RNA–Protein interactions for RNA: ENST00000585900.1

HMG20B-216, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-216ENST00000585900 NIP7Q9Y221 180 aaKnown RBP eCLIP23.85■■□□□ 1.41
HMG20B-216ENST00000585900 ANKRD31Q8N7Z5 1873 aa23.84■■□□□ 1.41
HMG20B-216ENST00000585900 KIF6Q6ZMV9 814 aa23.84■■□□□ 1.41
HMG20B-216ENST00000585900 NGEFQ8N5V2 710 aa23.84■■□□□ 1.41
HMG20B-216ENST00000585900 RUNDC1Q96C34 613 aa23.84■■□□□ 1.41
HMG20B-216ENST00000585900 PRKRIP1Q9H875 184 aaPredicted RBP23.84■■□□□ 1.41
HMG20B-216ENST00000585900 BABAM1Q9NWV8 329 aa23.84■■□□□ 1.41
HMG20B-216ENST00000585900 RASSF7Q02833 373 aa23.83■■□□□ 1.41
HMG20B-216ENST00000585900 TPTE2Q6XPS3 522 aa23.83■■□□□ 1.41
HMG20B-216ENST00000585900 RRP7AQ9Y3A4 280 aaKnown RBP23.83■■□□□ 1.41
HMG20B-216ENST00000585900 ERBB4Q15303 1308 aa23.83■■□□□ 1.4
HMG20B-216ENST00000585900 KDM2BQ8NHM5 1336 aa23.83■■□□□ 1.4
HMG20B-216ENST00000585900 KIF3CO14782 793 aa23.82■■□□□ 1.4
HMG20B-216ENST00000585900 MYL6BP14649 208 aa23.82■■□□□ 1.4
HMG20B-216ENST00000585900 ZEB1P37275 1124 aaPredicted RBP23.82■■□□□ 1.4
HMG20B-216ENST00000585900 NEUROD2Q15784 382 aa23.82■■□□□ 1.4
HMG20B-216ENST00000585900 CNKSR1Q969H4 720 aa23.82■■□□□ 1.4
HMG20B-216ENST00000585900 LMNB1P20700 586 aa23.81■■□□□ 1.4
HMG20B-216ENST00000585900 STYK1Q6J9G0 422 aa23.81■■□□□ 1.4
HMG20B-216ENST00000585900 COL11A2P13942 1736 aaPredicted RBP23.81■■□□□ 1.4
HMG20B-216ENST00000585900 ZC3H4Q9UPT8 1303 aaKnown RBP23.81■■□□□ 1.4
HMG20B-216ENST00000585900 ERVV-1B6SEH8 477 aa23.8■■□□□ 1.4
HMG20B-216ENST00000585900 GTF2E1P29083 439 aaPredicted RBP23.8■■□□□ 1.4
HMG20B-216ENST00000585900 MASTLQ96GX5 879 aa23.8■■□□□ 1.4
HMG20B-216ENST00000585900 MAP3K15Q6ZN16 1313 aa23.8■■□□□ 1.4
HMG20B-216ENST00000585900 FAM177BA6PVY3 158 aa23.79■■□□□ 1.4
HMG20B-216ENST00000585900 SRGNP10124 158 aa23.79■■□□□ 1.4
HMG20B-216ENST00000585900 HLFQ16534 295 aa23.79■■□□□ 1.4
HMG20B-216ENST00000585900 C21orf2O43822 256 aa23.78■■□□□ 1.4
HMG20B-216ENST00000585900 NMRK2Q9NPI5 230 aa23.78■■□□□ 1.4
HMG20B-216ENST00000585900 ZNF219Q9P2Y4 722 aaPredicted RBP23.78■■□□□ 1.4
HMG20B-216ENST00000585900 ADAMTS8Q9UP79 889 aa23.78■■□□□ 1.4
HMG20B-216ENST00000585900 SOGA3Q5TF21 947 aa23.77■■□□□ 1.4
HMG20B-216ENST00000585900 C16orf71Q8IYS4 520 aaPredicted RBP23.77■■□□□ 1.4
HMG20B-216ENST00000585900 NYXQ9GZU5 481 aa23.77■■□□□ 1.4
HMG20B-216ENST00000585900 NFKBIEO00221 500 aa23.76■■□□□ 1.39
HMG20B-216ENST00000585900 EIF2S2P20042 333 aaKnown RBP23.76■■□□□ 1.39
HMG20B-216ENST00000585900 PRPF40BQ6NWY9 871 aaKnown RBP23.76■■□□□ 1.39
HMG20B-216ENST00000585900 ZBTB3Q9H5J0 574 aa23.76■■□□□ 1.39
HMG20B-216ENST00000585900 TOMM70O94826 608 aa23.75■■□□□ 1.39
HMG20B-216ENST00000585900 NPR1P16066 1061 aa23.75■■□□□ 1.39
HMG20B-216ENST00000585900 TTLL7Q6ZT98 887 aa23.75■■□□□ 1.39
HMG20B-216ENST00000585900 LAS1LQ9Y4W2 734 aaKnown RBP23.75■■□□□ 1.39
HMG20B-216ENST00000585900 HSPA6P17066 643 aa23.74■■□□□ 1.39
HMG20B-216ENST00000585900 SBF1O95248 1867 aa23.74■■□□□ 1.39
HMG20B-216ENST00000585900 TAOK3Q9H2K8 898 aa23.73■■□□□ 1.39
HMG20B-216ENST00000585900 TRIM35Q9UPQ4 493 aa23.72■■□□□ 1.39
HMG20B-216ENST00000585900 IBTKQ9P2D0 1353 aaPredicted RBP23.72■■□□□ 1.39
HMG20B-216ENST00000585900 LTBP3Q9NS15 1303 aa23.71■■□□□ 1.39
HMG20B-216ENST00000585900 KLRG2A4D1S0 409 aaPredicted RBP23.71■■□□□ 1.39
HMG20B-216ENST00000585900 CHL1O00533 1208 aa23.71■■□□□ 1.39
HMG20B-216ENST00000585900 GPTP24298 496 aa23.71■■□□□ 1.39
HMG20B-216ENST00000585900 ARFGEF2Q9Y6D5 1785 aa23.7■■□□□ 1.39
HMG20B-216ENST00000585900 TIAM2Q8IVF5 1701 aa23.7■■□□□ 1.39
HMG20B-216ENST00000585900 TNRC6CQ9HCJ0 1690 aaKnown RBP23.7■■□□□ 1.39
HMG20B-216ENST00000585900 GIGYF2Q6Y7W6 1299 aaKnown RBP23.7■■□□□ 1.38
HMG20B-216ENST00000585900 PRELPP51888 382 aa23.69■■□□□ 1.38
HMG20B-216ENST00000585900 CCDC93Q567U6 631 aa23.69■■□□□ 1.38
HMG20B-216ENST00000585900 NUP98P52948 1817 aa23.68■■□□□ 1.38
HMG20B-216ENST00000585900 ABCC12Q96J65 1359 aa23.68■■□□□ 1.38
HMG20B-216ENST00000585900 GLTPD2A6NH11 291 aa23.68■■□□□ 1.38
HMG20B-216ENST00000585900 ALDH1B1P30837 517 aa23.68■■□□□ 1.38
HMG20B-216ENST00000585900 PDIA6Q15084 440 aa23.68■■□□□ 1.38
HMG20B-216ENST00000585900 ERFEQ4G0M1 354 aa23.68■■□□□ 1.38
HMG20B-216ENST00000585900 PARP10Q53GL7 1025 aa23.68■■□□□ 1.38
HMG20B-216ENST00000585900 NUTM1Q86Y26 1132 aa23.68■■□□□ 1.38
HMG20B-216ENST00000585900 RBM46Q8TBY0 533 aaKnown RBP23.68■■□□□ 1.38
HMG20B-216ENST00000585900 NECTIN2Q92692 538 aa23.68■■□□□ 1.38
HMG20B-216ENST00000585900 RRAGCQ9HB90 399 aa23.68■■□□□ 1.38
HMG20B-216ENST00000585900 CACNA1SQ13698 1873 aa23.68■■□□□ 1.38
HMG20B-216ENST00000585900 SLX4Q8IY92 1834 aa23.68■■□□□ 1.38
HMG20B-216ENST00000585900 UBN2Q6ZU65 1347 aa23.67■■□□□ 1.38
HMG20B-216ENST00000585900 CALD1Q05682 793 aaKnown RBP23.67■■□□□ 1.38
HMG20B-216ENST00000585900 DPY19L2Q6NUT2 758 aa23.67■■□□□ 1.38
HMG20B-216ENST00000585900 PPP1R42Q7Z4L9 355 aa23.67■■□□□ 1.38
HMG20B-216ENST00000585900 RIC1Q4ADV7 1423 aa23.67■■□□□ 1.38
HMG20B-216ENST00000585900 FER1L6Q2WGJ9 1857 aa23.66■■□□□ 1.38
HMG20B-216ENST00000585900 ANXA1P04083 346 aa23.66■■□□□ 1.38
HMG20B-216ENST00000585900 HOXB7P09629 217 aa23.66■■□□□ 1.38
HMG20B-216ENST00000585900 PROSER3Q2NL68 480 aa23.66■■□□□ 1.38
HMG20B-216ENST00000585900 LRP10Q7Z4F1 713 aa23.66■■□□□ 1.38
HMG20B-216ENST00000585900 ZNF34Q8IZ26 560 aa23.66■■□□□ 1.38
HMG20B-216ENST00000585900 RPGRQ92834 1020 aaKnown RBP23.66■■□□□ 1.38
HMG20B-216ENST00000585900 CFAP44Q96MT7 982 aa23.66■■□□□ 1.38
HMG20B-216ENST00000585900 HSP90AB3PQ58FF7 597 aa23.65■■□□□ 1.38
HMG20B-216ENST00000585900 HDGFL1Q5TGJ6 251 aa23.65■■□□□ 1.38
HMG20B-216ENST00000585900 SUSD4Q5VX71 490 aa23.65■■□□□ 1.38
HMG20B-216ENST00000585900 DDX21Q9NR30 783 aaKnown RBP eCLIP23.65■■□□□ 1.38
HMG20B-216ENST00000585900 APAF1O14727 1248 aa23.64■■□□□ 1.37
HMG20B-216ENST00000585900 AIMP1Q12904 312 aaKnown RBP23.64■■□□□ 1.37
HMG20B-216ENST00000585900 KRT24Q2M2I5 525 aa23.64■■□□□ 1.37
HMG20B-216ENST00000585900 CRY2Q49AN0 593 aa23.64■■□□□ 1.37
HMG20B-216ENST00000585900 XAGE3Q8WTP9 111 aa23.64■■□□□ 1.37
HMG20B-216ENST00000585900 NTSR2O95665 410 aa23.63■■□□□ 1.37
HMG20B-216ENST00000585900 VEGFAP15692 232 aaPredicted RBP23.63■■□□□ 1.37
HMG20B-216ENST00000585900 APLP1P51693 650 aa23.63■■□□□ 1.37
HMG20B-216ENST00000585900 FSTL1Q12841 308 aa23.63■■□□□ 1.37
HMG20B-216ENST00000585900 COPS6Q7L5N1 327 aa23.63■■□□□ 1.37
HMG20B-216ENST00000585900 RTKN2Q8IZC4 609 aa23.63■■□□□ 1.37
HMG20B-216ENST00000585900 C7orf43Q8WVR3 580 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms