RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 PRKRIP1Q9H875 184 aaPredicted RBP22.25■■□□□ 1.15
CROCCP3-203ENST00000589964 ADAMTS8Q9UP79 889 aa22.25■■□□□ 1.15
CROCCP3-203ENST00000589964 TNRC6CQ9HCJ0 1690 aaKnown RBP22.24■■□□□ 1.15
CROCCP3-203ENST00000589964 ANXA1P04083 346 aa22.24■■□□□ 1.15
CROCCP3-203ENST00000589964 NEFMP07197 916 aa22.24■■□□□ 1.15
CROCCP3-203ENST00000589964 CCDC184Q52MB2 194 aa22.24■■□□□ 1.15
CROCCP3-203ENST00000589964 TTLL6Q8N841 843 aa22.24■■□□□ 1.15
CROCCP3-203ENST00000589964 BRIP1Q9BX63 1249 aa22.24■■□□□ 1.15
CROCCP3-203ENST00000589964 TRIM35Q9UPQ4 493 aa22.24■■□□□ 1.15
CROCCP3-203ENST00000589964 SLX4Q8IY92 1834 aa22.24■■□□□ 1.15
CROCCP3-203ENST00000589964 H0YIN7 160 aa22.23■■□□□ 1.15
CROCCP3-203ENST00000589964 MYL6BP14649 208 aa22.23■■□□□ 1.15
CROCCP3-203ENST00000589964 LRP10Q7Z4F1 713 aa22.23■■□□□ 1.15
CROCCP3-203ENST00000589964 ZNF622Q969S3 477 aaKnown RBP eCLIP22.23■■□□□ 1.15
CROCCP3-203ENST00000589964 ABCC12Q96J65 1359 aa22.23■■□□□ 1.15
CROCCP3-203ENST00000589964 CACNA1SQ13698 1873 aa22.22■■□□□ 1.15
CROCCP3-203ENST00000589964 TSPYL4Q9UJ04 414 aa22.22■■□□□ 1.15
CROCCP3-203ENST00000589964 C21orf2O43822 256 aa22.21■■□□□ 1.15
CROCCP3-203ENST00000589964 PDIA6Q15084 440 aa22.21■■□□□ 1.15
CROCCP3-203ENST00000589964 OLFM4Q6UX06 510 aa22.21■■□□□ 1.15
CROCCP3-203ENST00000589964 PNISRQ8TF01 805 aaKnown RBP22.21■■□□□ 1.15
CROCCP3-203ENST00000589964 NIP7Q9Y221 180 aaKnown RBP eCLIP22.21■■□□□ 1.15
CROCCP3-203ENST00000589964 NBPF5PQ86XG9 351 aaPredicted RBP22.2■■□□□ 1.14
CROCCP3-203ENST00000589964 NECTIN2Q92692 538 aa22.2■■□□□ 1.14
CROCCP3-203ENST00000589964 ZBTB3Q9H5J0 574 aa22.2■■□□□ 1.14
CROCCP3-203ENST00000589964 SRGNP10124 158 aa22.19■■□□□ 1.14
CROCCP3-203ENST00000589964 UBN2Q6ZU65 1347 aa22.19■■□□□ 1.14
CROCCP3-203ENST00000589964 CLEC4GQ6UXB4 293 aa22.18■■□□□ 1.14
CROCCP3-203ENST00000589964 NPM2Q86SE8 214 aaKnown RBP22.18■■□□□ 1.14
CROCCP3-203ENST00000589964 NUP98P52948 1817 aa22.17■■□□□ 1.14
CROCCP3-203ENST00000589964 MAP3K15Q6ZN16 1313 aa22.17■■□□□ 1.14
CROCCP3-203ENST00000589964 EIF2S2P20042 333 aaKnown RBP22.17■■□□□ 1.14
CROCCP3-203ENST00000589964 GPTP24298 496 aa22.17■■□□□ 1.14
CROCCP3-203ENST00000589964 PDE6BP35913 854 aa22.17■■□□□ 1.14
CROCCP3-203ENST00000589964 PRPF40BQ6NWY9 871 aaKnown RBP22.17■■□□□ 1.14
CROCCP3-203ENST00000589964 NUTM1Q86Y26 1132 aa22.17■■□□□ 1.14
CROCCP3-203ENST00000589964 RUNDC1Q96C34 613 aa22.17■■□□□ 1.14
CROCCP3-203ENST00000589964 TIAM2Q8IVF5 1701 aa22.17■■□□□ 1.14
CROCCP3-203ENST00000589964 CCDC88AQ3V6T2 1871 aa22.16■■□□□ 1.14
CROCCP3-203ENST00000589964 PNNQ9H307 717 aaKnown RBP22.16■■□□□ 1.14
CROCCP3-203ENST00000589964 FER1L6Q2WGJ9 1857 aa22.15■■□□□ 1.14
CROCCP3-203ENST00000589964 NPHP1O15259 732 aa22.15■■□□□ 1.14
CROCCP3-203ENST00000589964 ST5P78524 1137 aa22.15■■□□□ 1.14
CROCCP3-203ENST00000589964 WDR43Q15061 677 aaKnown RBP eCLIP22.15■■□□□ 1.14
CROCCP3-203ENST00000589964 C3orf67Q6ZVT6 689 aa22.15■■□□□ 1.14
CROCCP3-203ENST00000589964 ZNF652Q9Y2D9 606 aa22.15■■□□□ 1.14
CROCCP3-203ENST00000589964 CHL1O00533 1208 aa22.14■■□□□ 1.13
CROCCP3-203ENST00000589964 ZNF428Q96B54 188 aa22.14■■□□□ 1.13
CROCCP3-203ENST00000589964 LAS1LQ9Y4W2 734 aaKnown RBP22.14■■□□□ 1.13
CROCCP3-203ENST00000589964 ARFGEF2Q9Y6D5 1785 aa22.13■■□□□ 1.13
CROCCP3-203ENST00000589964 LMNB1P20700 586 aa22.13■■□□□ 1.13
CROCCP3-203ENST00000589964 ERFEQ4G0M1 354 aa22.13■■□□□ 1.13
CROCCP3-203ENST00000589964 STYK1Q6J9G0 422 aa22.13■■□□□ 1.13
CROCCP3-203ENST00000589964 C7orf43Q8WVR3 580 aa22.13■■□□□ 1.13
CROCCP3-203ENST00000589964 KLRG2A4D1S0 409 aaPredicted RBP22.12■■□□□ 1.13
CROCCP3-203ENST00000589964 SUSD4Q5VX71 490 aa22.12■■□□□ 1.13
CROCCP3-203ENST00000589964 RRAGCQ9HB90 399 aa22.12■■□□□ 1.13
CROCCP3-203ENST00000589964 ERVV-1B6SEH8 477 aa22.11■■□□□ 1.13
CROCCP3-203ENST00000589964 MASTLQ96GX5 879 aa22.11■■□□□ 1.13
CROCCP3-203ENST00000589964 APAF1O14727 1248 aa22.1■■□□□ 1.13
CROCCP3-203ENST00000589964 ZNF34Q8IZ26 560 aa22.1■■□□□ 1.13
CROCCP3-203ENST00000589964 NTSR2O95665 410 aa22.09■■□□□ 1.13
CROCCP3-203ENST00000589964 HSPA6P17066 643 aa22.09■■□□□ 1.13
CROCCP3-203ENST00000589964 LMOD3Q0VAK6 560 aa22.09■■□□□ 1.13
CROCCP3-203ENST00000589964 KIF6Q6ZMV9 814 aa22.09■■□□□ 1.13
CROCCP3-203ENST00000589964 SYNE4Q8N205 404 aa22.09■■□□□ 1.13
CROCCP3-203ENST00000589964 RGL2O15211 777 aa22.08■■□□□ 1.13
CROCCP3-203ENST00000589964 TPTE2Q6XPS3 522 aa22.08■■□□□ 1.13
CROCCP3-203ENST00000589964 XAGE3Q8WTP9 111 aa22.08■■□□□ 1.13
CROCCP3-203ENST00000589964 CNKSR1Q969H4 720 aa22.08■■□□□ 1.13
CROCCP3-203ENST00000589964 ERBB4Q15303 1308 aa22.07■■□□□ 1.12
CROCCP3-203ENST00000589964 SNED1Q8TER0 1413 aa22.07■■□□□ 1.12
CROCCP3-203ENST00000589964 POTECB2RU33 542 aa22.07■■□□□ 1.12
CROCCP3-203ENST00000589964 NPR1P16066 1061 aa22.07■■□□□ 1.12
CROCCP3-203ENST00000589964 HTRA3P83110 453 aa22.07■■□□□ 1.12
CROCCP3-203ENST00000589964 AIMP1Q12904 312 aaKnown RBP22.07■■□□□ 1.12
CROCCP3-203ENST00000589964 GIGYF2Q6Y7W6 1299 aaKnown RBP22.07■■□□□ 1.12
CROCCP3-203ENST00000589964 CHPF2Q9P2E5 772 aa22.07■■□□□ 1.12
CROCCP3-203ENST00000589964 COPS6Q7L5N1 327 aa22.06■■□□□ 1.12
CROCCP3-203ENST00000589964 MBIPQ9NS73 344 aa22.06■■□□□ 1.12
CROCCP3-203ENST00000589964 BABAM1Q9NWV8 329 aa22.06■■□□□ 1.12
CROCCP3-203ENST00000589964 PDZRN3Q9UPQ7 1066 aa22.06■■□□□ 1.12
CROCCP3-203ENST00000589964 COL4A5P29400 1685 aa22.05■■□□□ 1.12
CROCCP3-203ENST00000589964 TOMM70O94826 608 aa22.05■■□□□ 1.12
CROCCP3-203ENST00000589964 CRY2Q49AN0 593 aa22.05■■□□□ 1.12
CROCCP3-203ENST00000589964 TAOK3Q9H2K8 898 aa22.05■■□□□ 1.12
CROCCP3-203ENST00000589964 GLTPD2A6NH11 291 aa22.04■■□□□ 1.12
CROCCP3-203ENST00000589964 ZNF853P0CG23 659 aa22.04■■□□□ 1.12
CROCCP3-203ENST00000589964 DICER1Q9UPY3 1922 aaKnown RBP22.04■■□□□ 1.12
CROCCP3-203ENST00000589964 KDM2BQ8NHM5 1336 aa22.04■■□□□ 1.12
CROCCP3-203ENST00000589964 LTBP3Q9NS15 1303 aa22.04■■□□□ 1.12
CROCCP3-203ENST00000589964 ZNF277Q9NRM2 450 aaPredicted RBP22.03■■□□□ 1.12
CROCCP3-203ENST00000589964 GTF2E1P29083 439 aaPredicted RBP22.02■■□□□ 1.12
CROCCP3-203ENST00000589964 COL4A1P02462 1669 aa22.01■■□□□ 1.11
CROCCP3-203ENST00000589964 IBTKQ9P2D0 1353 aaPredicted RBP22.01■■□□□ 1.11
CROCCP3-203ENST00000589964 DUSP27Q5VZP5 1158 aa22.01■■□□□ 1.11
CROCCP3-203ENST00000589964 DDX21Q9NR30 783 aaKnown RBP eCLIP22.01■■□□□ 1.11
CROCCP3-203ENST00000589964 ANKRD36CQ5JPF3 1778 aa22.01■■□□□ 1.11
CROCCP3-203ENST00000589964 RIC1Q4ADV7 1423 aa22■■□□□ 1.11
CROCCP3-203ENST00000589964 CCDC93Q567U6 631 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms