RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 MIS18AQ9NYP9 233 aa19.29■□□□□ 0.68
DNMT1-217ENST00000589091 ANKRD36CQ5JPF3 1778 aa19.29■□□□□ 0.68
DNMT1-217ENST00000589091 KDM2BQ8NHM5 1336 aa19.28■□□□□ 0.68
DNMT1-217ENST00000589091 NBPF26B4DH59 902 aa19.28■□□□□ 0.68
DNMT1-217ENST00000589091 LMOD3Q0VAK6 560 aa19.28■□□□□ 0.68
DNMT1-217ENST00000589091 NBPF10Q6P3W6 841 aaKnown RBP19.28■□□□□ 0.68
DNMT1-217ENST00000589091 NBPF15Q8N660 670 aa19.28■□□□□ 0.68
DNMT1-217ENST00000589091 EIF4A1P60842 406 aaKnown RBP19.27■□□□□ 0.68
DNMT1-217ENST00000589091 ZNF622Q969S3 477 aaKnown RBP eCLIP19.27■□□□□ 0.683e-10■□□□□ 10.5
DNMT1-217ENST00000589091 TOMM70O94826 608 aa19.26■□□□□ 0.67
DNMT1-217ENST00000589091 HSPA6P17066 643 aa19.26■□□□□ 0.67
DNMT1-217ENST00000589091 LMNB1P20700 586 aa19.26■□□□□ 0.67
DNMT1-217ENST00000589091 NBPF5PQ86XG9 351 aaPredicted RBP19.26■□□□□ 0.67
DNMT1-217ENST00000589091 RIPK4P57078 832 aa19.25■□□□□ 0.67
DNMT1-217ENST00000589091 RASSF7Q02833 373 aa19.25■□□□□ 0.67
DNMT1-217ENST00000589091 STYK1Q6J9G0 422 aa19.25■□□□□ 0.67
DNMT1-217ENST00000589091 CNKSR1Q969H4 720 aa19.25■□□□□ 0.67
DNMT1-217ENST00000589091 THUMPD2Q9BTF0 503 aaKnown RBP19.25■□□□□ 0.67
DNMT1-217ENST00000589091 BABAM1Q9NWV8 329 aa19.25■□□□□ 0.67
DNMT1-217ENST00000589091 NIP7Q9Y221 180 aaKnown RBP eCLIP19.25■□□□□ 0.67
DNMT1-217ENST00000589091 ERBB4Q15303 1308 aa19.25■□□□□ 0.67
DNMT1-217ENST00000589091 TPTE2Q6XPS3 522 aa19.24■□□□□ 0.67
DNMT1-217ENST00000589091 CCDC24Q8N4L8 307 aa19.24■□□□□ 0.67
DNMT1-217ENST00000589091 MASTLQ96GX5 879 aa19.24■□□□□ 0.67
DNMT1-217ENST00000589091 NMRK2Q9NPI5 230 aa19.24■□□□□ 0.67
DNMT1-217ENST00000589091 WDR90Q96KV7 1748 aa19.23■□□□□ 0.67
DNMT1-217ENST00000589091 ERVV-1B6SEH8 477 aa19.23■□□□□ 0.67
DNMT1-217ENST00000589091 SRGNP10124 158 aa19.23■□□□□ 0.67
DNMT1-217ENST00000589091 TMPOP42166 694 aaKnown RBP19.23■□□□□ 0.67
DNMT1-217ENST00000589091 TSPYL4Q9UJ04 414 aa19.23■□□□□ 0.67
DNMT1-217ENST00000589091 WDR43Q15061 677 aaKnown RBP eCLIP19.22■□□□□ 0.67
DNMT1-217ENST00000589091 SOGA3Q5TF21 947 aa19.22■□□□□ 0.67
DNMT1-217ENST00000589091 KIF6Q6ZMV9 814 aa19.22■□□□□ 0.67
DNMT1-217ENST00000589091 C16orf71Q8IYS4 520 aaPredicted RBP19.22■□□□□ 0.67
DNMT1-217ENST00000589091 NFKBIEO00221 500 aa19.21■□□□□ 0.67
DNMT1-217ENST00000589091 MAP3K15Q6ZN16 1313 aa19.21■□□□□ 0.67
DNMT1-217ENST00000589091 LTBP3Q9NS15 1303 aa19.21■□□□□ 0.67
DNMT1-217ENST00000589091 C21orf2O43822 256 aa19.2■□□□□ 0.66
DNMT1-217ENST00000589091 HLFQ16534 295 aa19.2■□□□□ 0.66
DNMT1-217ENST00000589091 RBM46Q8TBY0 533 aaKnown RBP19.2■□□□□ 0.66
DNMT1-217ENST00000589091 RUNDC1Q96C34 613 aa19.2■□□□□ 0.66
DNMT1-217ENST00000589091 NYXQ9GZU5 481 aa19.2■□□□□ 0.66
DNMT1-217ENST00000589091 RRP7AQ9Y3A4 280 aaKnown RBP19.2■□□□□ 0.66
DNMT1-217ENST00000589091 IBTKQ9P2D0 1353 aaPredicted RBP19.19■□□□□ 0.66
DNMT1-217ENST00000589091 NPR1P16066 1061 aa19.19■□□□□ 0.66
DNMT1-217ENST00000589091 PRPF40BQ6NWY9 871 aaKnown RBP19.19■□□□□ 0.66
DNMT1-217ENST00000589091 NGEFQ8N5V2 710 aa19.19■□□□□ 0.66
DNMT1-217ENST00000589091 LAMB2P55268 1798 aa19.19■□□□□ 0.66
DNMT1-217ENST00000589091 KLRG2A4D1S0 409 aaPredicted RBP19.18■□□□□ 0.66
DNMT1-217ENST00000589091 MYL6BP14649 208 aa19.18■□□□□ 0.66
DNMT1-217ENST00000589091 GTF2E1P29083 439 aaPredicted RBP19.18■□□□□ 0.66
DNMT1-217ENST00000589091 ZNF219Q9P2Y4 722 aaPredicted RBP19.18■□□□□ 0.66
DNMT1-217ENST00000589091 SCN4AP35499 1836 aa19.18■□□□□ 0.66
DNMT1-217ENST00000589091 RIC1Q4ADV7 1423 aa19.17■□□□□ 0.66
DNMT1-217ENST00000589091 GLTPD2A6NH11 291 aa19.17■□□□□ 0.66
DNMT1-217ENST00000589091 PRELPP51888 382 aa19.17■□□□□ 0.66
DNMT1-217ENST00000589091 TAOK3Q9H2K8 898 aa19.17■□□□□ 0.66
DNMT1-217ENST00000589091 PRKRIP1Q9H875 184 aaPredicted RBP19.17■□□□□ 0.66
DNMT1-217ENST00000589091 RRAGCQ9HB90 399 aa19.17■□□□□ 0.66
DNMT1-217ENST00000589091 FAM177BA6PVY3 158 aa19.16■□□□□ 0.66
DNMT1-217ENST00000589091 APLP1P51693 650 aa19.16■□□□□ 0.66
DNMT1-217ENST00000589091 TTLL7Q6ZT98 887 aa19.16■□□□□ 0.66
DNMT1-217ENST00000589091 CCDC146Q8IYE0 955 aa19.16■□□□□ 0.66
DNMT1-217ENST00000589091 ALDH1B1P30837 517 aa19.15■□□□□ 0.66
DNMT1-217ENST00000589091 FSTL1Q12841 308 aa19.15■□□□□ 0.66
DNMT1-217ENST00000589091 DPY19L2Q6NUT2 758 aa19.15■□□□□ 0.66
DNMT1-217ENST00000589091 GIGYF2Q6Y7W6 1299 aaKnown RBP19.15■□□□□ 0.66
DNMT1-217ENST00000589091 NEUROD2Q15784 382 aa19.14■□□□□ 0.65
DNMT1-217ENST00000589091 ERFEQ4G0M1 354 aa19.14■□□□□ 0.65
DNMT1-217ENST00000589091 CCDC93Q567U6 631 aa19.14■□□□□ 0.65
DNMT1-217ENST00000589091 ZBTB3Q9H5J0 574 aa19.14■□□□□ 0.65
DNMT1-217ENST00000589091 VEGFAP15692 232 aaPredicted RBP19.13■□□□□ 0.65
DNMT1-217ENST00000589091 EIF2S2P20042 333 aaKnown RBP19.13■□□□□ 0.65
DNMT1-217ENST00000589091 ADAMTS8Q9UP79 889 aa19.13■□□□□ 0.65
DNMT1-217ENST00000589091 ABCC12Q96J65 1359 aa19.12■□□□□ 0.65
DNMT1-217ENST00000589091 CHL1O00533 1208 aa19.12■□□□□ 0.65
DNMT1-217ENST00000589091 PARP10Q53GL7 1025 aa19.12■□□□□ 0.65
DNMT1-217ENST00000589091 PPP1R42Q7Z4L9 355 aa19.12■□□□□ 0.65
DNMT1-217ENST00000589091 ZNF34Q8IZ26 560 aa19.12■□□□□ 0.65
DNMT1-217ENST00000589091 C7orf43Q8WVR3 580 aa19.12■□□□□ 0.65
DNMT1-217ENST00000589091 UBN2Q6ZU65 1347 aa19.11■□□□□ 0.65
DNMT1-217ENST00000589091 GPTP24298 496 aa19.11■□□□□ 0.65
DNMT1-217ENST00000589091 PDIA6Q15084 440 aa19.11■□□□□ 0.65
DNMT1-217ENST00000589091 CRY2Q49AN0 593 aa19.11■□□□□ 0.65
DNMT1-217ENST00000589091 LRP10Q7Z4F1 713 aa19.11■□□□□ 0.65
DNMT1-217ENST00000589091 SMC1BQ8NDV3 1235 aa19.11■□□□□ 0.65
DNMT1-217ENST00000589091 TRIM35Q9UPQ4 493 aa19.11■□□□□ 0.65
DNMT1-217ENST00000589091 HOXB7P09629 217 aa19.1■□□□□ 0.65
DNMT1-217ENST00000589091 NUTM1Q86Y26 1132 aa19.1■□□□□ 0.65
DNMT1-217ENST00000589091 RTKN2Q8IZC4 609 aa19.1■□□□□ 0.65
DNMT1-217ENST00000589091 RNF123Q5XPI4 1314 aa19.09■□□□□ 0.65
DNMT1-217ENST00000589091 FKBP4Q02790 459 aaKnown RBP eCLIP19.09■□□□□ 0.65
DNMT1-217ENST00000589091 HSP90AB3PQ58FF7 597 aa19.09■□□□□ 0.65
DNMT1-217ENST00000589091 RPGRQ92834 1020 aaKnown RBP19.09■□□□□ 0.65
DNMT1-217ENST00000589091 LAS1LQ9Y4W2 734 aaKnown RBP19.09■□□□□ 0.65
DNMT1-217ENST00000589091 NTSR2O95665 410 aa19.08■□□□□ 0.64
DNMT1-217ENST00000589091 ZEB1P37275 1124 aaPredicted RBP19.08■□□□□ 0.64
DNMT1-217ENST00000589091 SUSD4Q5VX71 490 aa19.08■□□□□ 0.64
DNMT1-217ENST00000589091 DDX21Q9NR30 783 aaKnown RBP eCLIP19.08■□□□□ 0.64
DNMT1-217ENST00000589091 DDX60Q8IY21 1712 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms