RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 RGS3P49796 1198 aa14.27□□□□□ -0.12
SMAD4-205ENST00000588745 CWF19L2Q2TBE0 894 aaKnown RBP14.27□□□□□ -0.12
SMAD4-205ENST00000588745 MYD88Q99836 296 aa14.27□□□□□ -0.12
SMAD4-205ENST00000588745 LRRFIP2Q9Y608 721 aaKnown RBP14.27□□□□□ -0.12
SMAD4-205ENST00000588745 LOC102724428A0A0B4J2F2 783 aa14.26□□□□□ -0.13
SMAD4-205ENST00000588745 NEURL1BA8MQ27 555 aa14.26□□□□□ -0.13
SMAD4-205ENST00000588745 NBPF7P0C2Y1 421 aaPredicted RBP14.26□□□□□ -0.13
SMAD4-205ENST00000588745 SIK1P57059 783 aa14.26□□□□□ -0.13
SMAD4-205ENST00000588745 TTLL7Q6ZT98 887 aa14.26□□□□□ -0.13
SMAD4-205ENST00000588745 UTYO14607 1347 aa14.26□□□□□ -0.13
SMAD4-205ENST00000588745 NUCB1Q02818 461 aa14.25□□□□□ -0.13
SMAD4-205ENST00000588745 ZNF772Q68DY9 489 aaPredicted RBP14.25□□□□□ -0.13
SMAD4-205ENST00000588745 DCTPP1Q9H773 170 aa14.25□□□□□ -0.13
SMAD4-205ENST00000588745 C9orf78Q9NZ63 289 aaPredicted RBP14.25□□□□□ -0.13
SMAD4-205ENST00000588745 BRWD3Q6RI45 1802 aa14.25□□□□□ -0.13
SMAD4-205ENST00000588745 GRM8O00222 908 aa14.24□□□□□ -0.13
SMAD4-205ENST00000588745 ATP6V1AP38606 617 aa14.24□□□□□ -0.13
SMAD4-205ENST00000588745 HDAC5Q9UQL6 1122 aa14.24□□□□□ -0.13
SMAD4-205ENST00000588745 ZBTB1Q9Y2K1 713 aa14.24□□□□□ -0.13
SMAD4-205ENST00000588745 LY75O60449 1722 aa14.24□□□□□ -0.13
SMAD4-205ENST00000588745 ANKRD36CQ5JPF3 1778 aa14.23□□□□□ -0.13
SMAD4-205ENST00000588745 ATP8B2P98198 1209 aa14.23□□□□□ -0.13
SMAD4-205ENST00000588745 CHD1LQ86WJ1 897 aa14.23□□□□□ -0.13
SMAD4-205ENST00000588745 PNMA6EA0A0J9YXQ4 647 aa14.22□□□□□ -0.13
SMAD4-205ENST00000588745 IL6STP40189 918 aaPredicted RBP14.22□□□□□ -0.13
SMAD4-205ENST00000588745 ITPK1Q13572 414 aa14.22□□□□□ -0.13
SMAD4-205ENST00000588745 GCKRQ14397 625 aa14.22□□□□□ -0.13
SMAD4-205ENST00000588745 FAM182BQ5T319 152 aa14.22□□□□□ -0.13
SMAD4-205ENST00000588745 KIF6Q6ZMV9 814 aa14.22□□□□□ -0.13
SMAD4-205ENST00000588745 ZBTB3Q9H5J0 574 aa14.22□□□□□ -0.13
SMAD4-205ENST00000588745 ZNF330Q9Y3S2 320 aaPredicted RBP14.22□□□□□ -0.13
SMAD4-205ENST00000588745 PDE4AP27815 886 aa14.22□□□□□ -0.13
SMAD4-205ENST00000588745 RBM6P78332 1123 aaKnown RBP14.22□□□□□ -0.13
SMAD4-205ENST00000588745 MTX1Q13505 466 aa14.22□□□□□ -0.13
SMAD4-205ENST00000588745 CCDC87Q9NVE4 849 aa14.22□□□□□ -0.13
SMAD4-205ENST00000588745 ATP5J2-PTCD1G3V325 749 aa14.21□□□□□ -0.14
SMAD4-205ENST00000588745 CRKLP46109 303 aaKnown RBP14.21□□□□□ -0.14
SMAD4-205ENST00000588745 POLA2Q14181 598 aa14.21□□□□□ -0.14
SMAD4-205ENST00000588745 ANKRD45Q5TZF3 282 aa14.21□□□□□ -0.14
SMAD4-205ENST00000588745 INTS5Q6P9B9 1019 aaKnown RBP14.21□□□□□ -0.14
SMAD4-205ENST00000588745 PTF1AQ7RTS3 328 aa14.21□□□□□ -0.14
SMAD4-205ENST00000588745 SSH3Q8TE77 659 aa14.21□□□□□ -0.14
SMAD4-205ENST00000588745 FBXO41Q8TF61 875 aa14.21□□□□□ -0.14
SMAD4-205ENST00000588745 SUCLG2Q96I99 432 aa14.21□□□□□ -0.14
SMAD4-205ENST00000588745 LNPKQ9C0E8 428 aa14.21□□□□□ -0.14
SMAD4-205ENST00000588745 MYH14Q7Z406 1995 aaKnown RBP14.21□□□□□ -0.14
SMAD4-205ENST00000588745 MAP3K15Q6ZN16 1313 aa14.21□□□□□ -0.14
SMAD4-205ENST00000588745 COL15A1P39059 1388 aa14.2□□□□□ -0.14
SMAD4-205ENST00000588745 PPP1R42Q7Z4L9 355 aa14.2□□□□□ -0.14
SMAD4-205ENST00000588745 BCORQ6W2J9 1755 aa14.19□□□□□ -0.14
SMAD4-205ENST00000588745 SRGAP3O43295 1099 aa14.19□□□□□ -0.14
SMAD4-205ENST00000588745 EIF5P55010 431 aaKnown RBP14.19□□□□□ -0.14
SMAD4-205ENST00000588745 KRT27Q7Z3Y8 459 aa14.19□□□□□ -0.14
SMAD4-205ENST00000588745 NPM2Q86SE8 214 aaKnown RBP14.19□□□□□ -0.14
SMAD4-205ENST00000588745 ISCA1Q9BUE6 129 aa14.19□□□□□ -0.14
SMAD4-205ENST00000588745 CWC25Q9NXE8 425 aaPredicted RBP14.19□□□□□ -0.14
SMAD4-205ENST00000588745 NUP98P52948 1817 aa14.18□□□□□ -0.14
SMAD4-205ENST00000588745 TAF1LQ8IZX4 1826 aa14.18□□□□□ -0.14
SMAD4-205ENST00000588745 CNTNAP4Q9C0A0 1308 aa14.18□□□□□ -0.14
SMAD4-205ENST00000588745 TCIRG1Q13488 830 aa14.18□□□□□ -0.14
SMAD4-205ENST00000588745 HSP90AB3PQ58FF7 597 aa14.18□□□□□ -0.14
SMAD4-205ENST00000588745 GIGYF2Q6Y7W6 1299 aaKnown RBP14.18□□□□□ -0.14
SMAD4-205ENST00000588745 DZIP3Q86Y13 1208 aaKnown RBP14.18□□□□□ -0.14
SMAD4-205ENST00000588745 CCDC191Q8NCU4 936 aa14.18□□□□□ -0.14
SMAD4-205ENST00000588745 LINC00116Q8NCU8 138 aa14.18□□□□□ -0.14
SMAD4-205ENST00000588745 KAZALD1Q96I82 304 aa14.18□□□□□ -0.14
SMAD4-205ENST00000588745 ZBTB47Q9UFB7 747 aaPredicted RBP14.18□□□□□ -0.14
SMAD4-205ENST00000588745 A0A087WZG4 1122 aa14.17□□□□□ -0.14
SMAD4-205ENST00000588745 CASP7P55210 303 aa14.17□□□□□ -0.14
SMAD4-205ENST00000588745 TRIM28Q13263 835 aaKnown RBP14.17□□□□□ -0.14
SMAD4-205ENST00000588745 FAM196AQ6ZSG2 479 aa14.17□□□□□ -0.14
SMAD4-205ENST00000588745 UBE3BQ7Z3V4 1068 aa14.17□□□□□ -0.14
SMAD4-205ENST00000588745 BCL11BQ9C0K0 894 aaPredicted RBP14.17□□□□□ -0.14
SMAD4-205ENST00000588745 BICC1Q9H694 974 aaKnown RBP14.17□□□□□ -0.14
SMAD4-205ENST00000588745 EXOC6BQ9Y2D4 811 aa14.17□□□□□ -0.14
SMAD4-205ENST00000588745 SCN7AQ01118 1682 aa14.17□□□□□ -0.14
SMAD4-205ENST00000588745 ERVV-1B6SEH8 477 aa14.16□□□□□ -0.14
SMAD4-205ENST00000588745 H7C1W4 665 aa14.16□□□□□ -0.14
SMAD4-205ENST00000588745 FAM161AQ3B820 660 aa14.16□□□□□ -0.14
SMAD4-205ENST00000588745 ARXQ96QS3 562 aa14.16□□□□□ -0.14
SMAD4-205ENST00000588745 BACH2Q9BYV9 841 aa14.16□□□□□ -0.14
SMAD4-205ENST00000588745 HLFQ16534 295 aa14.15□□□□□ -0.14
SMAD4-205ENST00000588745 CCNL1Q9UK58 526 aaPredicted RBP14.15□□□□□ -0.14
SMAD4-205ENST00000588745 C4BP0C0L5 1744 aa14.15□□□□□ -0.14
SMAD4-205ENST00000588745 APBB1O00213 710 aa14.14□□□□□ -0.15
SMAD4-205ENST00000588745 RABL6Q3YEC7 729 aaPredicted RBP14.14□□□□□ -0.15
SMAD4-205ENST00000588745 C8orf34Q49A92 452 aa14.14□□□□□ -0.15
SMAD4-205ENST00000588745 EPHA10Q5JZY3 1008 aa14.14□□□□□ -0.15
SMAD4-205ENST00000588745 LRRCC1Q9C099 1032 aa14.14□□□□□ -0.15
SMAD4-205ENST00000588745 TBC1D2BQ9UPU7 963 aa14.14□□□□□ -0.15
SMAD4-205ENST00000588745 SMARCA5O60264 1052 aaPredicted RBP14.13□□□□□ -0.15
SMAD4-205ENST00000588745 RAB11FIP3O75154 756 aa14.13□□□□□ -0.15
SMAD4-205ENST00000588745 SURF6O75683 361 aaKnown RBP14.13□□□□□ -0.15
SMAD4-205ENST00000588745 HSP90AB4PQ58FF6 505 aa14.13□□□□□ -0.15
SMAD4-205ENST00000588745 RC3H1Q5TC82 1133 aaKnown RBP14.13□□□□□ -0.15
SMAD4-205ENST00000588745 JARID2Q92833 1246 aaPredicted RBP14.13□□□□□ -0.15
SMAD4-205ENST00000588745 NOP58Q9Y2X3 529 aaKnown RBP14.13□□□□□ -0.15
SMAD4-205ENST00000588745 RBM19Q9Y4C8 960 aaKnown RBP14.13□□□□□ -0.15
SMAD4-205ENST00000588745 CAMTA2O94983 1202 aa14.12□□□□□ -0.15
SMAD4-205ENST00000588745 PCCAP05165 728 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms