RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 NBPF5PQ86XG9 351 aaPredicted RBP16.13■□□□□ 0.17
VAT1-206ENST00000589709 ANKRD31Q8N7Z5 1873 aa16.13■□□□□ 0.17
VAT1-206ENST00000589709 KLRG2A4D1S0 409 aaPredicted RBP16.12■□□□□ 0.17
VAT1-206ENST00000589709 PRELPP51888 382 aa16.12■□□□□ 0.17
VAT1-206ENST00000589709 DDX10Q13206 875 aaKnown RBP16.12■□□□□ 0.17
VAT1-206ENST00000589709 TPTE2Q6XPS3 522 aa16.12■□□□□ 0.17
VAT1-206ENST00000589709 RBM46Q8TBY0 533 aaKnown RBP16.12■□□□□ 0.17
VAT1-206ENST00000589709 THUMPD2Q9BTF0 503 aaKnown RBP16.12■□□□□ 0.17
VAT1-206ENST00000589709 BCORQ6W2J9 1755 aa16.12■□□□□ 0.17
VAT1-206ENST00000589709 ERVV-1B6SEH8 477 aa16.11■□□□□ 0.17
VAT1-206ENST00000589709 MASTLQ96GX5 879 aa16.11■□□□□ 0.17
VAT1-206ENST00000589709 BABAM1Q9NWV8 329 aa16.11■□□□□ 0.17
VAT1-206ENST00000589709 NIP7Q9Y221 180 aaKnown RBP eCLIP16.11■□□□□ 0.17
VAT1-206ENST00000589709 DLG5Q8TDM6 1919 aa16.11■□□□□ 0.17
VAT1-206ENST00000589709 GLTPD2A6NH11 291 aa16.1■□□□□ 0.17
VAT1-206ENST00000589709 C21orf2O43822 256 aa16.1■□□□□ 0.17
VAT1-206ENST00000589709 RIPK4P57078 832 aa16.1■□□□□ 0.17
VAT1-206ENST00000589709 HLFQ16534 295 aa16.1■□□□□ 0.17
VAT1-206ENST00000589709 C16orf71Q8IYS4 520 aaPredicted RBP16.1■□□□□ 0.17
VAT1-206ENST00000589709 RRAGCQ9HB90 399 aa16.1■□□□□ 0.17
VAT1-206ENST00000589709 MYBBP1AQ9BQG0 1328 aaKnown RBP16.1■□□□□ 0.17
VAT1-206ENST00000589709 LTBP3Q9NS15 1303 aa16.1■□□□□ 0.17
VAT1-206ENST00000589709 KDM3BQ7LBC6 1761 aa16.09■□□□□ 0.17
VAT1-206ENST00000589709 APLP1P51693 650 aa16.09■□□□□ 0.17
VAT1-206ENST00000589709 SOGA3Q5TF21 947 aa16.09■□□□□ 0.17
VAT1-206ENST00000589709 ERBB4Q15303 1308 aa16.09■□□□□ 0.17
VAT1-206ENST00000589709 NPR1P16066 1061 aa16.08■□□□□ 0.16
VAT1-206ENST00000589709 TMPOP42166 694 aaKnown RBP16.08■□□□□ 0.16
VAT1-206ENST00000589709 LMOD3Q0VAK6 560 aa16.08■□□□□ 0.16
VAT1-206ENST00000589709 FSTL1Q12841 308 aa16.08■□□□□ 0.16
VAT1-206ENST00000589709 PRPF40BQ6NWY9 871 aaKnown RBP16.08■□□□□ 0.16
VAT1-206ENST00000589709 C7orf43Q8WVR3 580 aa16.07■□□□□ 0.16
VAT1-206ENST00000589709 TAOK3Q9H2K8 898 aa16.07■□□□□ 0.16
VAT1-206ENST00000589709 ZNF219Q9P2Y4 722 aaPredicted RBP16.07■□□□□ 0.16
VAT1-206ENST00000589709 TSPYL4Q9UJ04 414 aa16.07■□□□□ 0.16
VAT1-206ENST00000589709 RRP7AQ9Y3A4 280 aaKnown RBP16.07■□□□□ 0.16
VAT1-206ENST00000589709 MAP3K15Q6ZN16 1313 aa16.07■□□□□ 0.16
VAT1-206ENST00000589709 COL11A2P13942 1736 aaPredicted RBP16.07■□□□□ 0.16
VAT1-206ENST00000589709 LAMB4A4D0S4 1761 aa16.07■□□□□ 0.16
VAT1-206ENST00000589709 VEGFAP15692 232 aaPredicted RBP16.06■□□□□ 0.16
VAT1-206ENST00000589709 KIF6Q6ZMV9 814 aa16.06■□□□□ 0.16
VAT1-206ENST00000589709 NGEFQ8N5V2 710 aa16.06■□□□□ 0.16
VAT1-206ENST00000589709 GTF2E1P29083 439 aaPredicted RBP16.05■□□□□ 0.16
VAT1-206ENST00000589709 DPY19L2Q6NUT2 758 aa16.05■□□□□ 0.16
VAT1-206ENST00000589709 TTLL7Q6ZT98 887 aa16.05■□□□□ 0.16
VAT1-206ENST00000589709 NYXQ9GZU5 481 aa16.05■□□□□ 0.16
VAT1-206ENST00000589709 FER1L6Q2WGJ9 1857 aa16.04■□□□□ 0.16
VAT1-206ENST00000589709 SLX4Q8IY92 1834 aa16.04■□□□□ 0.16
VAT1-206ENST00000589709 MYL6BP14649 208 aa16.04■□□□□ 0.16
VAT1-206ENST00000589709 ERFEQ4G0M1 354 aa16.04■□□□□ 0.16
VAT1-206ENST00000589709 TNRC6CQ9HCJ0 1690 aaKnown RBP16.04■□□□□ 0.16
VAT1-206ENST00000589709 FAM177BA6PVY3 158 aa16.03■□□□□ 0.16
VAT1-206ENST00000589709 ALDH1B1P30837 517 aa16.03■□□□□ 0.16
VAT1-206ENST00000589709 CRY2Q49AN0 593 aa16.03■□□□□ 0.16
VAT1-206ENST00000589709 CCDC93Q567U6 631 aa16.03■□□□□ 0.16
VAT1-206ENST00000589709 LRP10Q7Z4F1 713 aa16.03■□□□□ 0.16
VAT1-206ENST00000589709 ZNF34Q8IZ26 560 aa16.03■□□□□ 0.16
VAT1-206ENST00000589709 DNAJC5GQ8N7S2 189 aa16.03■□□□□ 0.16
VAT1-206ENST00000589709 SMC1BQ8NDV3 1235 aa16.03■□□□□ 0.16
VAT1-206ENST00000589709 RUNDC1Q96C34 613 aa16.03■□□□□ 0.16
VAT1-206ENST00000589709 IBTKQ9P2D0 1353 aaPredicted RBP16.02■□□□□ 0.16
VAT1-206ENST00000589709 CHL1O00533 1208 aa16.02■□□□□ 0.16
VAT1-206ENST00000589709 PDIA6Q15084 440 aa16.02■□□□□ 0.16
VAT1-206ENST00000589709 GIGYF2Q6Y7W6 1299 aaKnown RBP16.02■□□□□ 0.16
VAT1-206ENST00000589709 ZBTB3Q9H5J0 574 aa16.02■□□□□ 0.16
VAT1-206ENST00000589709 CCDC88AQ3V6T2 1871 aa16.01■□□□□ 0.15
VAT1-206ENST00000589709 ARFGEF2Q9Y6D5 1785 aa16.01■□□□□ 0.15
VAT1-206ENST00000589709 POTECB2RU33 542 aa16.01■□□□□ 0.15
VAT1-206ENST00000589709 WDR43Q15061 677 aaKnown RBP eCLIP16.01■□□□□ 0.15
VAT1-206ENST00000589709 RTKN2Q8IZC4 609 aa16.01■□□□□ 0.15
VAT1-206ENST00000589709 ADAMTS8Q9UP79 889 aa16.01■□□□□ 0.15
VAT1-206ENST00000589709 RIC1Q4ADV7 1423 aa16.01■□□□□ 0.15
VAT1-206ENST00000589709 UBN2Q6ZU65 1347 aa16■□□□□ 0.15
VAT1-206ENST00000589709 EIF2S2P20042 333 aaKnown RBP16■□□□□ 0.15
VAT1-206ENST00000589709 GPTP24298 496 aa16■□□□□ 0.15
VAT1-206ENST00000589709 HOXA10P31260 410 aaPredicted RBP16■□□□□ 0.15
VAT1-206ENST00000589709 PARP10Q53GL7 1025 aa16■□□□□ 0.15
VAT1-206ENST00000589709 SUSD4Q5VX71 490 aa16■□□□□ 0.15
VAT1-206ENST00000589709 NUTM1Q86Y26 1132 aa16■□□□□ 0.15
VAT1-206ENST00000589709 CCDC146Q8IYE0 955 aa16■□□□□ 0.15
VAT1-206ENST00000589709 PRKRIP1Q9H875 184 aaPredicted RBP16■□□□□ 0.15
VAT1-206ENST00000589709 TRIM35Q9UPQ4 493 aa16■□□□□ 0.15
VAT1-206ENST00000589709 DICER1Q9UPY3 1922 aaKnown RBP16■□□□□ 0.15
VAT1-206ENST00000589709 NUP98P52948 1817 aa15.99■□□□□ 0.15
VAT1-206ENST00000589709 FKBP4Q02790 459 aaKnown RBP eCLIP15.99■□□□□ 0.15
VAT1-206ENST00000589709 NEUROD2Q15784 382 aa15.99■□□□□ 0.15
VAT1-206ENST00000589709 CC2D2BQ6DHV5 1058 aa15.99■□□□□ 0.15
VAT1-206ENST00000589709 TIAM2Q8IVF5 1701 aa15.99■□□□□ 0.15
VAT1-206ENST00000589709 ABCC12Q96J65 1359 aa15.99■□□□□ 0.15
VAT1-206ENST00000589709 NTSR2O95665 410 aa15.98■□□□□ 0.15
VAT1-206ENST00000589709 PPP1R42Q7Z4L9 355 aa15.98■□□□□ 0.15
VAT1-206ENST00000589709 WDR90Q96KV7 1748 aa15.98■□□□□ 0.15
VAT1-206ENST00000589709 PROSER3Q2NL68 480 aa15.97■□□□□ 0.15
VAT1-206ENST00000589709 GRIPAP1Q4V328 841 aa15.97■□□□□ 0.15
VAT1-206ENST00000589709 SLC10A5Q5PT55 438 aa15.97■□□□□ 0.15
VAT1-206ENST00000589709 DDX21Q9NR30 783 aaKnown RBP eCLIP15.97■□□□□ 0.15
VAT1-206ENST00000589709 DDNO94850 711 aaPredicted RBP15.96■□□□□ 0.15
VAT1-206ENST00000589709 HOXB7P09629 217 aa15.96■□□□□ 0.15
VAT1-206ENST00000589709 HSP90AB3PQ58FF7 597 aa15.96■□□□□ 0.15
VAT1-206ENST00000589709 OLFM4Q6UX06 510 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms