RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 ZNF428Q96B54 188 aa24.55■■□□□ 1.52
DDX39A-214ENST00000590556 PHAXQ9H814 394 aaKnown RBP24.55■■□□□ 1.52
DDX39A-214ENST00000590556 BCL2L12Q9HB09 334 aa24.55■■□□□ 1.52
DDX39A-214ENST00000590556 MAP3K15Q6ZN16 1313 aa24.55■■□□□ 1.52
DDX39A-214ENST00000590556 SCN7AQ01118 1682 aa24.54■■□□□ 1.52
DDX39A-214ENST00000590556 ERVV-1B6SEH8 477 aa24.54■■□□□ 1.52
DDX39A-214ENST00000590556 ZBTB3Q9H5J0 574 aa24.54■■□□□ 1.52
DDX39A-214ENST00000590556 ZNF652Q9Y2D9 606 aa24.54■■□□□ 1.52
DDX39A-214ENST00000590556 BCORQ6W2J9 1755 aa24.53■■□□□ 1.52
DDX39A-214ENST00000590556 RGL2O15211 777 aa24.52■■□□□ 1.52
DDX39A-214ENST00000590556 POLD1P28340 1107 aa24.52■■□□□ 1.52
DDX39A-214ENST00000590556 HLFQ16534 295 aa24.52■■□□□ 1.52
DDX39A-214ENST00000590556 CLEC4GQ6UXB4 293 aa24.52■■□□□ 1.52
DDX39A-214ENST00000590556 ANKRD13DQ6ZTN6 518 aa24.51■■□□□ 1.51
DDX39A-214ENST00000590556 G2E3Q7L622 706 aa24.51■■□□□ 1.51
DDX39A-214ENST00000590556 SSH1Q8WYL5 1049 aa24.51■■□□□ 1.51
DDX39A-214ENST00000590556 COL24A1Q17RW2 1714 aa24.51■■□□□ 1.51
DDX39A-214ENST00000590556 DDX58O95786 925 aaKnown RBP24.5■■□□□ 1.51
DDX39A-214ENST00000590556 MMP10P09238 476 aa24.5■■□□□ 1.51
DDX39A-214ENST00000590556 PTGER2P43116 358 aa24.5■■□□□ 1.51
DDX39A-214ENST00000590556 ALDH1L2Q3SY69 923 aa24.5■■□□□ 1.51
DDX39A-214ENST00000590556 PLBD2Q8NHP8 589 aa24.5■■□□□ 1.51
DDX39A-214ENST00000590556 TBC1D9BQ66K14 1250 aa24.49■■□□□ 1.51
DDX39A-214ENST00000590556 BICDL1Q6ZP65 573 aa24.49■■□□□ 1.51
DDX39A-214ENST00000590556 NUP98P52948 1817 aa24.49■■□□□ 1.51
DDX39A-214ENST00000590556 TM4SF1P30408 202 aa24.48■■□□□ 1.51
DDX39A-214ENST00000590556 FLIIQ13045 1269 aa24.48■■□□□ 1.51
DDX39A-214ENST00000590556 NFIXQ14938 502 aa24.48■■□□□ 1.51
DDX39A-214ENST00000590556 GIGYF2Q6Y7W6 1299 aaKnown RBP24.48■■□□□ 1.51
DDX39A-214ENST00000590556 RIC3Q7Z5B4 369 aa24.48■■□□□ 1.51
DDX39A-214ENST00000590556 MRPL50Q8N5N7 158 aaKnown RBP24.48■■□□□ 1.51
DDX39A-214ENST00000590556 SGIP1Q9BQI5 828 aa24.48■■□□□ 1.51
DDX39A-214ENST00000590556 BCL2L13Q9BXK5 485 aa24.48■■□□□ 1.51
DDX39A-214ENST00000590556 SMC4Q9NTJ3 1288 aa24.48■■□□□ 1.51
DDX39A-214ENST00000590556 PARP3Q9Y6F1 533 aa24.47■■□□□ 1.51
DDX39A-214ENST00000590556 RARSP54136 660 aaKnown RBP24.46■■□□□ 1.51
DDX39A-214ENST00000590556 SETDB2Q96T68 719 aa24.46■■□□□ 1.51
DDX39A-214ENST00000590556 DDR1Q08345 913 aa24.45■■□□□ 1.5
DDX39A-214ENST00000590556 FKBP5Q13451 457 aaPredicted RBP24.45■■□□□ 1.5
DDX39A-214ENST00000590556 HSP90AB3PQ58FF7 597 aa24.45■■□□□ 1.5
DDX39A-214ENST00000590556 KSR2Q6VAB6 950 aa24.45■■□□□ 1.5
DDX39A-214ENST00000590556 NIP7Q9Y221 180 aaKnown RBP eCLIP24.45■■□□□ 1.5
DDX39A-214ENST00000590556 PI4KAP2A4QPH2 592 aa24.43■■□□□ 1.5
DDX39A-214ENST00000590556 POLRMTO00411 1230 aaKnown RBP24.43■■□□□ 1.5
DDX39A-214ENST00000590556 GPTP24298 496 aa24.43■■□□□ 1.5
DDX39A-214ENST00000590556 TCIRG1Q13488 830 aa24.43■■□□□ 1.5
DDX39A-214ENST00000590556 PI4KAP1Q8N8J0 262 aa24.43■■□□□ 1.5
DDX39A-214ENST00000590556 MAP3K2Q9Y2U5 619 aa24.43■■□□□ 1.5
DDX39A-214ENST00000590556 ATP10DQ9P241 1426 aa24.43■■□□□ 1.5
DDX39A-214ENST00000590556 LRP5O75197 1615 aa24.43■■□□□ 1.5
DDX39A-214ENST00000590556 ARFGEF2Q9Y6D5 1785 aa24.42■■□□□ 1.5
DDX39A-214ENST00000590556 ZNF34Q8IZ26 560 aa24.42■■□□□ 1.5
DDX39A-214ENST00000590556 PPP1R1BQ9UD71 204 aaPredicted RBP24.42■■□□□ 1.5
DDX39A-214ENST00000590556 ADCY9O60503 1353 aa24.42■■□□□ 1.5
DDX39A-214ENST00000590556 CARMIL3Q8ND23 1372 aa24.42■■□□□ 1.5
DDX39A-214ENST00000590556 SERPINB2P05120 415 aa24.41■■□□□ 1.5
DDX39A-214ENST00000590556 METTL22Q9BUU2 404 aaPredicted RBP24.4■■□□□ 1.5
DDX39A-214ENST00000590556 ANKRD36CQ5JPF3 1778 aa24.39■■□□□ 1.5
DDX39A-214ENST00000590556 BRPF1P55201 1214 aaPredicted RBP24.39■■□□□ 1.49
DDX39A-214ENST00000590556 MYD88Q99836 296 aa24.39■■□□□ 1.49
DDX39A-214ENST00000590556 PTPRCP08575 1304 aa24.38■■□□□ 1.49
DDX39A-214ENST00000590556 UBN2Q6ZU65 1347 aa24.38■■□□□ 1.49
DDX39A-214ENST00000590556 BCAR3O75815 825 aa24.38■■□□□ 1.49
DDX39A-214ENST00000590556 PARP10Q53GL7 1025 aa24.38■■□□□ 1.49
DDX39A-214ENST00000590556 NBPF5PQ86XG9 351 aaPredicted RBP24.38■■□□□ 1.49
DDX39A-214ENST00000590556 DNAAF4Q8WXU2 420 aa24.38■■□□□ 1.49
DDX39A-214ENST00000590556 FAM177BA6PVY3 158 aa24.37■■□□□ 1.49
DDX39A-214ENST00000590556 ATP5J2-PTCD1G3V325 749 aa24.37■■□□□ 1.49
DDX39A-214ENST00000590556 NEXNQ0ZGT2 675 aa24.37■■□□□ 1.49
DDX39A-214ENST00000590556 ISCA1Q9BUE6 129 aa24.37■■□□□ 1.49
DDX39A-214ENST00000590556 NOB1Q9ULX3 412 aaKnown RBP24.37■■□□□ 1.49
DDX39A-214ENST00000590556 AFDNP55196 1824 aaKnown RBP24.37■■□□□ 1.49
DDX39A-214ENST00000590556 KIF16BQ96L93 1317 aa24.36■■□□□ 1.49
DDX39A-214ENST00000590556 F6X3S4 739 aa24.36■■□□□ 1.49
DDX39A-214ENST00000590556 NPHP1O15259 732 aa24.36■■□□□ 1.49
DDX39A-214ENST00000590556 TPTE2Q6XPS3 522 aa24.36■■□□□ 1.49
DDX39A-214ENST00000590556 NLRP10Q86W26 655 aa24.36■■□□□ 1.49
DDX39A-214ENST00000590556 TRIM28Q13263 835 aaKnown RBP24.35■■□□□ 1.49
DDX39A-214ENST00000590556 SUSD4Q5VX71 490 aa24.35■■□□□ 1.49
DDX39A-214ENST00000590556 PPP1R42Q7Z4L9 355 aa24.35■■□□□ 1.49
DDX39A-214ENST00000590556 KLHL34Q8N239 644 aa24.35■■□□□ 1.49
DDX39A-214ENST00000590556 CNBD1Q8NA66 436 aa24.35■■□□□ 1.49
DDX39A-214ENST00000590556 NYXQ9GZU5 481 aa24.35■■□□□ 1.49
DDX39A-214ENST00000590556 RCAN3Q9UKA8 241 aa24.34■■□□□ 1.49
DDX39A-214ENST00000590556 NRXN2Q9P2S2 1712 aa24.34■■□□□ 1.49
DDX39A-214ENST00000590556 IPO8O15397 1037 aaKnown RBP24.33■■□□□ 1.49
DDX39A-214ENST00000590556 GTF2E1P29083 439 aaPredicted RBP24.33■■□□□ 1.49
DDX39A-214ENST00000590556 PRR5LQ6MZQ0 368 aa24.33■■□□□ 1.49
DDX39A-214ENST00000590556 UTP14AQ9BVJ6 771 aaKnown RBP24.33■■□□□ 1.49
DDX39A-214ENST00000590556 SLC4A10Q6U841 1118 aa24.32■■□□□ 1.48
DDX39A-214ENST00000590556 CCDC191Q8NCU4 936 aa24.32■■□□□ 1.48
DDX39A-214ENST00000590556 FRAT1Q92837 279 aaPredicted RBP24.32■■□□□ 1.48
DDX39A-214ENST00000590556 API5Q9BZZ5 524 aaKnown RBP24.32■■□□□ 1.48
DDX39A-214ENST00000590556 CD2APQ9Y5K6 639 aa24.32■■□□□ 1.48
DDX39A-214ENST00000590556 IBTKQ9P2D0 1353 aaPredicted RBP24.31■■□□□ 1.48
DDX39A-214ENST00000590556 NTSR2O95665 410 aa24.31■■□□□ 1.48
DDX39A-214ENST00000590556 IGKV5-2P06315 115 aa24.31■■□□□ 1.48
DDX39A-214ENST00000590556 ST5P78524 1137 aa24.31■■□□□ 1.48
DDX39A-214ENST00000590556 CCDC24Q8N4L8 307 aa24.31■■□□□ 1.48
DDX39A-214ENST00000590556 LINS1Q8NG48 757 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms