RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 RTF1Q92541 710 aaKnown RBP9.55□□□□□ -0.88
SMAD4-210ENST00000590061 CARD10Q9BWT7 1032 aa9.55□□□□□ -0.88
SMAD4-210ENST00000590061 RSPH6AQ9H0K4 717 aa9.55□□□□□ -0.88
SMAD4-210ENST00000590061 THRAP3Q9Y2W1 955 aaKnown RBP9.55□□□□□ -0.88
SMAD4-210ENST00000590061 COL16A1Q07092 1604 aaPredicted RBP9.55□□□□□ -0.88
SMAD4-210ENST00000590061 WDR17Q8IZU2 1322 aa9.55□□□□□ -0.88
SMAD4-210ENST00000590061 MARF1Q9Y4F3 1742 aaKnown RBP9.54□□□□□ -0.88
SMAD4-210ENST00000590061 HSP90AB1P08238 724 aaKnown RBP9.54□□□□□ -0.88
SMAD4-210ENST00000590061 PRKAR2BP31323 418 aa9.54□□□□□ -0.88
SMAD4-210ENST00000590061 SLC4A3P48751 1232 aa9.54□□□□□ -0.88
SMAD4-210ENST00000590061 NFE2L2Q16236 605 aa9.54□□□□□ -0.88
SMAD4-210ENST00000590061 CABLES1Q8TDN4 633 aa9.54□□□□□ -0.88
SMAD4-210ENST00000590061 YTHDC1Q96MU7 727 aaKnown RBP9.54□□□□□ -0.88
SMAD4-210ENST00000590061 NLRP2Q9NX02 1062 aa9.54□□□□□ -0.88
SMAD4-210ENST00000590061 SPG7Q9UQ90 795 aa9.54□□□□□ -0.88
SMAD4-210ENST00000590061 SHPRHQ149N8 1683 aa9.54□□□□□ -0.88
SMAD4-210ENST00000590061 IL16Q14005 1332 aa9.54□□□□□ -0.88
SMAD4-210ENST00000590061 COL14A1Q05707 1796 aaKnown RBP9.53□□□□□ -0.88
SMAD4-210ENST00000590061 E9PSI1 815 aa9.53□□□□□ -0.88
SMAD4-210ENST00000590061 APAF1O14727 1248 aa9.53□□□□□ -0.88
SMAD4-210ENST00000590061 CFHP08603 1231 aa9.53□□□□□ -0.88
SMAD4-210ENST00000590061 TATP17735 454 aaPredicted RBP9.53□□□□□ -0.88
SMAD4-210ENST00000590061 POTEAQ6S8J7 498 aa9.53□□□□□ -0.88
SMAD4-210ENST00000590061 TOM1L2Q6ZVM7 507 aa9.53□□□□□ -0.88
SMAD4-210ENST00000590061 LTV1Q96GA3 475 aaPredicted RBP9.53□□□□□ -0.88
SMAD4-210ENST00000590061 PLEKHF1Q96S99 279 aa9.53□□□□□ -0.88
SMAD4-210ENST00000590061 PRR14Q9BWN1 585 aa9.53□□□□□ -0.88
SMAD4-210ENST00000590061 MYH16Q9H6N6 1097 aa9.53□□□□□ -0.88
SMAD4-210ENST00000590061 BABAM1Q9NWV8 329 aa9.53□□□□□ -0.88
SMAD4-210ENST00000590061 FAM83GA6ND36 823 aa9.52□□□□□ -0.89
SMAD4-210ENST00000590061 ACTN4O43707 911 aaKnown RBP9.52□□□□□ -0.89
SMAD4-210ENST00000590061 FBLN1P23142 703 aa9.52□□□□□ -0.89
SMAD4-210ENST00000590061 TMPOP42166 694 aaKnown RBP9.52□□□□□ -0.89
SMAD4-210ENST00000590061 C1orf141Q5JVX7 400 aa9.52□□□□□ -0.89
SMAD4-210ENST00000590061 MEX3CQ5U5Q3 659 aaKnown RBP9.52□□□□□ -0.89
SMAD4-210ENST00000590061 NLRP7Q8WX94 980 aa9.52□□□□□ -0.89
SMAD4-210ENST00000590061 NCAPD2Q15021 1401 aa9.51□□□□□ -0.89
SMAD4-210ENST00000590061 HMOX1P09601 288 aa9.51□□□□□ -0.89
SMAD4-210ENST00000590061 CT47B1P0C2W7 299 aaPredicted RBP9.51□□□□□ -0.89
SMAD4-210ENST00000590061 RIPK4P57078 832 aa9.51□□□□□ -0.89
SMAD4-210ENST00000590061 COPS2P61201 443 aa9.51□□□□□ -0.89
SMAD4-210ENST00000590061 MAP2K5Q13163 448 aa9.51□□□□□ -0.89
SMAD4-210ENST00000590061 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.51□□□□□ -0.89
SMAD4-210ENST00000590061 NGLY1Q96IV0 654 aa9.51□□□□□ -0.89
SMAD4-210ENST00000590061 BTG4Q9NY30 223 aa9.51□□□□□ -0.89
SMAD4-210ENST00000590061 PCDHB3Q9Y5E6 796 aa9.51□□□□□ -0.89
SMAD4-210ENST00000590061 CRYBG1Q9Y4K1 1723 aa9.51□□□□□ -0.89
SMAD4-210ENST00000590061 CRB1P82279 1406 aa9.5□□□□□ -0.89
SMAD4-210ENST00000590061 GNAT3A8MTJ3 354 aa9.5□□□□□ -0.89
SMAD4-210ENST00000590061 HMGB2P26583 209 aaKnown RBP9.5□□□□□ -0.89
SMAD4-210ENST00000590061 CHRNA2Q15822 529 aa9.5□□□□□ -0.89
SMAD4-210ENST00000590061 NBPF6Q5VWK0 638 aa9.5□□□□□ -0.89
SMAD4-210ENST00000590061 BLOC1S3Q6QNY0 202 aa9.5□□□□□ -0.89
SMAD4-210ENST00000590061 CCDC146Q8IYE0 955 aa9.5□□□□□ -0.89
SMAD4-210ENST00000590061 NKX2-3Q8TAU0 364 aa9.5□□□□□ -0.89
SMAD4-210ENST00000590061 ZNF428Q96B54 188 aa9.5□□□□□ -0.89
SMAD4-210ENST00000590061 NBPF4Q96M43 638 aa9.5□□□□□ -0.89
SMAD4-210ENST00000590061 PEAK1Q9H792 1746 aa9.5□□□□□ -0.89
SMAD4-210ENST00000590061 COL5A2P05997 1499 aaPredicted RBP9.49□□□□□ -0.89
SMAD4-210ENST00000590061 RGPD1P0DJD0 1748 aa9.49□□□□□ -0.89
SMAD4-210ENST00000590061 NWD2Q9ULI1 1742 aa9.49□□□□□ -0.89
SMAD4-210ENST00000590061 NUTM2BA6NNL0 878 aaPredicted RBP9.49□□□□□ -0.89
SMAD4-210ENST00000590061 NUTM2EB1AL46 878 aaPredicted RBP9.49□□□□□ -0.89
SMAD4-210ENST00000590061 ZPR1O75312 459 aa9.49□□□□□ -0.89
SMAD4-210ENST00000590061 ADAMTS2O95450 1211 aa9.49□□□□□ -0.89
SMAD4-210ENST00000590061 IL2RBP14784 551 aa9.49□□□□□ -0.89
SMAD4-210ENST00000590061 GNAI1P63096 354 aa9.49□□□□□ -0.89
SMAD4-210ENST00000590061 AKAP4Q5JQC9 854 aa9.49□□□□□ -0.89
SMAD4-210ENST00000590061 UNC5CLQ8IV45 518 aa9.49□□□□□ -0.89
SMAD4-210ENST00000590061 NUTM2AQ8IVF1 878 aaPredicted RBP9.49□□□□□ -0.89
SMAD4-210ENST00000590061 WWC1Q8IX03 1113 aa9.49□□□□□ -0.89
SMAD4-210ENST00000590061 FNBP4Q8N3X1 1017 aaPredicted RBP9.49□□□□□ -0.89
SMAD4-210ENST00000590061 COL18A1P39060 1754 aa9.49□□□□□ -0.89
SMAD4-210ENST00000590061 SOS1Q07889 1333 aaPredicted RBP9.49□□□□□ -0.89
SMAD4-210ENST00000590061 ABCA3Q99758 1704 aa9.48□□□□□ -0.89
SMAD4-210ENST00000590061 KMT5BQ4FZB7 885 aa9.48□□□□□ -0.89
SMAD4-210ENST00000590061 IFNL2Q8IZJ0 200 aa9.48□□□□□ -0.89
SMAD4-210ENST00000590061 STRN4Q9NRL3 753 aa9.48□□□□□ -0.89
SMAD4-210ENST00000590061 OVOS2A0A0G2JMS6 1433 aa9.48□□□□□ -0.89
SMAD4-210ENST00000590061 VPS72Q15906 364 aa9.47□□□□□ -0.89
SMAD4-210ENST00000590061 PPP1R18Q6NYC8 613 aa9.47□□□□□ -0.89
SMAD4-210ENST00000590061 BARGINQ6ZT62 677 aa9.47□□□□□ -0.89
SMAD4-210ENST00000590061 IFT57Q9NWB7 429 aa9.47□□□□□ -0.89
SMAD4-210ENST00000590061 GTF3C3Q9Y5Q9 886 aa9.47□□□□□ -0.89
SMAD4-210ENST00000590061 LMO7Q8WWI1 1683 aa9.47□□□□□ -0.89
SMAD4-210ENST00000590061 CAMTA1Q9Y6Y1 1673 aa9.47□□□□□ -0.89
SMAD4-210ENST00000590061 PCDH11XQ9BZA7 1347 aa9.47□□□□□ -0.89
SMAD4-210ENST00000590061 PCDH11YQ9BZA8 1340 aa9.47□□□□□ -0.89
SMAD4-210ENST00000590061 MAP3K5Q99683 1374 aa9.47□□□□□ -0.89
SMAD4-210ENST00000590061 TLL1O43897 1013 aa9.46□□□□□ -0.9
SMAD4-210ENST00000590061 NEUROD2Q15784 382 aa9.46□□□□□ -0.9
SMAD4-210ENST00000590061 ZNF772Q68DY9 489 aaPredicted RBP9.46□□□□□ -0.9
SMAD4-210ENST00000590061 ZNF530Q6P9A1 599 aaPredicted RBP9.46□□□□□ -0.9
SMAD4-210ENST00000590061 AEBP1Q8IUX7 1158 aa9.46□□□□□ -0.9
SMAD4-210ENST00000590061 ZCRB1Q8TBF4 217 aaKnown RBP9.46□□□□□ -0.9
SMAD4-210ENST00000590061 TRPC5Q9UL62 973 aaPredicted RBP9.46□□□□□ -0.9
SMAD4-210ENST00000590061 ZNF521Q96K83 1311 aa9.46□□□□□ -0.9
SMAD4-210ENST00000590061 EXOC5O00471 708 aa9.45□□□□□ -0.9
SMAD4-210ENST00000590061 IRF6O14896 467 aa9.45□□□□□ -0.9
SMAD4-210ENST00000590061 SLFN5Q08AF3 891 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms