RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 CHRNA5P30532 468 aa16.12■□□□□ 0.17
ERCC2-207ENST00000586441 NEUROD2Q15784 382 aa16.12■□□□□ 0.17
ERCC2-207ENST00000586441 PRR5LQ6MZQ0 368 aa16.12■□□□□ 0.17
ERCC2-207ENST00000586441 TPTE2Q6XPS3 522 aa16.12■□□□□ 0.17
ERCC2-207ENST00000586441 CNBD1Q8NA66 436 aa16.12■□□□□ 0.17
ERCC2-207ENST00000586441 RRP7AQ9Y3A4 280 aaKnown RBP16.12■□□□□ 0.17
ERCC2-207ENST00000586441 DLEC1Q9Y238 1755 aa16.12■□□□□ 0.17
ERCC2-207ENST00000586441 PIP4K2AP48426 406 aaPredicted RBP16.11■□□□□ 0.17
ERCC2-207ENST00000586441 ST5P78524 1137 aa16.11■□□□□ 0.17
ERCC2-207ENST00000586441 ARHGAP27Q6ZUM4 889 aa16.11■□□□□ 0.17
ERCC2-207ENST00000586441 TTLL6Q8N841 843 aa16.11■□□□□ 0.17
ERCC2-207ENST00000586441 MAP3K15Q6ZN16 1313 aa16.11■□□□□ 0.17
ERCC2-207ENST00000586441 KLRG2A4D1S0 409 aaPredicted RBP16.1■□□□□ 0.17
ERCC2-207ENST00000586441 C2CD5Q86YS7 1000 aa16.1■□□□□ 0.17
ERCC2-207ENST00000586441 APAF1O14727 1248 aa16.09■□□□□ 0.17
ERCC2-207ENST00000586441 ZNF853P0CG23 659 aa16.09■□□□□ 0.17
ERCC2-207ENST00000586441 PDIA6Q15084 440 aa16.09■□□□□ 0.17
ERCC2-207ENST00000586441 KIF6Q6ZMV9 814 aa16.09■□□□□ 0.17
ERCC2-207ENST00000586441 LRP10Q7Z4F1 713 aa16.09■□□□□ 0.17
ERCC2-207ENST00000586441 NBPF5PQ86XG9 351 aaPredicted RBP16.09■□□□□ 0.17
ERCC2-207ENST00000586441 CHMP4AQ9BY43 222 aa16.09■□□□□ 0.17
ERCC2-207ENST00000586441 WWC3Q9ULE0 1092 aa16.09■□□□□ 0.17
ERCC2-207ENST00000586441 NIP7Q9Y221 180 aaKnown RBP eCLIP16.09■□□□□ 0.17
ERCC2-207ENST00000586441 NUP98P52948 1817 aa16.08■□□□□ 0.17
ERCC2-207ENST00000586441 ANKRD31Q8N7Z5 1873 aa16.08■□□□□ 0.17
ERCC2-207ENST00000586441 NPHP1O15259 732 aa16.08■□□□□ 0.16
ERCC2-207ENST00000586441 HLFQ16534 295 aa16.08■□□□□ 0.16
ERCC2-207ENST00000586441 CCDC27Q2M243 656 aa16.08■□□□□ 0.16
ERCC2-207ENST00000586441 STYK1Q6J9G0 422 aa16.08■□□□□ 0.16
ERCC2-207ENST00000586441 GIGYF2Q6Y7W6 1299 aaKnown RBP16.08■□□□□ 0.16
ERCC2-207ENST00000586441 NYXQ9GZU5 481 aa16.08■□□□□ 0.16
ERCC2-207ENST00000586441 ATP10DQ9P241 1426 aa16.08■□□□□ 0.16
ERCC2-207ENST00000586441 SRGNP10124 158 aa16.07■□□□□ 0.16
ERCC2-207ENST00000586441 MYL6BP14649 208 aa16.07■□□□□ 0.16
ERCC2-207ENST00000586441 GNAI1P63096 354 aa16.07■□□□□ 0.16
ERCC2-207ENST00000586441 CNKSR1Q969H4 720 aa16.07■□□□□ 0.16
ERCC2-207ENST00000586441 MRS2Q9HD23 443 aa16.07■□□□□ 0.16
ERCC2-207ENST00000586441 DDX21Q9NR30 783 aaKnown RBP eCLIP16.07■□□□□ 0.16
ERCC2-207ENST00000586441 IFT57Q9NWB7 429 aa16.07■□□□□ 0.16
ERCC2-207ENST00000586441 IBTKQ9P2D0 1353 aaPredicted RBP16.07■□□□□ 0.16
ERCC2-207ENST00000586441 MASTLQ96GX5 879 aa16.06■□□□□ 0.16
ERCC2-207ENST00000586441 ZC3H4Q9UPT8 1303 aaKnown RBP16.05■□□□□ 0.16
ERCC2-207ENST00000586441 EIF2S2P20042 333 aaKnown RBP16.05■□□□□ 0.16
ERCC2-207ENST00000586441 TTLL7Q6ZT98 887 aa16.05■□□□□ 0.16
ERCC2-207ENST00000586441 ZNF34Q8IZ26 560 aa16.05■□□□□ 0.16
ERCC2-207ENST00000586441 GPBP1L1Q9HC44 474 aaPredicted RBP16.05■□□□□ 0.16
ERCC2-207ENST00000586441 SBF1O95248 1867 aa16.05■□□□□ 0.16
ERCC2-207ENST00000586441 CCDC184Q52MB2 194 aa16.04■□□□□ 0.16
ERCC2-207ENST00000586441 PARP10Q53GL7 1025 aa16.04■□□□□ 0.16
ERCC2-207ENST00000586441 SOGA3Q5TF21 947 aa16.04■□□□□ 0.16
ERCC2-207ENST00000586441 NGEFQ8N5V2 710 aa16.04■□□□□ 0.16
ERCC2-207ENST00000586441 MBIPQ9NS73 344 aa16.04■□□□□ 0.16
ERCC2-207ENST00000586441 DBF4Q9UBU7 674 aaPredicted RBP16.04■□□□□ 0.16
ERCC2-207ENST00000586441 LAS1LQ9Y4W2 734 aaKnown RBP16.04■□□□□ 0.16
ERCC2-207ENST00000586441 RIC1Q4ADV7 1423 aa16.03■□□□□ 0.16
ERCC2-207ENST00000586441 RNF123Q5XPI4 1314 aa16.03■□□□□ 0.16
ERCC2-207ENST00000586441 NPR1P16066 1061 aa16.03■□□□□ 0.16
ERCC2-207ENST00000586441 HSP90AB3PQ58FF7 597 aa16.03■□□□□ 0.16
ERCC2-207ENST00000586441 ZNF622Q969S3 477 aaKnown RBP eCLIP16.03■□□□□ 0.16
ERCC2-207ENST00000586441 LTBP3Q9NS15 1303 aa16.02■□□□□ 0.16
ERCC2-207ENST00000586441 GTF2E1P29083 439 aaPredicted RBP16.02■□□□□ 0.16
ERCC2-207ENST00000586441 C1QTNF8P60827 252 aa16.02■□□□□ 0.16
ERCC2-207ENST00000586441 CRY2Q49AN0 593 aa16.02■□□□□ 0.16
ERCC2-207ENST00000586441 C9orf131Q5VYM1 1079 aa16.02■□□□□ 0.16
ERCC2-207ENST00000586441 PPP1R42Q7Z4L9 355 aa16.02■□□□□ 0.16
ERCC2-207ENST00000586441 HYPKQ9NX55 129 aa16.02■□□□□ 0.16
ERCC2-207ENST00000586441 LMNB1P20700 586 aa16.01■□□□□ 0.15
ERCC2-207ENST00000586441 ALDH1B1P30837 517 aa16.01■□□□□ 0.15
ERCC2-207ENST00000586441 HDGFL1Q5TGJ6 251 aa16.01■□□□□ 0.15
ERCC2-207ENST00000586441 DUSP27Q5VZP5 1158 aa16.01■□□□□ 0.15
ERCC2-207ENST00000586441 COPS6Q7L5N1 327 aa16.01■□□□□ 0.15
ERCC2-207ENST00000586441 ZBTB3Q9H5J0 574 aa16.01■□□□□ 0.15
ERCC2-207ENST00000586441 ARFGEF2Q9Y6D5 1785 aa16■□□□□ 0.15
ERCC2-207ENST00000586441 IL16Q14005 1332 aa16■□□□□ 0.15
ERCC2-207ENST00000586441 PROSER3Q2NL68 480 aa16■□□□□ 0.15
ERCC2-207ENST00000586441 SLC10A5Q5PT55 438 aa16■□□□□ 0.15
ERCC2-207ENST00000586441 WWC1Q8IX03 1113 aa16■□□□□ 0.15
ERCC2-207ENST00000586441 CCDC24Q8N4L8 307 aa16■□□□□ 0.15
ERCC2-207ENST00000586441 C7orf43Q8WVR3 580 aa16■□□□□ 0.15
ERCC2-207ENST00000586441 COL11A2P13942 1736 aaPredicted RBP15.99■□□□□ 0.15
ERCC2-207ENST00000586441 UBN2Q6ZU65 1347 aa15.99■□□□□ 0.15
ERCC2-207ENST00000586441 HNRNPUQ00839 825 aaKnown RBP eCLIP15.99■□□□□ 0.15
ERCC2-207ENST00000586441 TCIRG1Q13488 830 aa15.99■□□□□ 0.15
ERCC2-207ENST00000586441 KRT24Q2M2I5 525 aa15.99■□□□□ 0.15
ERCC2-207ENST00000586441 GRIPAP1Q4V328 841 aa15.99■□□□□ 0.15
ERCC2-207ENST00000586441 SUSD4Q5VX71 490 aa15.99■□□□□ 0.15
ERCC2-207ENST00000586441 PRPF40BQ6NWY9 871 aaKnown RBP15.99■□□□□ 0.15
ERCC2-207ENST00000586441 PLBD2Q8NHP8 589 aa15.99■□□□□ 0.15
ERCC2-207ENST00000586441 XAGE3Q8WTP9 111 aa15.99■□□□□ 0.15
ERCC2-207ENST00000586441 RNF181Q9P0P0 153 aa15.99■□□□□ 0.15
ERCC2-207ENST00000586441 FER1L6Q2WGJ9 1857 aa15.99■□□□□ 0.15
ERCC2-207ENST00000586441 SLX4Q8IY92 1834 aa15.98■□□□□ 0.15
ERCC2-207ENST00000586441 HOXA10P31260 410 aaPredicted RBP15.98■□□□□ 0.15
ERCC2-207ENST00000586441 ANKRD13DQ6ZTN6 518 aa15.98■□□□□ 0.15
ERCC2-207ENST00000586441 CHPF2Q9P2E5 772 aa15.98■□□□□ 0.15
ERCC2-207ENST00000586441 KDM2BQ8NHM5 1336 aa15.97■□□□□ 0.15
ERCC2-207ENST00000586441 NFKBIEO00221 500 aa15.97■□□□□ 0.15
ERCC2-207ENST00000586441 C21orf2O43822 256 aa15.97■□□□□ 0.15
ERCC2-207ENST00000586441 NTSR2O95665 410 aa15.97■□□□□ 0.15
ERCC2-207ENST00000586441 TRIM28Q13263 835 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms