□ 1.23
RANBP3-227ENST00000592266 EIF4A1P60842 406 aaKnown RBP22.71■■□□□ 1.23
RANBP3-227ENST00000592266 TPTE2Q6XPS3 522 aa22.71■■□□□ 1.23
RANBP3-227ENST00000592266 MASTLQ96GX5 879 aa22.71■■□□□ 1.23
RANBP3-227ENST00000592266 NIP7Q9Y221 180 aaKnown RBP eCLIP22.71■■□□□ 1.23
RANBP3-227ENST00000592266 KDM3BQ7LBC6 1761 aa22.71■■□□□ 1.23
RANBP3-227ENST00000592266 NFKBIEO00221 500 aa22.7■■□□□ 1.22
RANBP3-227ENST00000592266 SRGNP10124 158 aa22.7■■□□□ 1.22
RANBP3-227ENST00000592266 LMOD3Q0VAK6 560 aa22.7■■□□□ 1.22
RANBP3-227ENST00000592266 DDX10Q13206 875 aaKnown RBP22.7■■□□□ 1.22
RANBP3-227ENST00000592266 SOGA3Q5TF21 947 aa22.7■■□□□ 1.22
RANBP3-227ENST00000592266 THUMPD2Q9BTF0 503 aaKnown RBP22.7■■□□□ 1.22
RANBP3-227ENST00000592266 MYBBP1AQ9BQG0 1328 aaKnown RBP22.7■■□□□ 1.22
RANBP3-227ENST00000592266 C21orf2O43822 256 aa22.69■■□□□ 1.22
RANBP3-227ENST00000592266 APLP1P51693 650 aa22.69■■□□□ 1.22
RANBP3-227ENST00000592266 COL11A2P13942 1736 aaPredicted RBP22.68■■□□□ 1.22
RANBP3-227ENST00000592266 ZNF219Q9P2Y4 722 aaPredicted RBP22.68■■□□□ 1.22
RANBP3-227ENST00000592266 TNRC6CQ9HCJ0 1690 aaKnown RBP22.68■■□□□ 1.22
RANBP3-227ENST00000592266 GLTPD2A6NH11 291 aa22.67■■□□□ 1.22
RANBP3-227ENST00000592266 ERVV-1B6SEH8 477 aa22.67■■□□□ 1.22
RANBP3-227ENST00000592266 RIPK4P57078 832 aa22.67■■□□□ 1.22
RANBP3-227ENST00000592266 PRPF40BQ6NWY9 871 aaKnown RBP22.67■■□□□ 1.22
RANBP3-227ENST00000592266 KIF6Q6ZMV9 814 aa22.67■■□□□ 1.22
RANBP3-227ENST00000592266 RRAGCQ9HB90 399 aa22.67■■□□□ 1.22
RANBP3-227ENST00000592266 TSPYL4Q9UJ04 414 aa22.67■■□□□ 1.22
RANBP3-227ENST00000592266 ERBB4Q15303 1308 aa22.66■■□□□ 1.22
RANBP3-227ENST00000592266 LTBP3Q9NS15 1303 aa22.66■■□□□ 1.22
RANBP3-227ENST00000592266 GTF2E1P29083 439 aaPredicted RBP22.66■■□□□ 1.22
RANBP3-227ENST00000592266 FSTL1Q12841 308 aa22.66■■□□□ 1.22
RANBP3-227ENST00000592266 TAOK3Q9H2K8 898 aa22.66■■□□□ 1.22
RANBP3-227ENST00000592266 BABAM1Q9NWV8 329 aa22.66■■□□□ 1.22
RANBP3-227ENST00000592266 RRP7AQ9Y3A4 280 aaKnown RBP22.66■■□□□ 1.22
RANBP3-227ENST00000592266 NPR1P16066 1061 aa22.65■■□□□ 1.22
RANBP3-227ENST00000592266 PRELPP51888 382 aa22.65■■□□□ 1.22
RANBP3-227ENST00000592266 HLFQ16534 295 aa22.65■■□□□ 1.22
RANBP3-227ENST00000592266 DPY19L2Q6NUT2 758 aa22.65■■□□□ 1.22
RANBP3-227ENST00000592266 NGEFQ8N5V2 710 aa22.65■■□□□ 1.22
RANBP3-227ENST00000592266 NYXQ9GZU5 481 aa22.65■■□□□ 1.22
RANBP3-227ENST00000592266 MAP3K15Q6ZN16 1313 aa22.64■■□□□ 1.22
RANBP3-227ENST00000592266 KLRG2A4D1S0 409 aaPredicted RBP22.64■■□□□ 1.21
RANBP3-227ENST00000592266 FAM177BA6PVY3 158 aa22.63■■□□□ 1.21
RANBP3-227ENST00000592266 MYL6BP14649 208 aa22.63■■□□□ 1.21
RANBP3-227ENST00000592266 VEGFAP15692 232 aaPredicted RBP22.63■■□□□ 1.21
RANBP3-227ENST00000592266 TMPOP42166 694 aaKnown RBP22.63■■□□□ 1.21
RANBP3-227ENST00000592266 ERFEQ4G0M1 354 aa22.63■■□□□ 1.21
RANBP3-227ENST00000592266 TIAM2Q8IVF5 1701 aa22.62■■□□□ 1.21
RANBP3-227ENST00000592266 WDR43Q15061 677 aaKnown RBP eCLIP22.62■■□□□ 1.21
RANBP3-227ENST00000592266 FER1L6Q2WGJ9 1857 aa22.61■■□□□ 1.21
RANBP3-227ENST00000592266 CCDC93Q567U6 631 aa22.61■■□□□ 1.21
RANBP3-227ENST00000592266 SMC1BQ8NDV3 1235 aa22.61■■□□□ 1.21
RANBP3-227ENST00000592266 ARFGEF2Q9Y6D5 1785 aa22.61■■□□□ 1.21
RANBP3-227ENST00000592266 SLX4Q8IY92 1834 aa22.6■■□□□ 1.21
RANBP3-227ENST00000592266 ALDH1B1P30837 517 aa22.6■■□□□ 1.21
RANBP3-227ENST00000592266 TTLL7Q6ZT98 887 aa22.6■■□□□ 1.21
RANBP3-227ENST00000592266 IBTKQ9P2D0 1353 aaPredicted RBP22.59■■□□□ 1.21
RANBP3-227ENST00000592266 C7orf43Q8WVR3 580 aa22.58■■□□□ 1.21
RANBP3-227ENST00000592266 RUNDC1Q96C34 613 aa22.58■■□□□ 1.21
RANBP3-227ENST00000592266 ZBTB3Q9H5J0 574 aa22.58■■□□□ 1.21
RANBP3-227ENST00000592266 CCDC88AQ3V6T2 1871 aa22.58■■□□□ 1.2
RANBP3-227ENST00000592266 CCDC146Q8IYE0 955 aa22.57■■□□□ 1.2
RANBP3-227ENST00000592266 EIF2S2P20042 333 aaKnown RBP22.56■■□□□ 1.2
RANBP3-227ENST00000592266 NEUROD2Q15784 382 aa22.56■■□□□ 1.2
RANBP3-227ENST00000592266 GIGYF2Q6Y7W6 1299 aaKnown RBP22.56■■□□□ 1.2
RANBP3-227ENST00000592266 RTKN2Q8IZC4 609 aa22.56■■□□□ 1.2
RANBP3-227ENST00000592266 RIC1Q4ADV7 1423 aa22.56■■□□□ 1.2
RANBP3-227ENST00000592266 CACNA1SQ13698 1873 aa22.56■■□□□ 1.2
RANBP3-227ENST00000592266 DICER1Q9UPY3 1922 aaKnown RBP22.55■■□□□ 1.2
RANBP3-227ENST00000592266 GPTP24298 496 aa22.55■■□□□ 1.2
RANBP3-227ENST00000592266 FKBP4Q02790 459 aaKnown RBP eCLIP22.55■■□□□ 1.27e-6■□□□□ 9.9
RANBP3-227ENST00000592266 CRY2Q49AN0 593 aa22.55■■□□□ 1.2
RANBP3-227ENST00000592266 PARP10Q53GL7 1025 aa22.55■■□□□ 1.2
RANBP3-227ENST00000592266 NUP98P52948 1817 aa22.54■■□□□ 1.2
RANBP3-227ENST00000592266 ABCC12Q96J65 1359 aa22.54■■□□□ 1.2
RANBP3-227ENST00000592266 PPP1R42Q7Z4L9 355 aa22.54■■□□□ 1.2
RANBP3-227ENST00000592266 NUTM1Q86Y26 1132 aa22.54■■□□□ 1.2
RANBP3-227ENST00000592266 ZNF34Q8IZ26 560 aa22.54■■□□□ 1.2
RANBP3-227ENST00000592266 UBN2Q6ZU65 1347 aa22.54■■□□□ 1.2
RANBP3-227ENST00000592266 RPGRQ92834 1020 aaKnown RBP22.53■■□□□ 1.2
RANBP3-227ENST00000592266 WDR90Q96KV7 1748 aa22.53■■□□□ 1.2
RANBP3-227ENST00000592266 PDIA6Q15084 440 aa22.52■■□□□ 1.2
RANBP3-227ENST00000592266 SUSD4Q5VX71 490 aa22.52■■□□□ 1.2
RANBP3-227ENST00000592266 PRKRIP1Q9H875 184 aaPredicted RBP22.52■■□□□ 1.2
RANBP3-227ENST00000592266 CHL1O00533 1208 aa22.51■■□□□ 1.19
RANBP3-227ENST00000592266 HSP90AB3PQ58FF7 597 aa22.51■■□□□ 1.19
RANBP3-227ENST00000592266 CC2D2BQ6DHV5 1058 aa22.51■■□□□ 1.19
RANBP3-227ENST00000592266 LRP10Q7Z4F1 713 aa22.51■■□□□ 1.19
RANBP3-227ENST00000592266 DNAJC5GQ8N7S2 189 aa22.51■■□□□ 1.19
RANBP3-227ENST00000592266 ADAMTS8Q9UP79 889 aa22.51■■□□□ 1.19
RANBP3-227ENST00000592266 NTSR2O95665 410 aa22.5■■□□□ 1.19
RANBP3-227ENST00000592266 LAS1LQ9Y4W2 734 aaKnown RBP22.5■■□□□ 1.19
RANBP3-227ENST00000592266 IQCA1LA6NCM1 817 aa22.49■■□□□ 1.19
RANBP3-227ENST00000592266 POTECB2RU33 542 aa22.49■■□□□ 1.19
RANBP3-227ENST00000592266 HOXA10P31260 410 aaPredicted RBP22.49■■□□□ 1.19
RANBP3-227ENST00000592266 GRIPAP1Q4V328 841 aa22.49■■□□□ 1.19
RANBP3-227ENST00000592266 RBM17Q96I25 401 aaKnown RBP22.49■■□□□ 1.19
RANBP3-227ENST00000592266 TRIM35Q9UPQ4 493 aa22.49■■□□□ 1.19
RANBP3-227ENST00000592266 RNF123Q5XPI4 1314 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms