RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 TXLNAP40222 546 aa7.34□□□□□ -1.23
SMAD4-207ENST00000589076 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.34□□□□□ -1.23
SMAD4-207ENST00000589076 RHPN1Q8TCX5 695 aa7.34□□□□□ -1.23
SMAD4-207ENST00000589076 ZNF358Q9NW07 568 aa7.34□□□□□ -1.23
SMAD4-207ENST00000589076 ADARB2-AS1A8MUL3 147 aa7.33□□□□□ -1.24
SMAD4-207ENST00000589076 M0R082 166 aa7.33□□□□□ -1.24
SMAD4-207ENST00000589076 TMEM132AQ24JP5 1023 aa7.33□□□□□ -1.24
SMAD4-207ENST00000589076 ZNF417Q8TAU3 575 aa7.33□□□□□ -1.24
SMAD4-207ENST00000589076 ZNF587Q96SQ5 575 aaPredicted RBP7.33□□□□□ -1.24
SMAD4-207ENST00000589076 STRN4Q9NRL3 753 aa7.33□□□□□ -1.24
SMAD4-207ENST00000589076 RBM19Q9Y4C8 960 aaKnown RBP7.33□□□□□ -1.24
SMAD4-207ENST00000589076 USP3Q9Y6I4 520 aa7.33□□□□□ -1.24
SMAD4-207ENST00000589076 ATP1A2P50993 1020 aa7.32□□□□□ -1.24
SMAD4-207ENST00000589076 NCOA4Q13772 614 aa7.32□□□□□ -1.24
SMAD4-207ENST00000589076 SLC9A9Q8IVB4 645 aa7.32□□□□□ -1.24
SMAD4-207ENST00000589076 PIK3CDO00329 1044 aa7.31□□□□□ -1.24
SMAD4-207ENST00000589076 EML1O00423 815 aa7.31□□□□□ -1.24
SMAD4-207ENST00000589076 RAD21O60216 631 aa7.31□□□□□ -1.24
SMAD4-207ENST00000589076 SPEM2Q0P670 501 aa7.31□□□□□ -1.24
SMAD4-207ENST00000589076 TNFRSF25Q93038 417 aa7.31□□□□□ -1.24
SMAD4-207ENST00000589076 PRDM6Q9NQX0 595 aa7.31□□□□□ -1.24
SMAD4-207ENST00000589076 HCN2Q9UL51 889 aa7.31□□□□□ -1.24
SMAD4-207ENST00000589076 MCM6Q14566 821 aa7.3□□□□□ -1.24
SMAD4-207ENST00000589076 C1orf53Q5VUE5 145 aa7.3□□□□□ -1.24
SMAD4-207ENST00000589076 CEP63Q96MT8 703 aa7.3□□□□□ -1.24
SMAD4-207ENST00000589076 USP17L5A8MUK1 530 aa7.29□□□□□ -1.24
SMAD4-207ENST00000589076 ADH7P40394 386 aa7.29□□□□□ -1.24
SMAD4-207ENST00000589076 PSMA6P60900 246 aaKnown RBP7.29□□□□□ -1.24
SMAD4-207ENST00000589076 HIF1AQ16665 826 aa7.29□□□□□ -1.24
SMAD4-207ENST00000589076 TNS4Q8IZW8 715 aa7.29□□□□□ -1.24
SMAD4-207ENST00000589076 ZDHHC1Q8WTX9 485 aa7.29□□□□□ -1.24
SMAD4-207ENST00000589076 BRD7Q9NPI1 651 aa7.29□□□□□ -1.24
SMAD4-207ENST00000589076 C9orf172C9J069 976 aa7.28□□□□□ -1.24
SMAD4-207ENST00000589076 LILRB5O75023 590 aa7.28□□□□□ -1.24
SMAD4-207ENST00000589076 SFSWAPQ12872 951 aaKnown RBP7.28□□□□□ -1.24
SMAD4-207ENST00000589076 TBCELQ5QJ74 424 aa7.28□□□□□ -1.24
SMAD4-207ENST00000589076 TRAPPC3LQ5T215 181 aa7.28□□□□□ -1.24
SMAD4-207ENST00000589076 MICALL1Q8N3F8 863 aa7.28□□□□□ -1.24
SMAD4-207ENST00000589076 TPCN2Q8NHX9 752 aa7.28□□□□□ -1.24
SMAD4-207ENST00000589076 ALG2Q9H553 416 aa7.28□□□□□ -1.24
SMAD4-207ENST00000589076 KCNH4Q9UQ05 1017 aa7.28□□□□□ -1.24
SMAD4-207ENST00000589076 RAC1P63000 192 aa7.27□□□□□ -1.25
SMAD4-207ENST00000589076 RSPO4Q2I0M5 234 aaPredicted RBP7.27□□□□□ -1.25
SMAD4-207ENST00000589076 DEPDC4Q8N2C3 294 aa7.27□□□□□ -1.25
SMAD4-207ENST00000589076 PSMG3-AS1Q96PY0 264 aa7.27□□□□□ -1.25
SMAD4-207ENST00000589076 SLC30A3Q99726 388 aa7.27□□□□□ -1.25
SMAD4-207ENST00000589076 TPSG1Q9NRR2 321 aa7.27□□□□□ -1.25
SMAD4-207ENST00000589076 COG6Q9Y2V7 657 aa7.27□□□□□ -1.25
SMAD4-207ENST00000589076 SFI1A8K8P3 1242 aa7.26□□□□□ -1.25
SMAD4-207ENST00000589076 FAM229AH3BQW9 127 aa7.26□□□□□ -1.25
SMAD4-207ENST00000589076 EPHA4P54764 986 aa7.26□□□□□ -1.25
SMAD4-207ENST00000589076 CCDC102BQ68D86 513 aa7.26□□□□□ -1.25
SMAD4-207ENST00000589076 MDFIQ99750 246 aa7.26□□□□□ -1.25
SMAD4-207ENST00000589076 EFCC1Q9HA90 598 aa7.26□□□□□ -1.25
SMAD4-207ENST00000589076 DYRK3O43781 588 aa7.25□□□□□ -1.25
SMAD4-207ENST00000589076 ALBP02768 609 aa7.25□□□□□ -1.25
SMAD4-207ENST00000589076 HIRAP54198 1017 aaPredicted RBP7.25□□□□□ -1.25
SMAD4-207ENST00000589076 KCNQ4P56696 695 aa7.25□□□□□ -1.25
SMAD4-207ENST00000589076 NRG1Q02297 640 aaPredicted RBP7.25□□□□□ -1.25
SMAD4-207ENST00000589076 TBC1D8BQ0IIM8 1120 aa7.25□□□□□ -1.25
SMAD4-207ENST00000589076 NKAPLQ5M9Q1 402 aa7.25□□□□□ -1.25
SMAD4-207ENST00000589076 NBPF11Q86T75 865 aa7.25□□□□□ -1.25
SMAD4-207ENST00000589076 UBE2OQ9C0C9 1292 aaKnown RBP7.25□□□□□ -1.25
SMAD4-207ENST00000589076 HCN4Q9Y3Q4 1203 aa7.25□□□□□ -1.25
SMAD4-207ENST00000589076 PALM3A6NDB9 673 aaPredicted RBP7.24□□□□□ -1.25
SMAD4-207ENST00000589076 ITGB7P26010 798 aa7.24□□□□□ -1.25
SMAD4-207ENST00000589076 RAB44Q7Z6P3 723 aaPredicted RBP7.24□□□□□ -1.25
SMAD4-207ENST00000589076 PLEKHM2Q8IWE5 1019 aa7.24□□□□□ -1.25
SMAD4-207ENST00000589076 BHMTQ93088 406 aa7.24□□□□□ -1.25
SMAD4-207ENST00000589076 PNMA5Q96PV4 448 aa7.24□□□□□ -1.25
SMAD4-207ENST00000589076 PHACTR1Q9C0D0 580 aa7.24□□□□□ -1.25
SMAD4-207ENST00000589076 IGFLR1Q9H665 355 aa7.24□□□□□ -1.25
SMAD4-207ENST00000589076 ZFP64Q9NPA5 681 aa7.24□□□□□ -1.25
SMAD4-207ENST00000589076 M0R2N6 131 aa7.23□□□□□ -1.25
SMAD4-207ENST00000589076 PPP1R12BO60237 982 aaPredicted RBP7.23□□□□□ -1.25
SMAD4-207ENST00000589076 ELNP15502 786 aa7.23□□□□□ -1.25
SMAD4-207ENST00000589076 GRIK4Q16099 956 aa7.23□□□□□ -1.25
SMAD4-207ENST00000589076 LARGE2Q8N3Y3 721 aa7.23□□□□□ -1.25
SMAD4-207ENST00000589076 HSH2DQ96JZ2 352 aa7.23□□□□□ -1.25
SMAD4-207ENST00000589076 SUSD3Q96L08 255 aa7.23□□□□□ -1.25
SMAD4-207ENST00000589076 TSPAN10Q9H1Z9 355 aaPredicted RBP7.23□□□□□ -1.25
SMAD4-207ENST00000589076 STARD13Q9Y3M8 1113 aa7.23□□□□□ -1.25
SMAD4-207ENST00000589076 GTF3C3Q9Y5Q9 886 aa7.23□□□□□ -1.25
SMAD4-207ENST00000589076 USP17L3A6NCW0 530 aa7.22□□□□□ -1.25
SMAD4-207ENST00000589076 USP17L4A6NCW7 530 aa7.22□□□□□ -1.25
SMAD4-207ENST00000589076 NID1P14543 1247 aa7.22□□□□□ -1.25
SMAD4-207ENST00000589076 USP17L2Q6R6M4 530 aa7.22□□□□□ -1.25
SMAD4-207ENST00000589076 C8orf86Q6ZUL3 223 aa7.22□□□□□ -1.25
SMAD4-207ENST00000589076 USP17L1Q7RTZ2 530 aa7.22□□□□□ -1.25
SMAD4-207ENST00000589076 C7orf43Q8WVR3 580 aa7.22□□□□□ -1.25
SMAD4-207ENST00000589076 KRTAP4-8Q9BYQ9 185 aa7.22□□□□□ -1.25
SMAD4-207ENST00000589076 JPH1Q9HDC5 661 aaPredicted RBP7.22□□□□□ -1.25
SMAD4-207ENST00000589076 H2AFB1P0C5Y9 115 aa7.21□□□□□ -1.26
SMAD4-207ENST00000589076 H2AFB2P0C5Z0 115 aa7.21□□□□□ -1.26
SMAD4-207ENST00000589076 TYRO3Q06418 890 aa7.21□□□□□ -1.26
SMAD4-207ENST00000589076 PCSK7Q16549 785 aa7.21□□□□□ -1.26
SMAD4-207ENST00000589076 PRSS36Q5K4E3 855 aa7.21□□□□□ -1.26
SMAD4-207ENST00000589076 ARTNQ5T4W7 220 aa7.21□□□□□ -1.26
SMAD4-207ENST00000589076 SH3PXD2AQ5TCZ1 1133 aa7.21□□□□□ -1.26
SMAD4-207ENST00000589076 OGFOD1Q8N543 542 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms