RNA–Protein interactions for RNA: ENST00000585895.1

ARID3A-204, Transcript of AT-rich interaction domain 3A, human

TSL 2

Gene ARID3A, Length 377 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID3A-204	ENST00000585895	MSL1	Q68DK7	614 aa		33.4	■■■□□ 2.94
ARID3A-204	ENST00000585895	ATF5	Q9Y2D1	282 aa	Predicted RBP	33.4	■■■□□ 2.94
ARID3A-204	ENST00000585895	ZNF652	Q9Y2D9	606 aa		33.4	■■■□□ 2.94
ARID3A-204	ENST00000585895	CLEC4G	Q6UXB4	293 aa		33.39	■■■□□ 2.94
ARID3A-204	ENST00000585895	BCL2L12	Q9HB09	334 aa		33.39	■■■□□ 2.94
ARID3A-204	ENST00000585895	SPON1	Q9HCB6	807 aa		33.39	■■■□□ 2.94
ARID3A-204	ENST00000585895	FKBP8	Q14318	412 aa		33.38	■■■□□ 2.93
ARID3A-204	ENST00000585895	ANKRD13D	Q6ZTN6	518 aa		33.37	■■■□□ 2.93
ARID3A-204	ENST00000585895	SSH1	Q8WYL5	1049 aa		33.37	■■■□□ 2.93
ARID3A-204	ENST00000585895	ZBTB3	Q9H5J0	574 aa		33.37	■■■□□ 2.93
ARID3A-204	ENST00000585895	C4A	P0C0L4	1744 aa		33.36	■■■□□ 2.93
ARID3A-204	ENST00000585895	DDX58	O95786	925 aa	Known RBP	33.36	■■■□□ 2.93
ARID3A-204	ENST00000585895	G2E3	Q7L622	706 aa		33.35	■■■□□ 2.93
ARID3A-204	ENST00000585895	PLBD2	Q8NHP8	589 aa		33.35	■■■□□ 2.93
ARID3A-204	ENST00000585895	POLD1	P28340	1107 aa		33.34	■■■□□ 2.93
ARID3A-204	ENST00000585895	RARS	P54136	660 aa	Known RBP	33.34	■■■□□ 2.93
ARID3A-204	ENST00000585895	FLII	Q13045	1269 aa		33.34	■■■□□ 2.93
ARID3A-204	ENST00000585895	HLF	Q16534	295 aa		33.34	■■■□□ 2.93
ARID3A-204	ENST00000585895	MRPL50	Q8N5N7	158 aa	Known RBP	33.34	■■■□□ 2.93
ARID3A-204	ENST00000585895	GIGYF2	Q6Y7W6	1299 aa	Known RBP	33.33	■■■□□ 2.93
ARID3A-204	ENST00000585895	SMC4	Q9NTJ3	1288 aa		33.33	■■■□□ 2.93
ARID3A-204	ENST00000585895	TM4SF1	P30408	202 aa		33.31	■■■□□ 2.92
ARID3A-204	ENST00000585895	RIC3	Q7Z5B4	369 aa		33.31	■■■□□ 2.92
ARID3A-204	ENST00000585895	BCL2L13	Q9BXK5	485 aa		33.31	■■■□□ 2.92
ARID3A-204	ENST00000585895	MMP10	P09238	476 aa		33.3	■■■□□ 2.92
ARID3A-204	ENST00000585895	TBC1D9B	Q66K14	1250 aa		33.3	■■■□□ 2.92
ARID3A-204	ENST00000585895	PTGER2	P43116	358 aa		33.29	■■■□□ 2.92
ARID3A-204	ENST00000585895	FKBP5	Q13451	457 aa	Predicted RBP	33.29	■■■□□ 2.92
ARID3A-204	ENST00000585895	NFIX	Q14938	502 aa		33.29	■■■□□ 2.92
ARID3A-204	ENST00000585895	HSP90AB3P	Q58FF7	597 aa		33.29	■■■□□ 2.92
ARID3A-204	ENST00000585895	KSR2	Q6VAB6	950 aa		33.29	■■■□□ 2.92
ARID3A-204	ENST00000585895	SGIP1	Q9BQI5	828 aa		33.29	■■■□□ 2.92
ARID3A-204	ENST00000585895	BRPF1	P55201	1214 aa	Predicted RBP	33.28	■■■□□ 2.92
ARID3A-204	ENST00000585895	BICDL1	Q6ZP65	573 aa		33.28	■■■□□ 2.92
ARID3A-204	ENST00000585895	SETDB2	Q96T68	719 aa		33.28	■■■□□ 2.92
ARID3A-204	ENST00000585895	SCN7A	Q01118	1682 aa		33.28	■■■□□ 2.92
ARID3A-204	ENST00000585895	PARP3	Q9Y6F1	533 aa		33.27	■■■□□ 2.92
ARID3A-204	ENST00000585895	PI4KAP2	A4QPH2	592 aa		33.26	■■■□□ 2.91
ARID3A-204	ENST00000585895	TCIRG1	Q13488	830 aa		33.26	■■■□□ 2.91
ARID3A-204	ENST00000585895	PI4KAP1	Q8N8J0	262 aa		33.26	■■■□□ 2.91
ARID3A-204	ENST00000585895	NIP7	Q9Y221	180 aa	Known RBP eCLIP	33.26	■■■□□ 2.91
ARID3A-204	ENST00000585895	MAP3K2	Q9Y2U5	619 aa		33.25	■■■□□ 2.91
ARID3A-204	ENST00000585895	BCOR	Q6W2J9	1755 aa		33.24	■■■□□ 2.91
ARID3A-204	ENST00000585895	ATP10D	Q9P241	1426 aa		33.24	■■■□□ 2.91
ARID3A-204	ENST00000585895	PTPRC	P08575	1304 aa		33.24	■■■□□ 2.91
ARID3A-204	ENST00000585895	POLRMT	O00411	1230 aa	Known RBP	33.23	■■■□□ 2.91
ARID3A-204	ENST00000585895	DDR1	Q08345	913 aa		33.23	■■■□□ 2.91
ARID3A-204	ENST00000585895	ZNF34	Q8IZ26	560 aa		33.23	■■■□□ 2.91
ARID3A-204	ENST00000585895	METTL22	Q9BUU2	404 aa	Predicted RBP	33.22	■■■□□ 2.91
ARID3A-204	ENST00000585895	ADCY9	O60503	1353 aa		33.21	■■■□□ 2.91
ARID3A-204	ENST00000585895	CARMIL3	Q8ND23	1372 aa		33.21	■■■□□ 2.91
ARID3A-204	ENST00000585895	GPT	P24298	496 aa		33.21	■■■□□ 2.91
ARID3A-204	ENST00000585895	BCAR3	O75815	825 aa		33.2	■■■□□ 2.91
ARID3A-204	ENST00000585895	SERPINB2	P05120	415 aa		33.2	■■■□□ 2.91
ARID3A-204	ENST00000585895	PARP10	Q53GL7	1025 aa		33.2	■■■□□ 2.91
ARID3A-204	ENST00000585895	KIF16B	Q96L93	1317 aa		33.2	■■■□□ 2.91
ARID3A-204	ENST00000585895	DNAAF4	Q8WXU2	420 aa		33.19	■■■□□ 2.9
ARID3A-204	ENST00000585895	MYD88	Q99836	296 aa		33.19	■■■□□ 2.9
ARID3A-204	ENST00000585895	NOB1	Q9ULX3	412 aa	Known RBP	33.19	■■■□□ 2.9
ARID3A-204	ENST00000585895	COL24A1	Q17RW2	1714 aa		33.19	■■■□□ 2.9
ARID3A-204	ENST00000585895	CACNA1F	O60840	1977 aa		33.18	■■■□□ 2.9
ARID3A-204	ENST00000585895	NEXN	Q0ZGT2	675 aa		33.18	■■■□□ 2.9
ARID3A-204	ENST00000585895	ISCA1	Q9BUE6	129 aa		33.18	■■■□□ 2.9
ARID3A-204	ENST00000585895	RCAN3	Q9UKA8	241 aa		33.18	■■■□□ 2.9
ARID3A-204	ENST00000585895	TRIM28	Q13263	835 aa	Known RBP	33.17	■■■□□ 2.9
ARID3A-204	ENST00000585895	PPP1R1B	Q9UD71	204 aa	Predicted RBP	33.17	■■■□□ 2.9
ARID3A-204	ENST00000585895	NBPF5P	Q86XG9	351 aa	Predicted RBP	33.16	■■■□□ 2.9
ARID3A-204	ENST00000585895	UBN2	Q6ZU65	1347 aa		33.16	■■■□□ 2.9
ARID3A-204	ENST00000585895		F6X3S4	739 aa		33.15	■■■□□ 2.9
ARID3A-204	ENST00000585895	ATP5J2-PTCD1	G3V325	749 aa		33.15	■■■□□ 2.9
ARID3A-204	ENST00000585895	IPO8	O15397	1037 aa	Known RBP	33.15	■■■□□ 2.9
ARID3A-204	ENST00000585895	PPP1R42	Q7Z4L9	355 aa		33.15	■■■□□ 2.9
ARID3A-204	ENST00000585895	NLRP10	Q86W26	655 aa		33.15	■■■□□ 2.9
ARID3A-204	ENST00000585895	ARHGAP45	Q92619	1136 aa		33.15	■■■□□ 2.9
ARID3A-204	ENST00000585895	TPTE2	Q6XPS3	522 aa		33.14	■■■□□ 2.9
ARID3A-204	ENST00000585895	API5	Q9BZZ5	524 aa	Known RBP	33.14	■■■□□ 2.9
ARID3A-204	ENST00000585895	NYX	Q9GZU5	481 aa		33.14	■■■□□ 2.9
ARID3A-204	ENST00000585895	FAM177B	A6PVY3	158 aa		33.13	■■■□□ 2.89
ARID3A-204	ENST00000585895	NPHP1	O15259	732 aa		33.13	■■■□□ 2.89
ARID3A-204	ENST00000585895	SUSD4	Q5VX71	490 aa		33.13	■■■□□ 2.89
ARID3A-204	ENST00000585895	CNBD1	Q8NA66	436 aa		33.12	■■■□□ 2.89
ARID3A-204	ENST00000585895	FRAT1	Q92837	279 aa	Predicted RBP	33.12	■■■□□ 2.89
ARID3A-204	ENST00000585895	NUP98	P52948	1817 aa		33.12	■■■□□ 2.89
ARID3A-204	ENST00000585895	CCDC191	Q8NCU4	936 aa		33.11	■■■□□ 2.89
ARID3A-204	ENST00000585895	UTP14A	Q9BVJ6	771 aa	Known RBP	33.11	■■■□□ 2.89
ARID3A-204	ENST00000585895	IBTK	Q9P2D0	1353 aa	Predicted RBP	33.1	■■■□□ 2.89
ARID3A-204	ENST00000585895	IGKV5-2	P06315	115 aa		33.1	■■■□□ 2.89
ARID3A-204	ENST00000585895	SLC4A10	Q6U841	1118 aa		33.1	■■■□□ 2.89
ARID3A-204	ENST00000585895	LINS1	Q8NG48	757 aa		33.1	■■■□□ 2.89
ARID3A-204	ENST00000585895	ARFGEF2	Q9Y6D5	1785 aa		33.09	■■■□□ 2.89
ARID3A-204	ENST00000585895	GTF2E1	P29083	439 aa	Predicted RBP	33.09	■■■□□ 2.89
ARID3A-204	ENST00000585895	PRR5L	Q6MZQ0	368 aa		33.09	■■■□□ 2.89
ARID3A-204	ENST00000585895	CWC25	Q9NXE8	425 aa	Predicted RBP	33.09	■■■□□ 2.89
ARID3A-204	ENST00000585895	LRP5	O75197	1615 aa		33.09	■■■□□ 2.89
ARID3A-204	ENST00000585895	NTSR2	O95665	410 aa		33.08	■■■□□ 2.89
ARID3A-204	ENST00000585895	ST5	P78524	1137 aa		33.08	■■■□□ 2.89
ARID3A-204	ENST00000585895	BEND3	Q5T5X7	828 aa		33.08	■■■□□ 2.89
ARID3A-204	ENST00000585895	TRMT112	Q9UI30	125 aa	Known RBP	33.08	■■■□□ 2.89
ARID3A-204	ENST00000585895	RNF123	Q5XPI4	1314 aa		33.07	■■■□□ 2.88
ARID3A-204	ENST00000585895	NEURL1B	A8MQ27	555 aa		33.07	■■■□□ 2.88

Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms