RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 RGL2O15211 777 aa23.15■■□□□ 1.3
TPM4-206ENST00000587201 EIF2S2P20042 333 aaKnown RBP23.15■■□□□ 1.3
TPM4-206ENST00000587201 NIP7Q9Y221 180 aaKnown RBP eCLIP23.15■■□□□ 1.3
TPM4-206ENST00000587201 HLFQ16534 295 aa23.14■■□□□ 1.29
TPM4-206ENST00000587201 NBPF5PQ86XG9 351 aaPredicted RBP23.14■■□□□ 1.29
TPM4-206ENST00000587201 TTLL6Q8N841 843 aa23.14■■□□□ 1.29
TPM4-206ENST00000587201 PDZRN3Q9UPQ7 1066 aa23.14■■□□□ 1.29
TPM4-206ENST00000587201 ERBB4Q15303 1308 aa23.13■■□□□ 1.29
TPM4-206ENST00000587201 CHL1O00533 1208 aa23.13■■□□□ 1.29
TPM4-206ENST00000587201 KIF6Q6ZMV9 814 aa23.13■■□□□ 1.29
TPM4-206ENST00000587201 ZNF526Q8TF50 670 aaPredicted RBP23.13■■□□□ 1.29
TPM4-206ENST00000587201 ZNF622Q969S3 477 aaKnown RBP eCLIP23.13■■□□□ 1.294e-10■■■□□ 14.6
TPM4-206ENST00000587201 APAF1O14727 1248 aa23.12■■□□□ 1.29
TPM4-206ENST00000587201 TTLL7Q6ZT98 887 aa23.12■■□□□ 1.29
TPM4-206ENST00000587201 GPBP1L1Q9HC44 474 aaPredicted RBP23.12■■□□□ 1.29
TPM4-206ENST00000587201 MAP3K15Q6ZN16 1313 aa23.11■■□□□ 1.29
TPM4-206ENST00000587201 ERVV-1B6SEH8 477 aa23.11■■□□□ 1.29
TPM4-206ENST00000587201 CCDC184Q52MB2 194 aa23.11■■□□□ 1.29
TPM4-206ENST00000587201 DLEC1Q9Y238 1755 aa23.11■■□□□ 1.29
TPM4-206ENST00000587201 ANKRD31Q8N7Z5 1873 aa23.11■■□□□ 1.29
TPM4-206ENST00000587201 FAM177BA6PVY3 158 aa23.1■■□□□ 1.29
TPM4-206ENST00000587201 ANP32CO43423 234 aa23.1■■□□□ 1.29
TPM4-206ENST00000587201 TPTE2Q6XPS3 522 aa23.1■■□□□ 1.29
TPM4-206ENST00000587201 C9orf131Q5VYM1 1079 aa23.09■■□□□ 1.29
TPM4-206ENST00000587201 NECTIN2Q92692 538 aa23.09■■□□□ 1.29
TPM4-206ENST00000587201 ZBTB3Q9H5J0 574 aa23.09■■□□□ 1.29
TPM4-206ENST00000587201 C1QTNF8P60827 252 aa23.08■■□□□ 1.29
TPM4-206ENST00000587201 PDIA6Q15084 440 aa23.08■■□□□ 1.29
TPM4-206ENST00000587201 GTF2E1P29083 439 aaPredicted RBP23.07■■□□□ 1.28
TPM4-206ENST00000587201 KRT24Q2M2I5 525 aa23.07■■□□□ 1.28
TPM4-206ENST00000587201 CFAP44Q96MT7 982 aa23.07■■□□□ 1.28
TPM4-206ENST00000587201 ANXA1P04083 346 aa23.06■■□□□ 1.28
TPM4-206ENST00000587201 RNF181Q9P0P0 153 aa23.06■■□□□ 1.28
TPM4-206ENST00000587201 COL11A2P13942 1736 aaPredicted RBP23.05■■□□□ 1.28
TPM4-206ENST00000587201 SRGNP10124 158 aa23.05■■□□□ 1.28
TPM4-206ENST00000587201 RASSF7Q02833 373 aa23.05■■□□□ 1.28
TPM4-206ENST00000587201 PROSER3Q2NL68 480 aa23.05■■□□□ 1.28
TPM4-206ENST00000587201 STYK1Q6J9G0 422 aa23.05■■□□□ 1.28
TPM4-206ENST00000587201 MASTLQ96GX5 879 aa23.05■■□□□ 1.28
TPM4-206ENST00000587201 ZNF219Q9P2Y4 722 aaPredicted RBP23.05■■□□□ 1.28
TPM4-206ENST00000587201 GPTP24298 496 aa23.04■■□□□ 1.28
TPM4-206ENST00000587201 CALD1Q05682 793 aaKnown RBP23.04■■□□□ 1.28
TPM4-206ENST00000587201 GIGYF2Q6Y7W6 1299 aaKnown RBP23.04■■□□□ 1.28
TPM4-206ENST00000587201 LRP10Q7Z4F1 713 aa23.04■■□□□ 1.28
TPM4-206ENST00000587201 CNKSR1Q969H4 720 aa23.04■■□□□ 1.28
TPM4-206ENST00000587201 NYXQ9GZU5 481 aa23.04■■□□□ 1.28
TPM4-206ENST00000587201 MRS2Q9HD23 443 aa23.04■■□□□ 1.28
TPM4-206ENST00000587201 C21orf2O43822 256 aa23.03■■□□□ 1.28
TPM4-206ENST00000587201 MBIPQ9NS73 344 aa23.03■■□□□ 1.28
TPM4-206ENST00000587201 NUP98P52948 1817 aa23.03■■□□□ 1.28
TPM4-206ENST00000587201 AIMP1Q12904 312 aaKnown RBP23.02■■□□□ 1.28
TPM4-206ENST00000587201 HDGFL1Q5TGJ6 251 aa23.02■■□□□ 1.28
TPM4-206ENST00000587201 HOXB7P09629 217 aa23.01■■□□□ 1.27
TPM4-206ENST00000587201 ZNF853P0CG23 659 aa23.01■■□□□ 1.27
TPM4-206ENST00000587201 GNAI1P63096 354 aa23.01■■□□□ 1.27
TPM4-206ENST00000587201 COPS6Q7L5N1 327 aa23.01■■□□□ 1.27
TPM4-206ENST00000587201 NUTM1Q86Y26 1132 aa23.01■■□□□ 1.27
TPM4-206ENST00000587201 DDX21Q9NR30 783 aaKnown RBP eCLIP23.01■■□□□ 1.274e-7■■□□□ 12.4
TPM4-206ENST00000587201 IFT57Q9NWB7 429 aa23.01■■□□□ 1.27
TPM4-206ENST00000587201 UBN2Q6ZU65 1347 aa23.01■■□□□ 1.27
TPM4-206ENST00000587201 NPR1P16066 1061 aa23■■□□□ 1.27
TPM4-206ENST00000587201 DUSP27Q5VZP5 1158 aa23■■□□□ 1.27
TPM4-206ENST00000587201 PRPF40BQ6NWY9 871 aaKnown RBP23■■□□□ 1.27
TPM4-206ENST00000587201 ZNF34Q8IZ26 560 aa23■■□□□ 1.27
TPM4-206ENST00000587201 XAGE3Q8WTP9 111 aa23■■□□□ 1.27
TPM4-206ENST00000587201 KLRG2A4D1S0 409 aaPredicted RBP22.99■■□□□ 1.27
TPM4-206ENST00000587201 LMNB1P20700 586 aa22.99■■□□□ 1.27
TPM4-206ENST00000587201 SUSD4Q5VX71 490 aa22.99■■□□□ 1.27
TPM4-206ENST00000587201 CHPF2Q9P2E5 772 aa22.99■■□□□ 1.27
TPM4-206ENST00000587201 SENP3-EIF4A1A0A087X0R7 540 aa22.98■■□□□ 1.27
TPM4-206ENST00000587201 NFKBIEO00221 500 aa22.98■■□□□ 1.27
TPM4-206ENST00000587201 ERFEQ4G0M1 354 aa22.98■■□□□ 1.27
TPM4-206ENST00000587201 PARP10Q53GL7 1025 aa22.98■■□□□ 1.27
TPM4-206ENST00000587201 PPP1R42Q7Z4L9 355 aa22.98■■□□□ 1.27
TPM4-206ENST00000587201 SBF1O95248 1867 aa22.97■■□□□ 1.27
TPM4-206ENST00000587201 ABCC12Q96J65 1359 aa22.97■■□□□ 1.27
TPM4-206ENST00000587201 IBTKQ9P2D0 1353 aaPredicted RBP22.97■■□□□ 1.27
TPM4-206ENST00000587201 KIF3CO14782 793 aa22.96■■□□□ 1.27
TPM4-206ENST00000587201 PRELPP51888 382 aa22.96■■□□□ 1.27
TPM4-206ENST00000587201 HSP90AB3PQ58FF7 597 aa22.96■■□□□ 1.27
TPM4-206ENST00000587201 SOGA3Q5TF21 947 aa22.96■■□□□ 1.27
TPM4-206ENST00000587201 DBF4Q9UBU7 674 aaPredicted RBP22.96■■□□□ 1.27
TPM4-206ENST00000587201 SLX4Q8IY92 1834 aa22.96■■□□□ 1.27
TPM4-206ENST00000587201 NTSR2O95665 410 aa22.95■■□□□ 1.26
TPM4-206ENST00000587201 CACNA1SQ13698 1873 aa22.95■■□□□ 1.26
TPM4-206ENST00000587201 KDM2BQ8NHM5 1336 aa22.94■■□□□ 1.26
TPM4-206ENST00000587201 ELL2O00472 640 aaPredicted RBP22.94■■□□□ 1.26
TPM4-206ENST00000587201 ALDH1B1P30837 517 aa22.94■■□□□ 1.26
TPM4-206ENST00000587201 ZC3H4Q9UPT8 1303 aaKnown RBP22.93■■□□□ 1.26
TPM4-206ENST00000587201 CCDC27Q2M243 656 aa22.93■■□□□ 1.26
TPM4-206ENST00000587201 UTP14AQ9BVJ6 771 aaKnown RBP22.93■■□□□ 1.26
TPM4-206ENST00000587201 TAOK3Q9H2K8 898 aa22.93■■□□□ 1.26
TPM4-206ENST00000587201 NMRK2Q9NPI5 230 aa22.93■■□□□ 1.26
TPM4-206ENST00000587201 ARFGEF2Q9Y6D5 1785 aa22.93■■□□□ 1.26
TPM4-206ENST00000587201 TNRC6CQ9HCJ0 1690 aaKnown RBP22.93■■□□□ 1.26
TPM4-206ENST00000587201 CRY2Q49AN0 593 aa22.92■■□□□ 1.26
TPM4-206ENST00000587201 HYPKQ9NX55 129 aa22.92■■□□□ 1.26
TPM4-206ENST00000587201 LTBP3Q9NS15 1303 aa22.91■■□□□ 1.26
TPM4-206ENST00000587201 TCIRG1Q13488 830 aa22.91■■□□□ 1.26
TPM4-206ENST00000587201 CCDC93Q567U6 631 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms