RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 ZNF652Q9Y2D9 606 aa26.9■■□□□ 1.9
CIRBP-209ENST00000586555 NBPF26B4DH59 902 aa26.89■■□□□ 1.9
CIRBP-209ENST00000586555 H0YIN7 160 aa26.89■■□□□ 1.9
CIRBP-209ENST00000586555 CHL1O00533 1208 aa26.89■■□□□ 1.9
CIRBP-209ENST00000586555 PRR5LQ6MZQ0 368 aa26.89■■□□□ 1.9
CIRBP-209ENST00000586555 NBPF10Q6P3W6 841 aaKnown RBP26.89■■□□□ 1.9
CIRBP-209ENST00000586555 NBPF15Q8N660 670 aa26.89■■□□□ 1.9
CIRBP-209ENST00000586555 NMRK2Q9NPI5 230 aa26.89■■□□□ 1.9
CIRBP-209ENST00000586555 RNF181Q9P0P0 153 aa26.89■■□□□ 1.9
CIRBP-209ENST00000586555 CLEC4GQ6UXB4 293 aa26.88■■□□□ 1.89
CIRBP-209ENST00000586555 BRIP1Q9BX63 1249 aa26.88■■□□□ 1.89
CIRBP-209ENST00000586555 PDZRN3Q9UPQ7 1066 aa26.88■■□□□ 1.89
CIRBP-209ENST00000586555 BCORQ6W2J9 1755 aa26.88■■□□□ 1.89
CIRBP-209ENST00000586555 TOMM70O94826 608 aa26.87■■□□□ 1.89
CIRBP-209ENST00000586555 CFAP44Q96MT7 982 aa26.87■■□□□ 1.89
CIRBP-209ENST00000586555 SETDB2Q96T68 719 aa26.87■■□□□ 1.89
CIRBP-209ENST00000586555 ERBB4Q15303 1308 aa26.87■■□□□ 1.89
CIRBP-209ENST00000586555 RGL2O15211 777 aa26.86■■□□□ 1.89
CIRBP-209ENST00000586555 PDE6BP35913 854 aa26.84■■□□□ 1.89
CIRBP-209ENST00000586555 PRELPP51888 382 aa26.84■■□□□ 1.89
CIRBP-209ENST00000586555 RASSF7Q02833 373 aa26.84■■□□□ 1.89
CIRBP-209ENST00000586555 CCDC88AQ3V6T2 1871 aa26.84■■□□□ 1.89
CIRBP-209ENST00000586555 NPHP1O15259 732 aa26.83■■□□□ 1.89
CIRBP-209ENST00000586555 EIF2S2P20042 333 aaKnown RBP26.83■■□□□ 1.89
CIRBP-209ENST00000586555 GNAI1P63096 354 aa26.83■■□□□ 1.89
CIRBP-209ENST00000586555 MYL6BP14649 208 aa26.82■■□□□ 1.88
CIRBP-209ENST00000586555 KIF6Q6ZMV9 814 aa26.82■■□□□ 1.88
CIRBP-209ENST00000586555 CCDC24Q8N4L8 307 aa26.82■■□□□ 1.88
CIRBP-209ENST00000586555 NGEFQ8N5V2 710 aa26.82■■□□□ 1.88
CIRBP-209ENST00000586555 ZC3H4Q9UPT8 1303 aaKnown RBP26.82■■□□□ 1.88
CIRBP-209ENST00000586555 LMNB1P20700 586 aa26.81■■□□□ 1.88
CIRBP-209ENST00000586555 IFT57Q9NWB7 429 aa26.81■■□□□ 1.88
CIRBP-209ENST00000586555 KDM2BQ8NHM5 1336 aa26.81■■□□□ 1.88
CIRBP-209ENST00000586555 COL11A2P13942 1736 aaPredicted RBP26.81■■□□□ 1.88
CIRBP-209ENST00000586555 NFKBIEO00221 500 aa26.8■■□□□ 1.88
CIRBP-209ENST00000586555 CNBD1Q8NA66 436 aa26.8■■□□□ 1.88
CIRBP-209ENST00000586555 ERVV-1B6SEH8 477 aa26.79■■□□□ 1.88
CIRBP-209ENST00000586555 RBM46Q8TBY0 533 aaKnown RBP26.79■■□□□ 1.88
CIRBP-209ENST00000586555 ZNF622Q969S3 477 aaKnown RBP eCLIP26.79■■□□□ 1.88
CIRBP-209ENST00000586555 HOXB7P09629 217 aa26.78■■□□□ 1.88
CIRBP-209ENST00000586555 CCDC27Q2M243 656 aa26.78■■□□□ 1.88
CIRBP-209ENST00000586555 NCBP3Q53F19 620 aaKnown RBP26.78■■□□□ 1.88
CIRBP-209ENST00000586555 FER1L6Q2WGJ9 1857 aa26.77■■□□□ 1.88
CIRBP-209ENST00000586555 ST5P78524 1137 aa26.77■■□□□ 1.88
CIRBP-209ENST00000586555 RRAGCQ9HB90 399 aa26.77■■□□□ 1.88
CIRBP-209ENST00000586555 MBIPQ9NS73 344 aa26.77■■□□□ 1.88
CIRBP-209ENST00000586555 MAP3K15Q6ZN16 1313 aa26.76■■□□□ 1.87
CIRBP-209ENST00000586555 ZNF853P0CG23 659 aa26.76■■□□□ 1.87
CIRBP-209ENST00000586555 SRGNP10124 158 aa26.76■■□□□ 1.87
CIRBP-209ENST00000586555 NIP7Q9Y221 180 aaKnown RBP eCLIP26.76■■□□□ 1.87
CIRBP-209ENST00000586555 TNRC6CQ9HCJ0 1690 aaKnown RBP26.76■■□□□ 1.87
CIRBP-209ENST00000586555 SLX4Q8IY92 1834 aa26.75■■□□□ 1.87
CIRBP-209ENST00000586555 APLP1P51693 650 aa26.75■■□□□ 1.87
CIRBP-209ENST00000586555 STYK1Q6J9G0 422 aa26.75■■□□□ 1.87
CIRBP-209ENST00000586555 NBPF5PQ86XG9 351 aaPredicted RBP26.75■■□□□ 1.87
CIRBP-209ENST00000586555 DICER1Q9UPY3 1922 aaKnown RBP26.75■■□□□ 1.87
CIRBP-209ENST00000586555 C21orf2O43822 256 aa26.74■■□□□ 1.87
CIRBP-209ENST00000586555 TPTE2Q6XPS3 522 aa26.74■■□□□ 1.87
CIRBP-209ENST00000586555 FAM9BQ8IZU0 186 aa26.74■■□□□ 1.87
CIRBP-209ENST00000586555 NECTIN2Q92692 538 aa26.74■■□□□ 1.87
CIRBP-209ENST00000586555 CHMP4AQ9BY43 222 aa26.74■■□□□ 1.87
CIRBP-209ENST00000586555 GLTPD2A6NH11 291 aa26.73■■□□□ 1.87
CIRBP-209ENST00000586555 PDIA6Q15084 440 aa26.73■■□□□ 1.87
CIRBP-209ENST00000586555 HLFQ16534 295 aa26.73■■□□□ 1.87
CIRBP-209ENST00000586555 HDGFL1Q5TGJ6 251 aa26.73■■□□□ 1.87
CIRBP-209ENST00000586555 TTLL7Q6ZT98 887 aa26.73■■□□□ 1.87
CIRBP-209ENST00000586555 CNKSR1Q969H4 720 aa26.73■■□□□ 1.87
CIRBP-209ENST00000586555 ARFGEF2Q9Y6D5 1785 aa26.72■■□□□ 1.87
CIRBP-209ENST00000586555 KLRG2A4D1S0 409 aaPredicted RBP26.72■■□□□ 1.87
CIRBP-209ENST00000586555 KRT24Q2M2I5 525 aa26.72■■□□□ 1.87
CIRBP-209ENST00000586555 DUSP27Q5VZP5 1158 aa26.72■■□□□ 1.87
CIRBP-209ENST00000586555 WWC1Q8IX03 1113 aa26.72■■□□□ 1.87
CIRBP-209ENST00000586555 C16orf71Q8IYS4 520 aaPredicted RBP26.72■■□□□ 1.87
CIRBP-209ENST00000586555 MASTLQ96GX5 879 aa26.72■■□□□ 1.87
CIRBP-209ENST00000586555 DDX21Q9NR30 783 aaKnown RBP eCLIP26.72■■□□□ 1.87
CIRBP-209ENST00000586555 FSTL1Q12841 308 aa26.71■■□□□ 1.87
CIRBP-209ENST00000586555 ZBTB3Q9H5J0 574 aa26.71■■□□□ 1.87
CIRBP-209ENST00000586555 CACNA1SQ13698 1873 aa26.7■■□□□ 1.87
CIRBP-209ENST00000586555 LTBP3Q9NS15 1303 aa26.7■■□□□ 1.87
CIRBP-209ENST00000586555 GTF2E1P29083 439 aaPredicted RBP26.7■■□□□ 1.86
CIRBP-209ENST00000586555 ZNF219Q9P2Y4 722 aaPredicted RBP26.7■■□□□ 1.86
CIRBP-209ENST00000586555 DBF4Q9UBU7 674 aaPredicted RBP26.7■■□□□ 1.86
CIRBP-209ENST00000586555 TIAM2Q8IVF5 1701 aa26.7■■□□□ 1.86
CIRBP-209ENST00000586555 GIGYF2Q6Y7W6 1299 aaKnown RBP26.69■■□□□ 1.86
CIRBP-209ENST00000586555 DNAJC5GQ8N7S2 189 aa26.69■■□□□ 1.86
CIRBP-209ENST00000586555 C7orf43Q8WVR3 580 aa26.69■■□□□ 1.86
CIRBP-209ENST00000586555 NYXQ9GZU5 481 aa26.69■■□□□ 1.86
CIRBP-209ENST00000586555 NUP98P52948 1817 aa26.68■■□□□ 1.86
CIRBP-209ENST00000586555 PRPF40BQ6NWY9 871 aaKnown RBP26.68■■□□□ 1.86
CIRBP-209ENST00000586555 IL16Q14005 1332 aa26.67■■□□□ 1.86
CIRBP-209ENST00000586555 ANXA1P04083 346 aa26.67■■□□□ 1.86
CIRBP-209ENST00000586555 AIMP1Q12904 312 aaKnown RBP26.67■■□□□ 1.86
CIRBP-209ENST00000586555 PROSER3Q2NL68 480 aa26.67■■□□□ 1.86
CIRBP-209ENST00000586555 COPS6Q7L5N1 327 aa26.67■■□□□ 1.86
CIRBP-209ENST00000586555 LRP10Q7Z4F1 713 aa26.67■■□□□ 1.86
CIRBP-209ENST00000586555 CHPF2Q9P2E5 772 aa26.67■■□□□ 1.86
CIRBP-209ENST00000586555 FAM177BA6PVY3 158 aa26.66■■□□□ 1.86
CIRBP-209ENST00000586555 VEGFAP15692 232 aaPredicted RBP26.66■■□□□ 1.86
CIRBP-209ENST00000586555 NPR1P16066 1061 aa26.66■■□□□ 1.86
CIRBP-209ENST00000586555 HYPKQ9NX55 129 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms