RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 NANOS1Q8WY41 292 aaKnown RBP8.37□□□□□ -1.07
DNMT1-220ENST00000589351 C8orf37Q96NL8 207 aa8.37□□□□□ -1.07
DNMT1-220ENST00000589351 TBC1D2Q9BYX2 928 aa8.37□□□□□ -1.07
DNMT1-220ENST00000589351 SETD1AO15047 1707 aaKnown RBP8.37□□□□□ -1.07
DNMT1-220ENST00000589351 PER1O15534 1290 aaPredicted RBP8.36□□□□□ -1.07
DNMT1-220ENST00000589351 HRCP23327 699 aa8.36□□□□□ -1.07
DNMT1-220ENST00000589351 FSHRP23945 695 aa8.36□□□□□ -1.07
DNMT1-220ENST00000589351 GJA5P36382 358 aa8.36□□□□□ -1.07
DNMT1-220ENST00000589351 TTLL12Q14166 644 aaPredicted RBP8.36□□□□□ -1.07
DNMT1-220ENST00000589351 BEGAINQ9BUH8 593 aa8.36□□□□□ -1.07
DNMT1-220ENST00000589351 PTPRUQ92729 1446 aa8.36□□□□□ -1.07
DNMT1-220ENST00000589351 ARHGEF15O94989 841 aa8.35□□□□□ -1.07
DNMT1-220ENST00000589351 GIGYF2Q6Y7W6 1299 aaKnown RBP8.35□□□□□ -1.07
DNMT1-220ENST00000589351 CCDC155Q8N6L0 562 aa8.35□□□□□ -1.07
DNMT1-220ENST00000589351 C1QTNF2Q9BXJ5 285 aa8.35□□□□□ -1.07
DNMT1-220ENST00000589351 DNMT3AQ9Y6K1 912 aaPredicted RBP8.35□□□□□ -1.07
DNMT1-220ENST00000589351 MST1RQ04912 1400 aa8.35□□□□□ -1.07
DNMT1-220ENST00000589351 ASXL1Q8IXJ9 1541 aa8.34□□□□□ -1.07
DNMT1-220ENST00000589351 ADAMTS2O95450 1211 aa8.34□□□□□ -1.07
DNMT1-220ENST00000589351 SH3RF1Q7Z6J0 888 aa8.34□□□□□ -1.07
DNMT1-220ENST00000589351 MAP4K5Q9Y4K4 846 aa8.34□□□□□ -1.07
DNMT1-220ENST00000589351 ADGRL3Q9HAR2 1447 aa8.34□□□□□ -1.07
DNMT1-220ENST00000589351 SETBP1Q9Y6X0 1596 aa8.34□□□□□ -1.07
DNMT1-220ENST00000589351 METP08581 1390 aa8.34□□□□□ -1.07
DNMT1-220ENST00000589351 RPGRIP1LQ68CZ1 1315 aa8.33□□□□□ -1.08
DNMT1-220ENST00000589351 SLURP2P0DP57 97 aa8.33□□□□□ -1.08
DNMT1-220ENST00000589351 VASH1Q7L8A9 365 aaPredicted RBP8.33□□□□□ -1.08
DNMT1-220ENST00000589351 CABLES1Q8TDN4 633 aa8.33□□□□□ -1.08
DNMT1-220ENST00000589351 ZBTB3Q9H5J0 574 aa8.33□□□□□ -1.08
DNMT1-220ENST00000589351 USP21Q9UK80 565 aa8.33□□□□□ -1.08
DNMT1-220ENST00000589351 TRPC5Q9UL62 973 aaPredicted RBP8.33□□□□□ -1.08
DNMT1-220ENST00000589351 EMILIN1Q9Y6C2 1016 aa8.33□□□□□ -1.08
DNMT1-220ENST00000589351 SPHKAPQ2M3C7 1700 aa8.32□□□□□ -1.08
DNMT1-220ENST00000589351 IGHA1P01876 353 aa8.32□□□□□ -1.08
DNMT1-220ENST00000589351 VWA5B2Q8N398 1253 aa8.32□□□□□ -1.08
DNMT1-220ENST00000589351 PNPLA6Q8IY17 1366 aa8.32□□□□□ -1.08
DNMT1-220ENST00000589351 NHSL1Q5SYE7 1610 aa8.32□□□□□ -1.08
DNMT1-220ENST00000589351 XRN1Q8IZH2 1706 aaKnown RBP8.32□□□□□ -1.08
DNMT1-220ENST00000589351 SLC35F4A4IF30 521 aa8.31□□□□□ -1.08
DNMT1-220ENST00000589351 CBLBQ13191 982 aa8.31□□□□□ -1.08
DNMT1-220ENST00000589351 AMHR2Q16671 573 aa8.31□□□□□ -1.08
DNMT1-220ENST00000589351 CCDC125Q86Z20 511 aa8.31□□□□□ -1.08
DNMT1-220ENST00000589351 CCDC116Q8IYX3 515 aa8.31□□□□□ -1.08
DNMT1-220ENST00000589351 DDX17Q92841 729 aaKnown RBP8.31□□□□□ -1.08
DNMT1-220ENST00000589351 ATAD2Q6PL18 1390 aa8.31□□□□□ -1.08
DNMT1-220ENST00000589351 KIF1BO60333 1816 aa8.31□□□□□ -1.08
DNMT1-220ENST00000589351 NPHP3Q7Z494 1330 aa8.3□□□□□ -1.08
DNMT1-220ENST00000589351 MARSP56192 900 aaKnown RBP8.3□□□□□ -1.08
DNMT1-220ENST00000589351 ESCO1Q5FWF5 840 aa8.3□□□□□ -1.08
DNMT1-220ENST00000589351 SH3BP5LQ7L8J4 393 aa8.3□□□□□ -1.08
DNMT1-220ENST00000589351 TRMT44Q8IYL2 757 aaKnown RBP8.3□□□□□ -1.08
DNMT1-220ENST00000589351 ORAI2Q96SN7 254 aa8.3□□□□□ -1.08
DNMT1-220ENST00000589351 PODXL2Q9NZ53 605 aa8.3□□□□□ -1.08
DNMT1-220ENST00000589351 LRPPRCP42704 1394 aaKnown RBP8.3□□□□□ -1.08
DNMT1-220ENST00000589351 C1orf167Q5SNV9 1468 aa8.3□□□□□ -1.08
DNMT1-220ENST00000589351 PTCH1Q13635 1447 aa8.29□□□□□ -1.08
DNMT1-220ENST00000589351 NRXN3Q9Y4C0 1643 aa8.29□□□□□ -1.08
DNMT1-220ENST00000589351 MAGEB6P1A0A0J9YX57 407 aa8.29□□□□□ -1.08
DNMT1-220ENST00000589351 SPINT1O43278 529 aa8.29□□□□□ -1.08
DNMT1-220ENST00000589351 ITGA6P23229 1130 aa8.29□□□□□ -1.08
DNMT1-220ENST00000589351 DIXDC1Q155Q3 683 aa8.29□□□□□ -1.08
DNMT1-220ENST00000589351 PRPF38BQ5VTL8 546 aaKnown RBP8.29□□□□□ -1.08
DNMT1-220ENST00000589351 KANK3Q6NY19 840 aa8.29□□□□□ -1.08
DNMT1-220ENST00000589351 PPARGC1BQ86YN6 1023 aaKnown RBP8.29□□□□□ -1.08
DNMT1-220ENST00000589351 FNBP4Q8N3X1 1017 aaPredicted RBP8.29□□□□□ -1.08
DNMT1-220ENST00000589351 HFM1A2PYH4 1435 aa8.29□□□□□ -1.08
DNMT1-220ENST00000589351 CDC14CA4D256 554 aa8.28□□□□□ -1.08
DNMT1-220ENST00000589351 CSPP1Q1MSJ5 1256 aa8.28□□□□□ -1.08
DNMT1-220ENST00000589351 PPP1R26Q5T8A7 1209 aaPredicted RBP8.28□□□□□ -1.08
DNMT1-220ENST00000589351 Q6ZVU0 165 aa8.28□□□□□ -1.08
DNMT1-220ENST00000589351 SV2AQ7L0J3 742 aa8.28□□□□□ -1.08
DNMT1-220ENST00000589351 RIC3Q7Z5B4 369 aa8.28□□□□□ -1.08
DNMT1-220ENST00000589351 ARMC2Q8NEN0 867 aa8.28□□□□□ -1.08
DNMT1-220ENST00000589351 TSC1Q92574 1164 aa8.28□□□□□ -1.08
DNMT1-220ENST00000589351 NEXMIFQ5QGS0 1516 aa8.28□□□□□ -1.08
DNMT1-220ENST00000589351 RGS12O14924 1447 aa8.28□□□□□ -1.08
DNMT1-220ENST00000589351 FOXK2Q01167 660 aa8.27□□□□□ -1.09
DNMT1-220ENST00000589351 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.27□□□□□ -1.09
DNMT1-220ENST00000589351 NALCNQ8IZF0 1738 aa8.26□□□□□ -1.09
DNMT1-220ENST00000589351 ROBO2Q9HCK4 1378 aa8.26□□□□□ -1.09
DNMT1-220ENST00000589351 FOXO3O43524 673 aa8.26□□□□□ -1.09
DNMT1-220ENST00000589351 XP32Q5T750 250 aa8.26□□□□□ -1.09
DNMT1-220ENST00000589351 NBPF14Q5TI25 921 aa8.26□□□□□ -1.09
DNMT1-220ENST00000589351 LYPD4Q6UWN0 246 aa8.26□□□□□ -1.09
DNMT1-220ENST00000589351 BARGINQ6ZT62 677 aa8.26□□□□□ -1.09
DNMT1-220ENST00000589351 SCARF2Q96GP6 870 aaPredicted RBP8.26□□□□□ -1.09
DNMT1-220ENST00000589351 CARD14Q9BXL6 1004 aa8.26□□□□□ -1.09
DNMT1-220ENST00000589351 CLTCL1P53675 1640 aa8.25□□□□□ -1.09
DNMT1-220ENST00000589351 CTSOP43234 321 aaPredicted RBP8.25□□□□□ -1.09
DNMT1-220ENST00000589351 PSME1Q06323 249 aa8.25□□□□□ -1.09
DNMT1-220ENST00000589351 SF3B2Q13435 895 aaKnown RBP8.25□□□□□ -1.09
DNMT1-220ENST00000589351 GJD4Q96KN9 370 aaPredicted RBP8.25□□□□□ -1.09
DNMT1-220ENST00000589351 PGPEP1Q9NXJ5 209 aa8.25□□□□□ -1.09
DNMT1-220ENST00000589351 STK26Q9P289 416 aa8.25□□□□□ -1.09
DNMT1-220ENST00000589351 ACIN1Q9UKV3 1341 aaKnown RBP8.25□□□□□ -1.09
DNMT1-220ENST00000589351 NAIPQ13075 1403 aa8.24□□□□□ -1.09
DNMT1-220ENST00000589351 QPCTQ16769 361 aa8.24□□□□□ -1.09
DNMT1-220ENST00000589351 RGL3Q3MIN7 710 aa8.24□□□□□ -1.09
DNMT1-220ENST00000589351 ERFEQ4G0M1 354 aa8.24□□□□□ -1.09
DNMT1-220ENST00000589351 AGBL1Q96MI9 1066 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms