RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 TJP1Q07157 1748 aa13.26□□□□□ -0.29
NEDD4L-224ENST00000588712 CRKLP46109 303 aaKnown RBP13.26□□□□□ -0.29
NEDD4L-224ENST00000588712 HSP90AB3PQ58FF7 597 aa13.26□□□□□ -0.29
NEDD4L-224ENST00000588712 SLC27A3Q5K4L6 730 aa13.26□□□□□ -0.29
NEDD4L-224ENST00000588712 CCNL1Q9UK58 526 aaPredicted RBP13.26□□□□□ -0.29
NEDD4L-224ENST00000588712 PCDHB15Q9Y5E8 787 aa13.26□□□□□ -0.29
NEDD4L-224ENST00000588712 CNTNAP4Q9C0A0 1308 aa13.26□□□□□ -0.29
NEDD4L-224ENST00000588712 ERVV-1B6SEH8 477 aa13.25□□□□□ -0.29
NEDD4L-224ENST00000588712 UBTFL1P0CB47 393 aaPredicted RBP13.25□□□□□ -0.29
NEDD4L-224ENST00000588712 POTEAQ6S8J7 498 aa13.25□□□□□ -0.29
NEDD4L-224ENST00000588712 C9orf78Q9NZ63 289 aaPredicted RBP13.25□□□□□ -0.29
NEDD4L-224ENST00000588712 RGL2O15211 777 aa13.25□□□□□ -0.29
NEDD4L-224ENST00000588712 HMMRO75330 724 aa13.25□□□□□ -0.29
NEDD4L-224ENST00000588712 PIP4K2AP48426 406 aaPredicted RBP13.25□□□□□ -0.29
NEDD4L-224ENST00000588712 EIF5P55010 431 aaKnown RBP13.25□□□□□ -0.29
NEDD4L-224ENST00000588712 ITPK1Q13572 414 aa13.25□□□□□ -0.29
NEDD4L-224ENST00000588712 USP44Q9H0E7 712 aa13.25□□□□□ -0.29
NEDD4L-224ENST00000588712 INTS5Q6P9B9 1019 aaKnown RBP13.24□□□□□ -0.29
NEDD4L-224ENST00000588712 ZBTB1Q9Y2K1 713 aa13.24□□□□□ -0.29
NEDD4L-224ENST00000588712 MAP3K15Q6ZN16 1313 aa13.24□□□□□ -0.29
NEDD4L-224ENST00000588712 TRIM37O94972 964 aa13.24□□□□□ -0.29
NEDD4L-224ENST00000588712 MEIS3Q99687 375 aa13.24□□□□□ -0.29
NEDD4L-224ENST00000588712 MYD88Q99836 296 aa13.24□□□□□ -0.29
NEDD4L-224ENST00000588712 ZNF330Q9Y3S2 320 aaPredicted RBP13.24□□□□□ -0.29
NEDD4L-224ENST00000588712 KDM2BQ8NHM5 1336 aa13.23□□□□□ -0.29
NEDD4L-224ENST00000588712 PLSCR1O15162 318 aa13.23□□□□□ -0.29
NEDD4L-224ENST00000588712 TRIM28Q13263 835 aaKnown RBP13.23□□□□□ -0.29
NEDD4L-224ENST00000588712 PTF1AQ7RTS3 328 aa13.23□□□□□ -0.29
NEDD4L-224ENST00000588712 CCDC191Q8NCU4 936 aa13.23□□□□□ -0.29
NEDD4L-224ENST00000588712 UTYO14607 1347 aa13.23□□□□□ -0.29
NEDD4L-224ENST00000588712 LY75O60449 1722 aa13.23□□□□□ -0.29
NEDD4L-224ENST00000588712 NEURL1BA8MQ27 555 aa13.22□□□□□ -0.29
NEDD4L-224ENST00000588712 TCIRG1Q13488 830 aa13.22□□□□□ -0.29
NEDD4L-224ENST00000588712 GCKRQ14397 625 aa13.22□□□□□ -0.29
NEDD4L-224ENST00000588712 GIGYF2Q6Y7W6 1299 aaKnown RBP13.22□□□□□ -0.29
NEDD4L-224ENST00000588712 TTLL7Q6ZT98 887 aa13.22□□□□□ -0.29
NEDD4L-224ENST00000588712 DZIP3Q86Y13 1208 aaKnown RBP13.22□□□□□ -0.29
NEDD4L-224ENST00000588712 ANKRD44Q8N8A2 993 aa13.22□□□□□ -0.29
NEDD4L-224ENST00000588712 GCC1Q96CN9 775 aa13.22□□□□□ -0.29
NEDD4L-224ENST00000588712 RREB1Q92766 1687 aa13.22□□□□□ -0.29
NEDD4L-224ENST00000588712 GRM8O00222 908 aa13.22□□□□□ -0.29
NEDD4L-224ENST00000588712 ARXQ96QS3 562 aa13.22□□□□□ -0.29
NEDD4L-224ENST00000588712 COL5A3P25940 1745 aaPredicted RBP13.22□□□□□ -0.29
NEDD4L-224ENST00000588712 RPS6KA4O75676 772 aa13.21□□□□□ -0.29
NEDD4L-224ENST00000588712 IGHDP01880 384 aa13.21□□□□□ -0.29
NEDD4L-224ENST00000588712 IGKV5-2P06315 115 aa13.21□□□□□ -0.29
NEDD4L-224ENST00000588712 LINC00116Q8NCU8 138 aa13.21□□□□□ -0.29
NEDD4L-224ENST00000588712 ZBTB3Q9H5J0 574 aa13.21□□□□□ -0.29
NEDD4L-224ENST00000588712 CWC25Q9NXE8 425 aaPredicted RBP13.21□□□□□ -0.29
NEDD4L-224ENST00000588712 ZNF652Q9Y2D9 606 aa13.21□□□□□ -0.29
NEDD4L-224ENST00000588712 ARFGEF2Q9Y6D5 1785 aa13.21□□□□□ -0.3
NEDD4L-224ENST00000588712 CWF19L2Q2TBE0 894 aaKnown RBP13.2□□□□□ -0.3
NEDD4L-224ENST00000588712 ATP8B2P98198 1209 aa13.2□□□□□ -0.3
NEDD4L-224ENST00000588712 CEP85Q6P2H3 762 aa13.2□□□□□ -0.3
NEDD4L-224ENST00000588712 CLEC4GQ6UXB4 293 aa13.2□□□□□ -0.3
NEDD4L-224ENST00000588712 RTCBQ9Y3I0 505 aaKnown RBP13.2□□□□□ -0.3
NEDD4L-224ENST00000588712 ISCA1Q9BUE6 129 aa13.19□□□□□ -0.3
NEDD4L-224ENST00000588712 C1orf115Q9H7X2 142 aa13.19□□□□□ -0.3
NEDD4L-224ENST00000588712 NUP188Q5SRE5 1749 aa13.19□□□□□ -0.3
NEDD4L-224ENST00000588712 APBA3O96018 575 aa13.19□□□□□ -0.3
NEDD4L-224ENST00000588712 NBPF7P0C2Y1 421 aaPredicted RBP13.19□□□□□ -0.3
NEDD4L-224ENST00000588712 ADRA2BP18089 450 aa13.19□□□□□ -0.3
NEDD4L-224ENST00000588712 SMC5Q8IY18 1101 aa13.19□□□□□ -0.3
NEDD4L-224ENST00000588712 COL15A1P39059 1388 aa13.18□□□□□ -0.3
NEDD4L-224ENST00000588712 AK7Q96M32 723 aa13.18□□□□□ -0.3
NEDD4L-224ENST00000588712 TBC1D2BQ9UPU7 963 aa13.18□□□□□ -0.3
NEDD4L-224ENST00000588712 LRRFIP2Q9Y608 721 aaKnown RBP13.18□□□□□ -0.3
NEDD4L-224ENST00000588712 ATP5J2-PTCD1G3V325 749 aa13.17□□□□□ -0.3
NEDD4L-224ENST00000588712 H7C1W4 665 aa13.17□□□□□ -0.3
NEDD4L-224ENST00000588712 HSP90B1P14625 803 aaKnown RBP13.17□□□□□ -0.3
NEDD4L-224ENST00000588712 ZBTB47Q9UFB7 747 aaPredicted RBP13.17□□□□□ -0.3
NEDD4L-224ENST00000588712 MYH14Q7Z406 1995 aaKnown RBP13.17□□□□□ -0.3
NEDD4L-224ENST00000588712 MTX1Q13505 466 aa13.17□□□□□ -0.3
NEDD4L-224ENST00000588712 TXNRD1Q16881 649 aa13.17□□□□□ -0.3
NEDD4L-224ENST00000588712 PARP10Q53GL7 1025 aa13.17□□□□□ -0.3
NEDD4L-224ENST00000588712 TRAPPC3LQ5T215 181 aa13.17□□□□□ -0.3
NEDD4L-224ENST00000588712 DCTPP1Q9H773 170 aa13.17□□□□□ -0.3
NEDD4L-224ENST00000588712 GNPATO15228 680 aa13.16□□□□□ -0.3
NEDD4L-224ENST00000588712 ZPR1O75312 459 aa13.16□□□□□ -0.3
NEDD4L-224ENST00000588712 ILDR1Q86SU0 546 aaPredicted RBP13.16□□□□□ -0.3
NEDD4L-224ENST00000588712 SIRT2Q8IXJ6 389 aa13.16□□□□□ -0.3
NEDD4L-224ENST00000588712 TAF1LQ8IZX4 1826 aa13.16□□□□□ -0.3
NEDD4L-224ENST00000588712 SF3B2Q13435 895 aaKnown RBP13.16□□□□□ -0.3
NEDD4L-224ENST00000588712 HSP90AB4PQ58FF6 505 aa13.16□□□□□ -0.3
NEDD4L-224ENST00000588712 ZBTB38Q8NAP3 1195 aaPredicted RBP13.16□□□□□ -0.3
NEDD4L-224ENST00000588712 NARFQ9UHQ1 456 aa13.16□□□□□ -0.3
NEDD4L-224ENST00000588712 AFDNP55196 1824 aaKnown RBP13.15□□□□□ -0.3
NEDD4L-224ENST00000588712 CAMTA2O94983 1202 aa13.15□□□□□ -0.3
NEDD4L-224ENST00000588712 PCCAP05165 728 aaPredicted RBP13.15□□□□□ -0.3
NEDD4L-224ENST00000588712 ZNF34Q8IZ26 560 aa13.15□□□□□ -0.3
NEDD4L-224ENST00000588712 SSH3Q8TE77 659 aa13.15□□□□□ -0.3
NEDD4L-224ENST00000588712 C4BP0C0L5 1744 aa13.15□□□□□ -0.3
NEDD4L-224ENST00000588712 KCNQ4P56696 695 aa13.14□□□□□ -0.31
NEDD4L-224ENST00000588712 HLFQ16534 295 aa13.14□□□□□ -0.31
NEDD4L-224ENST00000588712 UBE3BQ7Z3V4 1068 aa13.14□□□□□ -0.31
NEDD4L-224ENST00000588712 PPP1R42Q7Z4L9 355 aa13.14□□□□□ -0.31
NEDD4L-224ENST00000588712 CCDC125Q86Z20 511 aa13.14□□□□□ -0.31
NEDD4L-224ENST00000588712 LRRC4BQ9NT99 713 aa13.14□□□□□ -0.31
NEDD4L-224ENST00000588712 RGPD3A6NKT7 1758 aaPredicted RBP13.14□□□□□ -0.31
NEDD4L-224ENST00000588712 RGPD4Q7Z3J3 1758 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms