RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 CNBD1Q8NA66 436 aa23.69■■□□□ 1.38
VAT1-208ENST00000590924 PLEKHF1Q96S99 279 aa23.69■■□□□ 1.38
VAT1-208ENST00000590924 LMNB1P20700 586 aa23.68■■□□□ 1.38
VAT1-208ENST00000590924 CLEC4GQ6UXB4 293 aa23.68■■□□□ 1.38
VAT1-208ENST00000590924 RGL2O15211 777 aa23.67■■□□□ 1.38
VAT1-208ENST00000590924 ZNF652Q9Y2D9 606 aa23.67■■□□□ 1.38
VAT1-208ENST00000590924 NFKBIEO00221 500 aa23.66■■□□□ 1.38
VAT1-208ENST00000590924 PRELPP51888 382 aa23.66■■□□□ 1.38
VAT1-208ENST00000590924 ST5P78524 1137 aa23.66■■□□□ 1.38
VAT1-208ENST00000590924 CCDC24Q8N4L8 307 aa23.66■■□□□ 1.38
VAT1-208ENST00000590924 RBM46Q8TBY0 533 aaKnown RBP23.66■■□□□ 1.38
VAT1-208ENST00000590924 ZNF622Q969S3 477 aaKnown RBP eCLIP23.66■■□□□ 1.38
VAT1-208ENST00000590924 NBPF26B4DH59 902 aa23.65■■□□□ 1.38
VAT1-208ENST00000590924 NPHP1O15259 732 aa23.65■■□□□ 1.38
VAT1-208ENST00000590924 NFE2L2Q16236 605 aa23.65■■□□□ 1.38
VAT1-208ENST00000590924 NBPF10Q6P3W6 841 aaKnown RBP23.65■■□□□ 1.38
VAT1-208ENST00000590924 NBPF15Q8N660 670 aa23.65■■□□□ 1.38
VAT1-208ENST00000590924 APLP1P51693 650 aa23.64■■□□□ 1.37
VAT1-208ENST00000590924 C16orf71Q8IYS4 520 aaPredicted RBP23.64■■□□□ 1.37
VAT1-208ENST00000590924 PNISRQ8TF01 805 aaKnown RBP23.64■■□□□ 1.37
VAT1-208ENST00000590924 PNNQ9H307 717 aaKnown RBP23.64■■□□□ 1.37
VAT1-208ENST00000590924 MIS18AQ9NYP9 233 aa23.63■■□□□ 1.37
VAT1-208ENST00000590924 STYK1Q6J9G0 422 aa23.62■■□□□ 1.37
VAT1-208ENST00000590924 MAPK8IP3Q9UPT6 1336 aa23.61■■□□□ 1.37
VAT1-208ENST00000590924 SRGNP10124 158 aa23.61■■□□□ 1.37
VAT1-208ENST00000590924 NBPF5PQ86XG9 351 aaPredicted RBP23.61■■□□□ 1.37
VAT1-208ENST00000590924 CNKSR1Q969H4 720 aa23.61■■□□□ 1.37
VAT1-208ENST00000590924 RRAGCQ9HB90 399 aa23.61■■□□□ 1.37
VAT1-208ENST00000590924 GLTPD2A6NH11 291 aa23.6■■□□□ 1.37
VAT1-208ENST00000590924 C21orf2O43822 256 aa23.6■■□□□ 1.37
VAT1-208ENST00000590924 FSTL1Q12841 308 aa23.6■■□□□ 1.37
VAT1-208ENST00000590924 MASTLQ96GX5 879 aa23.6■■□□□ 1.37
VAT1-208ENST00000590924 LTBP3Q9NS15 1303 aa23.59■■□□□ 1.37
VAT1-208ENST00000590924 WDR43Q15061 677 aaKnown RBP eCLIP23.59■■□□□ 1.37
VAT1-208ENST00000590924 MRS2Q9HD23 443 aa23.59■■□□□ 1.37
VAT1-208ENST00000590924 NIP7Q9Y221 180 aaKnown RBP eCLIP23.59■■□□□ 1.37
VAT1-208ENST00000590924 CCER2I3L3R5 266 aa23.58■■□□□ 1.37
VAT1-208ENST00000590924 EIF4A1P60842 406 aaKnown RBP23.58■■□□□ 1.37
VAT1-208ENST00000590924 CCDC184Q52MB2 194 aa23.58■■□□□ 1.37
VAT1-208ENST00000590924 PRPF40BQ6NWY9 871 aaKnown RBP23.58■■□□□ 1.37
VAT1-208ENST00000590924 THUMPD2Q9BTF0 503 aaKnown RBP23.58■■□□□ 1.37
VAT1-208ENST00000590924 TPTE2Q6XPS3 522 aa23.57■■□□□ 1.36
VAT1-208ENST00000590924 ZNF219Q9P2Y4 722 aaPredicted RBP23.57■■□□□ 1.36
VAT1-208ENST00000590924 SOGA3Q5TF21 947 aa23.56■■□□□ 1.36
VAT1-208ENST00000590924 KLRG2A4D1S0 409 aaPredicted RBP23.55■■□□□ 1.36
VAT1-208ENST00000590924 HLFQ16534 295 aa23.55■■□□□ 1.36
VAT1-208ENST00000590924 TAOK3Q9H2K8 898 aa23.55■■□□□ 1.36
VAT1-208ENST00000590924 ERVV-1B6SEH8 477 aa23.54■■□□□ 1.36
VAT1-208ENST00000590924 VEGFAP15692 232 aaPredicted RBP23.54■■□□□ 1.36
VAT1-208ENST00000590924 NPR1P16066 1061 aa23.54■■□□□ 1.36
VAT1-208ENST00000590924 ADAMTS8Q9UP79 889 aa23.54■■□□□ 1.36
VAT1-208ENST00000590924 ANKRD36CQ5JPF3 1778 aa23.54■■□□□ 1.36
VAT1-208ENST00000590924 ERFEQ4G0M1 354 aa23.53■■□□□ 1.36
VAT1-208ENST00000590924 DNAJC5GQ8N7S2 189 aa23.53■■□□□ 1.36
VAT1-208ENST00000590924 SMC1BQ8NDV3 1235 aa23.53■■□□□ 1.36
VAT1-208ENST00000590924 MAP3K15Q6ZN16 1313 aa23.53■■□□□ 1.36
VAT1-208ENST00000590924 DPY19L2Q6NUT2 758 aa23.52■■□□□ 1.36
VAT1-208ENST00000590924 ERBB4Q15303 1308 aa23.52■■□□□ 1.36
VAT1-208ENST00000590924 SCN4AP35499 1836 aa23.52■■□□□ 1.36
VAT1-208ENST00000590924 C7orf43Q8WVR3 580 aa23.51■■□□□ 1.35
VAT1-208ENST00000590924 RRP7AQ9Y3A4 280 aaKnown RBP23.51■■□□□ 1.35
VAT1-208ENST00000590924 IBTKQ9P2D0 1353 aaPredicted RBP23.51■■□□□ 1.35
VAT1-208ENST00000590924 KIF6Q6ZMV9 814 aa23.5■■□□□ 1.35
VAT1-208ENST00000590924 MIER1Q8N108 512 aa23.5■■□□□ 1.35
VAT1-208ENST00000590924 NGEFQ8N5V2 710 aa23.5■■□□□ 1.35
VAT1-208ENST00000590924 TSPYL4Q9UJ04 414 aa23.5■■□□□ 1.35
VAT1-208ENST00000590924 RIC1Q4ADV7 1423 aa23.5■■□□□ 1.35
VAT1-208ENST00000590924 FAM177BA6PVY3 158 aa23.49■■□□□ 1.35
VAT1-208ENST00000590924 RIPK4P57078 832 aa23.49■■□□□ 1.35
VAT1-208ENST00000590924 CCDC93Q567U6 631 aa23.49■■□□□ 1.35
VAT1-208ENST00000590924 TTLL7Q6ZT98 887 aa23.49■■□□□ 1.35
VAT1-208ENST00000590924 NYXQ9GZU5 481 aa23.49■■□□□ 1.35
VAT1-208ENST00000590924 MYL6BP14649 208 aa23.48■■□□□ 1.35
VAT1-208ENST00000590924 GTF2E1P29083 439 aaPredicted RBP23.48■■□□□ 1.35
VAT1-208ENST00000590924 TMPOP42166 694 aaKnown RBP23.48■■□□□ 1.35
VAT1-208ENST00000590924 LMOD3Q0VAK6 560 aa23.48■■□□□ 1.35
VAT1-208ENST00000590924 BABAM1Q9NWV8 329 aa23.48■■□□□ 1.35
VAT1-208ENST00000590924 ABCC12Q96J65 1359 aa23.48■■□□□ 1.35
VAT1-208ENST00000590924 POTECB2RU33 542 aa23.47■■□□□ 1.35
VAT1-208ENST00000590924 RUNDC1Q96C34 613 aa23.47■■□□□ 1.35
VAT1-208ENST00000590924 LAMB2P55268 1798 aa23.46■■□□□ 1.35
VAT1-208ENST00000590924 CRY2Q49AN0 593 aa23.46■■□□□ 1.35
VAT1-208ENST00000590924 UBN2Q6ZU65 1347 aa23.45■■□□□ 1.34
VAT1-208ENST00000590924 ALDH1B1P30837 517 aa23.45■■□□□ 1.34
VAT1-208ENST00000590924 ZBTB3Q9H5J0 574 aa23.45■■□□□ 1.34
VAT1-208ENST00000590924 FKBP4Q02790 459 aaKnown RBP eCLIP23.44■■□□□ 1.34
VAT1-208ENST00000590924 LRP10Q7Z4F1 713 aa23.44■■□□□ 1.34
VAT1-208ENST00000590924 NUTM1Q86Y26 1132 aa23.44■■□□□ 1.34
VAT1-208ENST00000590924 SNED1Q8TER0 1413 aa23.43■■□□□ 1.34
VAT1-208ENST00000590924 HTRA3P83110 453 aa23.43■■□□□ 1.34
VAT1-208ENST00000590924 GIGYF2Q6Y7W6 1299 aaKnown RBP23.43■■□□□ 1.34
VAT1-208ENST00000590924 ZNF34Q8IZ26 560 aa23.43■■□□□ 1.34
VAT1-208ENST00000590924 KLRG1Q96E93 195 aa23.43■■□□□ 1.34
VAT1-208ENST00000590924 GPTP24298 496 aa23.42■■□□□ 1.34
VAT1-208ENST00000590924 PDIA6Q15084 440 aa23.42■■□□□ 1.34
VAT1-208ENST00000590924 RTKN2Q8IZC4 609 aa23.42■■□□□ 1.34
VAT1-208ENST00000590924 DDNO94850 711 aaPredicted RBP23.41■■□□□ 1.34
VAT1-208ENST00000590924 EIF2S2P20042 333 aaKnown RBP23.4■■□□□ 1.34
VAT1-208ENST00000590924 SUSD4Q5VX71 490 aa23.4■■□□□ 1.34
VAT1-208ENST00000590924 OLFM4Q6UX06 510 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms