RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 HACL1Q9UJ83 578 aa17.45■□□□□ 0.38
NEDD4L-227ENST00000590020 PDZRN3Q9UPQ7 1066 aa17.45■□□□□ 0.38
NEDD4L-227ENST00000590020 UBR2Q8IWV8 1755 aa17.45■□□□□ 0.38
NEDD4L-227ENST00000590020 RNF123Q5XPI4 1314 aa17.45■□□□□ 0.38
NEDD4L-227ENST00000590020 HMOX1P09601 288 aa17.44■□□□□ 0.38
NEDD4L-227ENST00000590020 SRGNP10124 158 aa17.44■□□□□ 0.38
NEDD4L-227ENST00000590020 EPHX2P34913 555 aa17.44■□□□□ 0.38
NEDD4L-227ENST00000590020 FMR1Q06787 632 aaKnown RBP eCLIP17.44■□□□□ 0.38
NEDD4L-227ENST00000590020 STYK1Q6J9G0 422 aa17.44■□□□□ 0.38
NEDD4L-227ENST00000590020 MORC1Q86VD1 984 aa17.44■□□□□ 0.38
NEDD4L-227ENST00000590020 VSIG10Q8N0Z9 540 aa17.44■□□□□ 0.38
NEDD4L-227ENST00000590020 CNTROBQ8N137 903 aa17.44■□□□□ 0.38
NEDD4L-227ENST00000590020 PANK3Q9H999 370 aa17.44■□□□□ 0.38
NEDD4L-227ENST00000590020 ARFGEF2Q9Y6D5 1785 aa17.43■□□□□ 0.38
NEDD4L-227ENST00000590020 STARD3NLO95772 234 aa17.43■□□□□ 0.38
NEDD4L-227ENST00000590020 MAP2K1Q02750 393 aaPredicted RBP17.43■□□□□ 0.38
NEDD4L-227ENST00000590020 PAXIP1Q6ZW49 1069 aaPredicted RBP17.43■□□□□ 0.38
NEDD4L-227ENST00000590020 MASTLQ96GX5 879 aa17.43■□□□□ 0.38
NEDD4L-227ENST00000590020 CFAP44Q96MT7 982 aa17.43■□□□□ 0.38
NEDD4L-227ENST00000590020 TSKSQ9UJT2 592 aa17.43■□□□□ 0.38
NEDD4L-227ENST00000590020 ST5P78524 1137 aa17.42■□□□□ 0.38
NEDD4L-227ENST00000590020 MTHFSDQ2M296 383 aaKnown RBP17.42■□□□□ 0.38
NEDD4L-227ENST00000590020 SOGA3Q5TF21 947 aa17.42■□□□□ 0.38
NEDD4L-227ENST00000590020 SETDB2Q96T68 719 aa17.42■□□□□ 0.38
NEDD4L-227ENST00000590020 TTC5Q8N0Z6 440 aa17.41■□□□□ 0.38
NEDD4L-227ENST00000590020 C7orf43Q8WVR3 580 aa17.41■□□□□ 0.38
NEDD4L-227ENST00000590020 ZNF496Q96IT1 587 aaPredicted RBP17.41■□□□□ 0.38
NEDD4L-227ENST00000590020 CCDC93Q567U6 631 aa17.4■□□□□ 0.38
NEDD4L-227ENST00000590020 PCDH10Q9P2E7 1040 aa17.4■□□□□ 0.38
NEDD4L-227ENST00000590020 CAMTA2O94983 1202 aa17.39■□□□□ 0.37
NEDD4L-227ENST00000590020 A1BGP04217 495 aa17.39■□□□□ 0.37
NEDD4L-227ENST00000590020 RGS19P49795 217 aa17.39■□□□□ 0.37
NEDD4L-227ENST00000590020 FKBP4Q02790 459 aaKnown RBP eCLIP17.39■□□□□ 0.37
NEDD4L-227ENST00000590020 CYP4F22Q6NT55 531 aa17.39■□□□□ 0.37
NEDD4L-227ENST00000590020 PIP4K2AP48426 406 aaPredicted RBP17.38■□□□□ 0.37
NEDD4L-227ENST00000590020 PNMA8AQ86V59 439 aaPredicted RBP17.38■□□□□ 0.37
NEDD4L-227ENST00000590020 CAPNS2Q96L46 248 aa17.38■□□□□ 0.37
NEDD4L-227ENST00000590020 DDX21Q9NR30 783 aaKnown RBP eCLIP17.38■□□□□ 0.37
NEDD4L-227ENST00000590020 BEGAINQ9BUH8 593 aa17.37■□□□□ 0.37
NEDD4L-227ENST00000590020 HEG1Q9ULI3 1381 aa17.37■□□□□ 0.37
NEDD4L-227ENST00000590020 THSD7BQ9C0I4 1608 aa17.36■□□□□ 0.37
NEDD4L-227ENST00000590020 BCORQ6W2J9 1755 aa17.36■□□□□ 0.37
NEDD4L-227ENST00000590020 AOC2O75106 756 aa17.36■□□□□ 0.37
NEDD4L-227ENST00000590020 IL6STP40189 918 aaPredicted RBP17.36■□□□□ 0.37
NEDD4L-227ENST00000590020 GPR101Q96P66 508 aaPredicted RBP17.36■□□□□ 0.37
NEDD4L-227ENST00000590020 LTBP1Q14766 1721 aa17.35■□□□□ 0.37
NEDD4L-227ENST00000590020 FZD9O00144 591 aa17.35■□□□□ 0.37
NEDD4L-227ENST00000590020 IARSP41252 1262 aaKnown RBP17.35■□□□□ 0.37
NEDD4L-227ENST00000590020 ZNF790Q6PG37 636 aa17.35■□□□□ 0.37
NEDD4L-227ENST00000590020 NBPF5PQ86XG9 351 aaPredicted RBP17.35■□□□□ 0.37
NEDD4L-227ENST00000590020 DZIP3Q86Y13 1208 aaKnown RBP17.35■□□□□ 0.37
NEDD4L-227ENST00000590020 SYNE4Q8N205 404 aa17.35■□□□□ 0.37
NEDD4L-227ENST00000590020 GJA3Q9Y6H8 435 aa17.35■□□□□ 0.37
NEDD4L-227ENST00000590020 FAM177BA6PVY3 158 aa17.34■□□□□ 0.37
NEDD4L-227ENST00000590020 TRAF5O00463 557 aa17.34■□□□□ 0.37
NEDD4L-227ENST00000590020 NPR1P16066 1061 aa17.34■□□□□ 0.37
NEDD4L-227ENST00000590020 MAPK8IP2Q13387 824 aaPredicted RBP17.34■□□□□ 0.37
NEDD4L-227ENST00000590020 NPM2Q86SE8 214 aaKnown RBP17.34■□□□□ 0.37
NEDD4L-227ENST00000590020 MCOLN1Q9GZU1 580 aa17.34■□□□□ 0.37
NEDD4L-227ENST00000590020 KCNQ3O43525 872 aa17.33■□□□□ 0.36
NEDD4L-227ENST00000590020 GPC2Q8N158 579 aa17.33■□□□□ 0.36
NEDD4L-227ENST00000590020 COL4A5P29400 1685 aa17.32■□□□□ 0.36
NEDD4L-227ENST00000590020 EPS15P42566 896 aa17.32■□□□□ 0.36
NEDD4L-227ENST00000590020 ECE1P42892 770 aa17.32■□□□□ 0.36
NEDD4L-227ENST00000590020 TEFQ10587 303 aa17.32■□□□□ 0.36
NEDD4L-227ENST00000590020 CST9Q5W186 159 aa17.32■□□□□ 0.36
NEDD4L-227ENST00000590020 RTKN2Q8IZC4 609 aa17.32■□□□□ 0.36
NEDD4L-227ENST00000590020 IL17REQ8NFR9 667 aa17.32■□□□□ 0.36
NEDD4L-227ENST00000590020 TEX13AQ9BXU3 409 aaPredicted RBP17.32■□□□□ 0.36
NEDD4L-227ENST00000590020 SIPA1L3O60292 1781 aaPredicted RBP17.3■□□□□ 0.36
NEDD4L-227ENST00000590020 PRAMEF22A3QJZ6 481 aa17.3■□□□□ 0.36
NEDD4L-227ENST00000590020 SLC51AQ86UW1 340 aa17.3■□□□□ 0.36
NEDD4L-227ENST00000590020 JDP2Q8WYK2 163 aa17.3■□□□□ 0.36
NEDD4L-227ENST00000590020 CASP8AP2Q9UKL3 1982 aa17.29■□□□□ 0.36
NEDD4L-227ENST00000590020 LMOD1P29536 600 aaPredicted RBP17.29■□□□□ 0.36
NEDD4L-227ENST00000590020 FMNL2Q96PY5 1086 aa17.29■□□□□ 0.36
NEDD4L-227ENST00000590020 USP16Q9Y5T5 823 aa17.29■□□□□ 0.36
NEDD4L-227ENST00000590020 TLL2Q9Y6L7 1015 aa17.29■□□□□ 0.36
NEDD4L-227ENST00000590020 TRPM7Q96QT4 1865 aa17.29■□□□□ 0.36
NEDD4L-227ENST00000590020 KLRG2A4D1S0 409 aaPredicted RBP17.28■□□□□ 0.36
NEDD4L-227ENST00000590020 SCNN1DP51172 638 aa17.28■□□□□ 0.36
NEDD4L-227ENST00000590020 EIF6P56537 245 aaKnown RBP17.28■□□□□ 0.36
NEDD4L-227ENST00000590020 NIP7Q9Y221 180 aaKnown RBP eCLIP17.28■□□□□ 0.36
NEDD4L-227ENST00000590020 KNSTRNQ9Y448 316 aa17.28■□□□□ 0.36
NEDD4L-227ENST00000590020 TNRC18O15417 2968 aaPredicted RBP17.28■□□□□ 0.36
NEDD4L-227ENST00000590020 DGKZQ13574 1117 aa17.27■□□□□ 0.36
NEDD4L-227ENST00000590020 GNAT3A8MTJ3 354 aa17.26■□□□□ 0.35
NEDD4L-227ENST00000590020 DIAPH1O60610 1272 aaKnown RBP17.26■□□□□ 0.35
NEDD4L-227ENST00000590020 HSPA5P11021 654 aaKnown RBP17.26■□□□□ 0.35
NEDD4L-227ENST00000590020 TPTE2Q6XPS3 522 aa17.26■□□□□ 0.35
NEDD4L-227ENST00000590020 SNED1Q8TER0 1413 aa17.26■□□□□ 0.35
NEDD4L-227ENST00000590020 ALDH1B1P30837 517 aa17.25■□□□□ 0.35
NEDD4L-227ENST00000590020 MAP2K2P36507 400 aa17.25■□□□□ 0.35
NEDD4L-227ENST00000590020 CLEC4GQ6UXB4 293 aa17.25■□□□□ 0.35
NEDD4L-227ENST00000590020 PSMD1Q99460 953 aa17.25■□□□□ 0.35
NEDD4L-227ENST00000590020 BTBD11A6QL63 1104 aa17.24■□□□□ 0.35
NEDD4L-227ENST00000590020 TCERG1O14776 1098 aaKnown RBP17.24■□□□□ 0.35
NEDD4L-227ENST00000590020 CELF2O95319 508 aaKnown RBP17.24■□□□□ 0.35
NEDD4L-227ENST00000590020 ZNF652Q9Y2D9 606 aa17.24■□□□□ 0.35
NEDD4L-227ENST00000590020 GTF2E1P29083 439 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms