RNA–Protein interactions for RNA: ENST00000588905.5

GCDH-208, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-208ENST00000588905 FAM9BQ8IZU0 186 aa20.18■□□□□ 0.82
GCDH-208ENST00000588905 CFAP44Q96MT7 982 aa20.18■□□□□ 0.82
GCDH-208ENST00000588905 PIM2Q9P1W9 311 aa20.18■□□□□ 0.82
GCDH-208ENST00000588905 ERBB4Q15303 1308 aa20.18■□□□□ 0.82
GCDH-208ENST00000588905 ZNF853P0CG23 659 aa20.17■□□□□ 0.82
GCDH-208ENST00000588905 CHRNA5P30532 468 aa20.17■□□□□ 0.82
GCDH-208ENST00000588905 NGEFQ8N5V2 710 aa20.17■□□□□ 0.82
GCDH-208ENST00000588905 CARMIL3Q8ND23 1372 aa20.17■□□□□ 0.82
GCDH-208ENST00000588905 CACNA1SQ13698 1873 aa20.16■□□□□ 0.82
GCDH-208ENST00000588905 MYL6BP14649 208 aa20.16■□□□□ 0.82
GCDH-208ENST00000588905 EIF2S2P20042 333 aaKnown RBP20.16■□□□□ 0.82
GCDH-208ENST00000588905 TIAM2Q8IVF5 1701 aa20.16■□□□□ 0.82
GCDH-208ENST00000588905 CALD1Q05682 793 aaKnown RBP20.15■□□□□ 0.82
GCDH-208ENST00000588905 CCDC27Q2M243 656 aa20.15■□□□□ 0.82
GCDH-208ENST00000588905 KRT24Q2M2I5 525 aa20.15■□□□□ 0.82
GCDH-208ENST00000588905 DALRD3Q5D0E6 543 aaKnown RBP20.15■□□□□ 0.82
GCDH-208ENST00000588905 ERVV-1B6SEH8 477 aa20.14■□□□□ 0.81
GCDH-208ENST00000588905 PRR5LQ6MZQ0 368 aa20.14■□□□□ 0.81
GCDH-208ENST00000588905 ARHGAP27Q6ZUM4 889 aa20.14■□□□□ 0.81
GCDH-208ENST00000588905 MBIPQ9NS73 344 aa20.14■□□□□ 0.81
GCDH-208ENST00000588905 TNRC6CQ9HCJ0 1690 aaKnown RBP20.13■□□□□ 0.81
GCDH-208ENST00000588905 PDIA6Q15084 440 aa20.13■□□□□ 0.81
GCDH-208ENST00000588905 HLFQ16534 295 aa20.13■□□□□ 0.81
GCDH-208ENST00000588905 NCBP3Q53F19 620 aaKnown RBP20.13■□□□□ 0.81
GCDH-208ENST00000588905 KIF6Q6ZMV9 814 aa20.13■□□□□ 0.81
GCDH-208ENST00000588905 TTLL7Q6ZT98 887 aa20.13■□□□□ 0.81
GCDH-208ENST00000588905 WWC1Q8IX03 1113 aa20.13■□□□□ 0.81
GCDH-208ENST00000588905 CNBD1Q8NA66 436 aa20.13■□□□□ 0.81
GCDH-208ENST00000588905 BRIP1Q9BX63 1249 aa20.13■□□□□ 0.81
GCDH-208ENST00000588905 IFT57Q9NWB7 429 aa20.13■□□□□ 0.81
GCDH-208ENST00000588905 NIP7Q9Y221 180 aaKnown RBP eCLIP20.13■□□□□ 0.81
GCDH-208ENST00000588905 MAP3K15Q6ZN16 1313 aa20.12■□□□□ 0.81
GCDH-208ENST00000588905 H0YIN7 160 aa20.12■□□□□ 0.81
GCDH-208ENST00000588905 NPHP1O15259 732 aa20.12■□□□□ 0.81
GCDH-208ENST00000588905 GNAI1P63096 354 aa20.12■□□□□ 0.81
GCDH-208ENST00000588905 C2CD5Q86YS7 1000 aa20.12■□□□□ 0.81
GCDH-208ENST00000588905 PDZRN3Q9UPQ7 1066 aa20.12■□□□□ 0.81
GCDH-208ENST00000588905 LAMB4A4D0S4 1761 aa20.11■□□□□ 0.81
GCDH-208ENST00000588905 ARFGEF2Q9Y6D5 1785 aa20.11■□□□□ 0.81
GCDH-208ENST00000588905 HOXB7P09629 217 aa20.11■□□□□ 0.81
GCDH-208ENST00000588905 HSPA6P17066 643 aa20.11■□□□□ 0.81
GCDH-208ENST00000588905 PDE6BP35913 854 aa20.11■□□□□ 0.81
GCDH-208ENST00000588905 ST5P78524 1137 aa20.11■□□□□ 0.81
GCDH-208ENST00000588905 NBPF5PQ86XG9 351 aaPredicted RBP20.11■□□□□ 0.81
GCDH-208ENST00000588905 CCDC24Q8N4L8 307 aa20.11■□□□□ 0.81
GCDH-208ENST00000588905 NMRK2Q9NPI5 230 aa20.11■□□□□ 0.81
GCDH-208ENST00000588905 FER1L6Q2WGJ9 1857 aa20.11■□□□□ 0.81
GCDH-208ENST00000588905 C9orf131Q5VYM1 1079 aa20.1■□□□□ 0.81
GCDH-208ENST00000588905 LRP10Q7Z4F1 713 aa20.1■□□□□ 0.81
GCDH-208ENST00000588905 NECTIN2Q92692 538 aa20.1■□□□□ 0.81
GCDH-208ENST00000588905 SALL2Q9Y467 1007 aaPredicted RBP20.1■□□□□ 0.81
GCDH-208ENST00000588905 WDR90Q96KV7 1748 aa20.1■□□□□ 0.81
GCDH-208ENST00000588905 DICER1Q9UPY3 1922 aaKnown RBP20.1■□□□□ 0.81
GCDH-208ENST00000588905 CCER2I3L3R5 266 aa20.09■□□□□ 0.81
GCDH-208ENST00000588905 PRELPP51888 382 aa20.09■□□□□ 0.81
GCDH-208ENST00000588905 DIEXFQ68CQ4 756 aaKnown RBP20.09■□□□□ 0.81
GCDH-208ENST00000588905 TPTE2Q6XPS3 522 aa20.09■□□□□ 0.81
GCDH-208ENST00000588905 ANXA1P04083 346 aa20.08■□□□□ 0.81
GCDH-208ENST00000588905 PROSER3Q2NL68 480 aa20.08■□□□□ 0.81
GCDH-208ENST00000588905 DUSP27Q5VZP5 1158 aa20.08■□□□□ 0.81
GCDH-208ENST00000588905 TTLL6Q8N841 843 aa20.08■□□□□ 0.81
GCDH-208ENST00000588905 ZBTB3Q9H5J0 574 aa20.08■□□□□ 0.81
GCDH-208ENST00000588905 DDX21Q9NR30 783 aaKnown RBP eCLIP20.08■□□□□ 0.81
GCDH-208ENST00000588905 HDGFL1Q5TGJ6 251 aa20.07■□□□□ 0.8
GCDH-208ENST00000588905 FAM177BA6PVY3 158 aa20.06■□□□□ 0.8
GCDH-208ENST00000588905 GIGYF2Q6Y7W6 1299 aaKnown RBP20.06■□□□□ 0.8
GCDH-208ENST00000588905 ZNF622Q969S3 477 aaKnown RBP eCLIP20.06■□□□□ 0.8
GCDH-208ENST00000588905 SLX4Q8IY92 1834 aa20.06■□□□□ 0.8
GCDH-208ENST00000588905 RASSF7Q02833 373 aa20.05■□□□□ 0.8
GCDH-208ENST00000588905 COPS6Q7L5N1 327 aa20.05■□□□□ 0.8
GCDH-208ENST00000588905 C8orf58Q8NAV2 365 aa20.05■□□□□ 0.8
GCDH-208ENST00000588905 IL16Q14005 1332 aa20.04■□□□□ 0.8
GCDH-208ENST00000588905 ELL2O00472 640 aaPredicted RBP20.04■□□□□ 0.8
GCDH-208ENST00000588905 GTF2E1P29083 439 aaPredicted RBP20.04■□□□□ 0.8
GCDH-208ENST00000588905 AIMP1Q12904 312 aaKnown RBP20.04■□□□□ 0.8
GCDH-208ENST00000588905 WDR63Q8IWG1 891 aa20.04■□□□□ 0.8
GCDH-208ENST00000588905 MIER1Q8N108 512 aa20.04■□□□□ 0.8
GCDH-208ENST00000588905 XAGE3Q8WTP9 111 aa20.04■□□□□ 0.8
GCDH-208ENST00000588905 TSR2Q969E8 191 aaKnown RBP20.04■□□□□ 0.8
GCDH-208ENST00000588905 NYXQ9GZU5 481 aa20.04■□□□□ 0.8
GCDH-208ENST00000588905 RNF181Q9P0P0 153 aa20.04■□□□□ 0.8
GCDH-208ENST00000588905 CHPF2Q9P2E5 772 aa20.04■□□□□ 0.8
GCDH-208ENST00000588905 SRGNP10124 158 aa20.03■□□□□ 0.8
GCDH-208ENST00000588905 GPTP24298 496 aa20.03■□□□□ 0.8
GCDH-208ENST00000588905 STYK1Q6J9G0 422 aa20.03■□□□□ 0.8
GCDH-208ENST00000588905 ZNF34Q8IZ26 560 aa20.03■□□□□ 0.8
GCDH-208ENST00000588905 DBF4Q9UBU7 674 aaPredicted RBP20.03■□□□□ 0.8
GCDH-208ENST00000588905 KLRG2A4D1S0 409 aaPredicted RBP20.02■□□□□ 0.8
GCDH-208ENST00000588905 CNKSR1Q969H4 720 aa20.02■□□□□ 0.8
GCDH-208ENST00000588905 MASTLQ96GX5 879 aa20.02■□□□□ 0.8
GCDH-208ENST00000588905 TOMM70O94826 608 aa20.01■□□□□ 0.79
GCDH-208ENST00000588905 PARP10Q53GL7 1025 aa20.01■□□□□ 0.79
GCDH-208ENST00000588905 TSPYL6Q8N831 410 aa20.01■□□□□ 0.79
GCDH-208ENST00000588905 HYPKQ9NX55 129 aa20.01■□□□□ 0.79
GCDH-208ENST00000588905 UBN2Q6ZU65 1347 aa20.01■□□□□ 0.79
GCDH-208ENST00000588905 NFKBIEO00221 500 aa20■□□□□ 0.79
GCDH-208ENST00000588905 HSP90AB3PQ58FF7 597 aa20■□□□□ 0.79
GCDH-208ENST00000588905 SUSD4Q5VX71 490 aa20■□□□□ 0.79
GCDH-208ENST00000588905 CHMP4AQ9BY43 222 aa20■□□□□ 0.79
GCDH-208ENST00000588905 SPINK5Q9NQ38 1064 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms