RNA–Protein interactions for RNA: ENST00000588087.5

TMC6-209, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 2,384 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-209ENST00000588087 NCAPD2Q15021 1401 aa26.02■■□□□ 1.76
TMC6-209ENST00000588087 EPB41L2O43491 1005 aaKnown RBP26.02■■□□□ 1.76
TMC6-209ENST00000588087 AACSQ86V21 672 aa26.02■■□□□ 1.76
TMC6-209ENST00000588087 TTC14Q96N46 770 aa26.02■■□□□ 1.76
TMC6-209ENST00000588087 HEG1Q9ULI3 1381 aa26.02■■□□□ 1.76
TMC6-209ENST00000588087 IFIT2P09913 472 aaKnown RBP26.01■■□□□ 1.75
TMC6-209ENST00000588087 PTH1RQ03431 593 aa26.01■■□□□ 1.75
TMC6-209ENST00000588087 KRT28Q7Z3Y7 464 aa26.01■■□□□ 1.75
TMC6-209ENST00000588087 ECHDC1Q9NTX5 307 aa26.01■■□□□ 1.75
TMC6-209ENST00000588087 RUFY3Q7L099 469 aa26■■□□□ 1.75
TMC6-209ENST00000588087 KAZALD1Q96I82 304 aa26■■□□□ 1.75
TMC6-209ENST00000588087 RPAP1Q9BWH6 1393 aaPredicted RBP26■■□□□ 1.75
TMC6-209ENST00000588087 BICC1Q9H694 974 aaKnown RBP26■■□□□ 1.75
TMC6-209ENST00000588087 SLIT3O75094 1523 aa26■■□□□ 1.75
TMC6-209ENST00000588087 GADD45BO75293 160 aaPredicted RBP25.99■■□□□ 1.75
TMC6-209ENST00000588087 MBD3O95983 291 aa25.99■■□□□ 1.75
TMC6-209ENST00000588087 PHRF1Q9P1Y6 1649 aaKnown RBP25.99■■□□□ 1.75
TMC6-209ENST00000588087 GRM8O00222 908 aa25.99■■□□□ 1.75
TMC6-209ENST00000588087 LRSAM1Q6UWE0 723 aa25.99■■□□□ 1.75
TMC6-209ENST00000588087 DDX54Q8TDD1 881 aaKnown RBP25.99■■□□□ 1.75
TMC6-209ENST00000588087 HYPKQ9NX55 129 aa25.99■■□□□ 1.75
TMC6-209ENST00000588087 NPHP4O75161 1426 aaPredicted RBP25.99■■□□□ 1.75
TMC6-209ENST00000588087 CASTP20810 708 aaKnown RBP25.98■■□□□ 1.75
TMC6-209ENST00000588087 PDIA6Q15084 440 aa25.98■■□□□ 1.75
TMC6-209ENST00000588087 TPRNQ4KMQ1 711 aa25.98■■□□□ 1.75
TMC6-209ENST00000588087 WDR33Q9C0J8 1336 aaKnown RBP25.97■■□□□ 1.75
TMC6-209ENST00000588087 MYL6BP14649 208 aa25.97■■□□□ 1.75
TMC6-209ENST00000588087 PRPF40BQ6NWY9 871 aaKnown RBP25.97■■□□□ 1.75
TMC6-209ENST00000588087 RNF214Q8ND24 703 aa25.97■■□□□ 1.75
TMC6-209ENST00000588087 LINS1Q8NG48 757 aa25.97■■□□□ 1.75
TMC6-209ENST00000588087 SIL1Q9H173 461 aa25.97■■□□□ 1.75
TMC6-209ENST00000588087 LARGE1O95461 756 aa25.97■■□□□ 1.75
TMC6-209ENST00000588087 CCDC8Q9H0W5 538 aaPredicted RBP25.97■■□□□ 1.75
TMC6-209ENST00000588087 TLR7Q9NYK1 1049 aaKnown RBP25.97■■□□□ 1.75
TMC6-209ENST00000588087 SASH1O94885 1247 aa25.96■■□□□ 1.75
TMC6-209ENST00000588087 ADCK5Q3MIX3 580 aa25.96■■□□□ 1.75
TMC6-209ENST00000588087 KLHDC4Q8TBB5 520 aa25.96■■□□□ 1.75
TMC6-209ENST00000588087 DDX21Q9NR30 783 aaKnown RBP eCLIP25.96■■□□□ 1.75
TMC6-209ENST00000588087 OVOS2A0A0G2JMS6 1433 aa25.96■■□□□ 1.75
TMC6-209ENST00000588087 GPATCH3Q96I76 525 aa25.96■■□□□ 1.75
TMC6-209ENST00000588087 USP48Q86UV5 1035 aa25.95■■□□□ 1.74
TMC6-209ENST00000588087 ERC1Q8IUD2 1116 aa25.95■■□□□ 1.74
TMC6-209ENST00000588087 EAF2Q96CJ1 260 aaPredicted RBP25.95■■□□□ 1.74
TMC6-209ENST00000588087 LIMCH1Q9UPQ0 1083 aa25.95■■□□□ 1.74
TMC6-209ENST00000588087 ERBB3P21860 1342 aa25.95■■□□□ 1.74
TMC6-209ENST00000588087 IGKV5-2P06315 115 aa25.95■■□□□ 1.74
TMC6-209ENST00000588087 JAKMIP1Q96N16 626 aaKnown RBP25.95■■□□□ 1.74
TMC6-209ENST00000588087 RIC3Q7Z5B4 369 aa25.94■■□□□ 1.74
TMC6-209ENST00000588087 PROSER2Q86WR7 435 aaPredicted RBP25.94■■□□□ 1.74
TMC6-209ENST00000588087 DDX17Q92841 729 aaKnown RBP25.94■■□□□ 1.74
TMC6-209ENST00000588087 NLRP2Q9NX02 1062 aa25.94■■□□□ 1.74
TMC6-209ENST00000588087 DDX58O95786 925 aaKnown RBP25.93■■□□□ 1.74
TMC6-209ENST00000588087 PIP4K2AP48426 406 aaPredicted RBP25.93■■□□□ 1.74
TMC6-209ENST00000588087 RUFY2Q8WXA3 655 aa25.93■■□□□ 1.74
TMC6-209ENST00000588087 FAM227BQ96M60 508 aa25.93■■□□□ 1.74
TMC6-209ENST00000588087 G3BP1Q13283 466 aaKnown RBP eCLIP25.92■■□□□ 1.74
TMC6-209ENST00000588087 ZNF790Q6PG37 636 aa25.92■■□□□ 1.74
TMC6-209ENST00000588087 ZSCAN30Q86W11 494 aa25.92■■□□□ 1.74
TMC6-209ENST00000588087 JARID2Q92833 1246 aaPredicted RBP25.92■■□□□ 1.74
TMC6-209ENST00000588087 CNPY2Q9Y2B0 182 aa25.92■■□□□ 1.74
TMC6-209ENST00000588087 CRYBG1Q9Y4K1 1723 aa25.91■■□□□ 1.74
TMC6-209ENST00000588087 CCDC83Q8IWF9 413 aa25.91■■□□□ 1.74
TMC6-209ENST00000588087 RAPGEF4Q8WZA2 1011 aa25.91■■□□□ 1.74
TMC6-209ENST00000588087 EVI5LQ96CN4 794 aa25.91■■□□□ 1.74
TMC6-209ENST00000588087 ZNF142P52746 1687 aaPredicted RBP25.91■■□□□ 1.74
TMC6-209ENST00000588087 NFATC2IPQ8NCF5 419 aa25.91■■□□□ 1.74
TMC6-209ENST00000588087 XAGE3Q8WTP9 111 aa25.91■■□□□ 1.74
TMC6-209ENST00000588087 ADAMTSL3P82987 1691 aa25.91■■□□□ 1.74
TMC6-209ENST00000588087 SYT1P21579 422 aa25.9■■□□□ 1.74
TMC6-209ENST00000588087 PDRG1Q9NUG6 133 aa25.9■■□□□ 1.74
TMC6-209ENST00000588087 SMC3Q9UQE7 1217 aa25.9■■□□□ 1.74
TMC6-209ENST00000588087 NMIQ13287 307 aaPredicted RBP25.9■■□□□ 1.74
TMC6-209ENST00000588087 COL9A3Q14050 684 aaPredicted RBP25.9■■□□□ 1.74
TMC6-209ENST00000588087 EPHA10Q5JZY3 1008 aa25.9■■□□□ 1.74
TMC6-209ENST00000588087 BOLA2Q9H3K6 86 aa25.9■■□□□ 1.74
TMC6-209ENST00000588087 UTYO14607 1347 aa25.9■■□□□ 1.74
TMC6-209ENST00000588087 KDM6AO15550 1401 aaPredicted RBP25.89■■□□□ 1.74
TMC6-209ENST00000588087 ZSCAN22P10073 491 aaPredicted RBP25.89■■□□□ 1.74
TMC6-209ENST00000588087 PDLIM2Q96JY6 352 aa25.89■■□□□ 1.74
TMC6-209ENST00000588087 HDAC5Q9UQL6 1122 aa25.89■■□□□ 1.74
TMC6-209ENST00000588087 MYD88Q99836 296 aa25.89■■□□□ 1.73
TMC6-209ENST00000588087 SLC52A2Q9HAB3 445 aa25.89■■□□□ 1.73
TMC6-209ENST00000588087 CCDC171Q6TFL3 1326 aa25.89■■□□□ 1.73
TMC6-209ENST00000588087 STX6O43752 255 aa25.88■■□□□ 1.73
TMC6-209ENST00000588087 COPS6Q7L5N1 327 aa25.88■■□□□ 1.73
TMC6-209ENST00000588087 NPHP3Q7Z494 1330 aa25.88■■□□□ 1.73
TMC6-209ENST00000588087 NEURL1BA8MQ27 555 aa25.88■■□□□ 1.73
TMC6-209ENST00000588087 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.88■■□□□ 1.73
TMC6-209ENST00000588087 RBM8AQ9Y5S9 174 aaKnown RBP25.88■■□□□ 1.73
TMC6-209ENST00000588087 C1orf167Q5SNV9 1468 aa25.88■■□□□ 1.73
TMC6-209ENST00000588087 ZNF496Q96IT1 587 aaPredicted RBP25.87■■□□□ 1.73
TMC6-209ENST00000588087 KCNJ4P48050 445 aa25.87■■□□□ 1.73
TMC6-209ENST00000588087 PHKG2P15735 406 aa25.86■■□□□ 1.73
TMC6-209ENST00000588087 LARP1Q6PKG0 1096 aaKnown RBP25.86■■□□□ 1.73
TMC6-209ENST00000588087 CABLES1Q8TDN4 633 aa25.86■■□□□ 1.73
TMC6-209ENST00000588087 TSPY26PQ9H489 355 aa25.86■■□□□ 1.73
TMC6-209ENST00000588087 A0A0D9SFI3 127 aa25.85■■□□□ 1.73
TMC6-209ENST00000588087 MSNP26038 577 aaKnown RBP25.85■■□□□ 1.73
TMC6-209ENST00000588087 NECTIN1Q15223 517 aa25.85■■□□□ 1.73
TMC6-209ENST00000588087 SYAP1Q96A49 352 aaPredicted RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 181.4 ms