RNA–Protein interactions for RNA: ENST00000588852.1

SAFB-205, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 2,842 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-205ENST00000588852 LIMCH1Q9UPQ0 1083 aa18.36■□□□□ 0.53
SAFB-205ENST00000588852 MAP3K2Q9Y2U5 619 aa18.36■□□□□ 0.53
SAFB-205ENST00000588852 CHMP3Q9Y3E7 222 aa18.36■□□□□ 0.53
SAFB-205ENST00000588852 DNM1Q05193 864 aaKnown RBP18.36■□□□□ 0.53
SAFB-205ENST00000588852 FAM173BQ6P4H8 233 aa18.36■□□□□ 0.53
SAFB-205ENST00000588852 GIMAP6Q6P9H5 292 aa18.36■□□□□ 0.53
SAFB-205ENST00000588852 AOX1Q06278 1338 aa18.35■□□□□ 0.53
SAFB-205ENST00000588852 TEFQ10587 303 aa18.35■□□□□ 0.53
SAFB-205ENST00000588852 AIMP1Q12904 312 aaKnown RBP18.35■□□□□ 0.53
SAFB-205ENST00000588852 KLHDC4Q8TBB5 520 aa18.35■□□□□ 0.53
SAFB-205ENST00000588852 FAM227BQ96M60 508 aa18.35■□□□□ 0.53
SAFB-205ENST00000588852 DIAPH3Q9NSV4 1193 aa18.35■□□□□ 0.53
SAFB-205ENST00000588852 HYPKQ9NX55 129 aa18.35■□□□□ 0.53
SAFB-205ENST00000588852 SMC3Q9UQE7 1217 aa18.35■□□□□ 0.53
SAFB-205ENST00000588852 UQCRHLA0A096LP55 91 aa18.35■□□□□ 0.53
SAFB-205ENST00000588852 UQCRHP07919 91 aa18.35■□□□□ 0.53
SAFB-205ENST00000588852 IL17RAQ96F46 866 aa18.35■□□□□ 0.53
SAFB-205ENST00000588852 TTC12Q9H892 705 aaPredicted RBP18.35■□□□□ 0.53
SAFB-205ENST00000588852 C9orf78Q9NZ63 289 aaPredicted RBP18.35■□□□□ 0.53
SAFB-205ENST00000588852 CCDC39Q9UFE4 941 aa18.35■□□□□ 0.53
SAFB-205ENST00000588852 TAF6LQ9Y6J9 622 aa18.35■□□□□ 0.53
SAFB-205ENST00000588852 GJB2P29033 226 aa18.34■□□□□ 0.53
SAFB-205ENST00000588852 ST3GAL1Q11201 340 aa18.34■□□□□ 0.53
SAFB-205ENST00000588852 ZNF530Q6P9A1 599 aaPredicted RBP18.34■□□□□ 0.53
SAFB-205ENST00000588852 SYAP1Q96A49 352 aaPredicted RBP18.34■□□□□ 0.53
SAFB-205ENST00000588852 CCDC8Q9H0W5 538 aaPredicted RBP18.34■□□□□ 0.53
SAFB-205ENST00000588852 SIL1Q9H173 461 aa18.34■□□□□ 0.53
SAFB-205ENST00000588852 CEMIPQ8WUJ3 1361 aa18.33■□□□□ 0.53
SAFB-205ENST00000588852 TLR7Q9NYK1 1049 aaKnown RBP18.33■□□□□ 0.53
SAFB-205ENST00000588852 F13A1P00488 732 aa18.33■□□□□ 0.52
SAFB-205ENST00000588852 FERMT3Q86UX7 667 aa18.33■□□□□ 0.52
SAFB-205ENST00000588852 VPS37CA5D8V6 355 aaPredicted RBP18.32■□□□□ 0.52
SAFB-205ENST00000588852 CLASRPQ8N2M8 674 aaKnown RBP18.32■□□□□ 0.52
SAFB-205ENST00000588852 TSC1Q92574 1164 aa18.32■□□□□ 0.52
SAFB-205ENST00000588852 ME3Q16798 604 aa18.32■□□□□ 0.52
SAFB-205ENST00000588852 LMOD2Q6P5Q4 547 aa18.32■□□□□ 0.52
SAFB-205ENST00000588852 AACSQ86V21 672 aa18.32■□□□□ 0.52
SAFB-205ENST00000588852 PDRG1Q9NUG6 133 aa18.32■□□□□ 0.52
SAFB-205ENST00000588852 IP6K1Q92551 441 aa18.31■□□□□ 0.52
SAFB-205ENST00000588852 GLRX3O76003 335 aaKnown RBP18.31■□□□□ 0.52
SAFB-205ENST00000588852 ADCY5O95622 1261 aa18.31■□□□□ 0.52
SAFB-205ENST00000588852 PHF8Q9UPP1 1060 aa18.31■□□□□ 0.52
SAFB-205ENST00000588852 AP5Z1O43299 807 aa18.31■□□□□ 0.52
SAFB-205ENST00000588852 IFIT2P09913 472 aaKnown RBP18.31■□□□□ 0.52
SAFB-205ENST00000588852 EDC3Q96F86 508 aaKnown RBP18.31■□□□□ 0.52
SAFB-205ENST00000588852 PXDNLA1KZ92 1463 aa18.3■□□□□ 0.52
SAFB-205ENST00000588852 MARF1Q9Y4F3 1742 aaKnown RBP18.3■□□□□ 0.52
SAFB-205ENST00000588852 CHGBP05060 677 aa18.3■□□□□ 0.52
SAFB-205ENST00000588852 ESCO1Q5FWF5 840 aa18.3■□□□□ 0.52
SAFB-205ENST00000588852 CCDC183Q5T5S1 534 aa18.3■□□□□ 0.52
SAFB-205ENST00000588852 KAZALD1Q96I82 304 aa18.3■□□□□ 0.52
SAFB-205ENST00000588852 ECHDC1Q9NTX5 307 aa18.3■□□□□ 0.52
SAFB-205ENST00000588852 MTMR6Q9Y217 621 aa18.3■□□□□ 0.52
SAFB-205ENST00000588852 NDUFB9Q9Y6M9 179 aa18.3■□□□□ 0.52
SAFB-205ENST00000588852 EAF2Q96CJ1 260 aaPredicted RBP18.3■□□□□ 0.52
SAFB-205ENST00000588852 SASH1O94885 1247 aa18.29■□□□□ 0.52
SAFB-205ENST00000588852 BOLA2Q9H3K6 86 aa18.29■□□□□ 0.52
SAFB-205ENST00000588852 BABAM1Q9NWV8 329 aa18.29■□□□□ 0.52
SAFB-205ENST00000588852 TPCN1Q9ULQ1 816 aa18.29■□□□□ 0.52
SAFB-205ENST00000588852 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.29■□□□□ 0.52
SAFB-205ENST00000588852 CACNA1FO60840 1977 aa18.29■□□□□ 0.52
SAFB-205ENST00000588852 FAM177BA6PVY3 158 aa18.29■□□□□ 0.52
SAFB-205ENST00000588852 PIP4K2AP48426 406 aaPredicted RBP18.29■□□□□ 0.52
SAFB-205ENST00000588852 SUCLG2Q96I99 432 aa18.29■□□□□ 0.52
SAFB-205ENST00000588852 KCNJ4P48050 445 aa18.28■□□□□ 0.52
SAFB-205ENST00000588852 UBE2HP62256 183 aa18.28■□□□□ 0.52
SAFB-205ENST00000588852 PSME1Q06323 249 aa18.28■□□□□ 0.52
SAFB-205ENST00000588852 THEMISQ8N1K5 641 aaPredicted RBP18.28■□□□□ 0.52
SAFB-205ENST00000588852 NMIQ13287 307 aaPredicted RBP18.28■□□□□ 0.52
SAFB-205ENST00000588852 DNTTIP2Q5QJE6 756 aaKnown RBP18.28■□□□□ 0.52
SAFB-205ENST00000588852 BICC1Q9H694 974 aaKnown RBP18.28■□□□□ 0.52
SAFB-205ENST00000588852 RBM8AQ9Y5S9 174 aaKnown RBP18.28■□□□□ 0.52
SAFB-205ENST00000588852 GIGYF1O75420 1035 aaPredicted RBP18.27■□□□□ 0.52
SAFB-205ENST00000588852 PHF14O94880 888 aa18.27■□□□□ 0.52
SAFB-205ENST00000588852 PDCL3Q9H2J4 239 aa18.27■□□□□ 0.52
SAFB-205ENST00000588852 DBF4Q9UBU7 674 aaPredicted RBP18.27■□□□□ 0.52
SAFB-205ENST00000588852 SLC39A6Q13433 755 aa18.27■□□□□ 0.52
SAFB-205ENST00000588852 NECTIN1Q15223 517 aa18.27■□□□□ 0.52
SAFB-205ENST00000588852 CAMK4Q16566 473 aa18.27■□□□□ 0.52
SAFB-205ENST00000588852 TMEM87AQ8NBN3 555 aa18.27■□□□□ 0.52
SAFB-205ENST00000588852 CYP46A1Q9Y6A2 500 aa18.27■□□□□ 0.52
SAFB-205ENST00000588852 A0A0D9SFI3 127 aa18.27■□□□□ 0.51
SAFB-205ENST00000588852 STK3Q13188 491 aa18.27■□□□□ 0.51
SAFB-205ENST00000588852 RGPD2P0DJD1 1756 aa18.27■□□□□ 0.51
SAFB-205ENST00000588852 TTC41PQ6P2S7 1318 aa18.26■□□□□ 0.51
SAFB-205ENST00000588852 ZSWIM6Q9HCJ5 1215 aa18.26■□□□□ 0.51
SAFB-205ENST00000588852 PXDNQ92626 1479 aa18.26■□□□□ 0.51
SAFB-205ENST00000588852 RNMTO43148 476 aaKnown RBP18.26■□□□□ 0.51
SAFB-205ENST00000588852 MYL6BP14649 208 aa18.26■□□□□ 0.51
SAFB-205ENST00000588852 KIAA2012Q0VF49 1180 aa18.26■□□□□ 0.51
SAFB-205ENST00000588852 CREB3L3Q68CJ9 461 aa18.26■□□□□ 0.51
SAFB-205ENST00000588852 CDC37L1Q7L3B6 337 aa18.26■□□□□ 0.51
SAFB-205ENST00000588852 HSP90AB4PQ58FF6 505 aa18.25■□□□□ 0.51
SAFB-205ENST00000588852 AKAP4Q5JQC9 854 aa18.25■□□□□ 0.51
SAFB-205ENST00000588852 KSR2Q6VAB6 950 aa18.25■□□□□ 0.51
SAFB-205ENST00000588852 CCDC171Q6TFL3 1326 aa18.25■□□□□ 0.51
SAFB-205ENST00000588852 VPS53Q5VIR6 699 aa18.25■□□□□ 0.51
SAFB-205ENST00000588852 SPC24Q8NBT2 197 aa18.25■□□□□ 0.51
SAFB-205ENST00000588852 TFIP11Q9UBB9 837 aaKnown RBP18.25■□□□□ 0.51
SAFB-205ENST00000588852 AXIN2Q9Y2T1 843 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms