RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 HACL1Q9UJ83 578 aa11.42□□□□□ -0.58
SRSF1-207ENST00000584668 CLEC11AQ9Y240 323 aa11.42□□□□□ -0.58
SRSF1-207ENST00000584668 HEG1Q9ULI3 1381 aa11.41□□□□□ -0.58
SRSF1-207ENST00000584668 CLSPNQ9HAW4 1339 aa11.41□□□□□ -0.58
SRSF1-207ENST00000584668 HMOX1P09601 288 aa11.41□□□□□ -0.58
SRSF1-207ENST00000584668 SRGNP10124 158 aa11.41□□□□□ -0.58
SRSF1-207ENST00000584668 FMNL2Q96PY5 1086 aa11.41□□□□□ -0.58
SRSF1-207ENST00000584668 TAF1DQ9H5J8 278 aaPredicted RBP11.41□□□□□ -0.58
SRSF1-207ENST00000584668 DIAPH1O60610 1272 aaKnown RBP11.4□□□□□ -0.58
SRSF1-207ENST00000584668 VEGFBP49765 207 aa11.4□□□□□ -0.58
SRSF1-207ENST00000584668 ZNF790Q6PG37 636 aa11.4□□□□□ -0.58
SRSF1-207ENST00000584668 NBPF5PQ86XG9 351 aaPredicted RBP11.4□□□□□ -0.58
SRSF1-207ENST00000584668 RTKN2Q8IZC4 609 aa11.4□□□□□ -0.58
SRSF1-207ENST00000584668 ABT1Q9ULW3 272 aaKnown RBP11.4□□□□□ -0.58
SRSF1-207ENST00000584668 TBC1D2BQ9UPU7 963 aa11.4□□□□□ -0.58
SRSF1-207ENST00000584668 ADAMTSL1Q8N6G6 1762 aa11.39□□□□□ -0.59
SRSF1-207ENST00000584668 GNAT3A8MTJ3 354 aa11.39□□□□□ -0.59
SRSF1-207ENST00000584668 SLC34A2O95436 690 aa11.39□□□□□ -0.59
SRSF1-207ENST00000584668 POTEIP0CG38 1075 aa11.39□□□□□ -0.59
SRSF1-207ENST00000584668 POTEJP0CG39 1038 aa11.39□□□□□ -0.59
SRSF1-207ENST00000584668 NPR1P16066 1061 aa11.39□□□□□ -0.59
SRSF1-207ENST00000584668 LMOD1P29536 600 aaPredicted RBP11.39□□□□□ -0.59
SRSF1-207ENST00000584668 EPHX2P34913 555 aa11.39□□□□□ -0.59
SRSF1-207ENST00000584668 ECE1P42892 770 aa11.39□□□□□ -0.59
SRSF1-207ENST00000584668 LBX1P52954 281 aa11.39□□□□□ -0.59
SRSF1-207ENST00000584668 FKBP4Q02790 459 aaKnown RBP eCLIP11.39□□□□□ -0.59
SRSF1-207ENST00000584668 MTHFSDQ2M296 383 aaKnown RBP11.39□□□□□ -0.59
SRSF1-207ENST00000584668 DEFB115Q30KQ5 88 aa11.39□□□□□ -0.59
SRSF1-207ENST00000584668 DZIP3Q86Y13 1208 aaKnown RBP11.39□□□□□ -0.59
SRSF1-207ENST00000584668 RASSF10A6NK89 507 aa11.38□□□□□ -0.59
SRSF1-207ENST00000584668 CLEC4GQ6UXB4 293 aa11.38□□□□□ -0.59
SRSF1-207ENST00000584668 JDP2Q8WYK2 163 aa11.38□□□□□ -0.59
SRSF1-207ENST00000584668 WBP1LQ9NX94 342 aa11.38□□□□□ -0.59
SRSF1-207ENST00000584668 THSD7BQ9C0I4 1608 aa11.38□□□□□ -0.59
SRSF1-207ENST00000584668 TRPM7Q96QT4 1865 aa11.38□□□□□ -0.59
SRSF1-207ENST00000584668 RGL2O15211 777 aa11.37□□□□□ -0.59
SRSF1-207ENST00000584668 ALDH1B1P30837 517 aa11.37□□□□□ -0.59
SRSF1-207ENST00000584668 TPTE2Q6XPS3 522 aa11.37□□□□□ -0.59
SRSF1-207ENST00000584668 PAXIP1Q6ZW49 1069 aaPredicted RBP11.37□□□□□ -0.59
SRSF1-207ENST00000584668 GPC2Q8N158 579 aa11.37□□□□□ -0.59
SRSF1-207ENST00000584668 CCDC24Q8N4L8 307 aa11.37□□□□□ -0.59
SRSF1-207ENST00000584668 ABHD8Q96I13 439 aa11.37□□□□□ -0.59
SRSF1-207ENST00000584668 ZNF496Q96IT1 587 aaPredicted RBP11.37□□□□□ -0.59
SRSF1-207ENST00000584668 WDR33Q9C0J8 1336 aaKnown RBP11.36□□□□□ -0.59
SRSF1-207ENST00000584668 CAMTA2O94983 1202 aa11.36□□□□□ -0.59
SRSF1-207ENST00000584668 HSPA5P11021 654 aaKnown RBP11.36□□□□□ -0.59
SRSF1-207ENST00000584668 GTF2E1P29083 439 aaPredicted RBP11.36□□□□□ -0.59
SRSF1-207ENST00000584668 IARSP41252 1262 aaKnown RBP11.36□□□□□ -0.59
SRSF1-207ENST00000584668 EIF6P56537 245 aaKnown RBP11.36□□□□□ -0.59
SRSF1-207ENST00000584668 FAM161AQ3B820 660 aa11.36□□□□□ -0.59
SRSF1-207ENST00000584668 GRIPAP1Q4V328 841 aa11.36□□□□□ -0.59
SRSF1-207ENST00000584668 CNTROBQ8N137 903 aa11.36□□□□□ -0.59
SRSF1-207ENST00000584668 RNF123Q5XPI4 1314 aa11.35□□□□□ -0.59
SRSF1-207ENST00000584668 ZNF541Q9H0D2 1346 aa11.35□□□□□ -0.59
SRSF1-207ENST00000584668 BTBD11A6QL63 1104 aa11.35□□□□□ -0.59
SRSF1-207ENST00000584668 ITGBL1O95965 494 aaPredicted RBP11.35□□□□□ -0.59
SRSF1-207ENST00000584668 HSPA8P11142 646 aaKnown RBP11.35□□□□□ -0.59
SRSF1-207ENST00000584668 MLLT1Q03111 559 aaPredicted RBP11.35□□□□□ -0.59
SRSF1-207ENST00000584668 TMX4Q9H1E5 349 aaPredicted RBP11.35□□□□□ -0.59
SRSF1-207ENST00000584668 ZNF277Q9NRM2 450 aaPredicted RBP11.35□□□□□ -0.59
SRSF1-207ENST00000584668 LAMB4A4D0S4 1761 aa11.35□□□□□ -0.59
SRSF1-207ENST00000584668 U2SURPO15042 1029 aaKnown RBP11.34□□□□□ -0.59
SRSF1-207ENST00000584668 TRIM26Q12899 539 aaPredicted RBP11.34□□□□□ -0.59
SRSF1-207ENST00000584668 CC2D2BQ6DHV5 1058 aa11.34□□□□□ -0.59
SRSF1-207ENST00000584668 NYXQ9GZU5 481 aa11.34□□□□□ -0.59
SRSF1-207ENST00000584668 PCDH10Q9P2E7 1040 aa11.34□□□□□ -0.59
SRSF1-207ENST00000584668 CCDC85CA6NKD9 419 aa11.33□□□□□ -0.6
SRSF1-207ENST00000584668 FZD9O00144 591 aa11.33□□□□□ -0.6
SRSF1-207ENST00000584668 CA12O43570 354 aa11.33□□□□□ -0.6
SRSF1-207ENST00000584668 A1BGP04217 495 aa11.33□□□□□ -0.6
SRSF1-207ENST00000584668 AMER1Q5JTC6 1135 aaPredicted RBP11.33□□□□□ -0.6
SRSF1-207ENST00000584668 MAP1SQ66K74 1059 aaPredicted RBP11.33□□□□□ -0.6
SRSF1-207ENST00000584668 RTF1Q92541 710 aaKnown RBP11.33□□□□□ -0.6
SRSF1-207ENST00000584668 PSMD1Q99460 953 aa11.33□□□□□ -0.6
SRSF1-207ENST00000584668 NIP7Q9Y221 180 aaKnown RBP eCLIP11.33□□□□□ -0.6
SRSF1-207ENST00000584668 CEMIPQ8WUJ3 1361 aa11.32□□□□□ -0.6
SRSF1-207ENST00000584668 SNRPA1P09661 255 aaKnown RBP11.32□□□□□ -0.6
SRSF1-207ENST00000584668 C7orf43Q8WVR3 580 aa11.32□□□□□ -0.6
SRSF1-207ENST00000584668 DDX21Q9NR30 783 aaKnown RBP eCLIP11.32□□□□□ -0.6
SRSF1-207ENST00000584668 GRM1Q13255 1194 aa11.31□□□□□ -0.6
SRSF1-207ENST00000584668 USP50Q70EL3 339 aaPredicted RBP11.31□□□□□ -0.6
SRSF1-207ENST00000584668 SYNE4Q8N205 404 aa11.31□□□□□ -0.6
SRSF1-207ENST00000584668 RPGRQ92834 1020 aaKnown RBP11.31□□□□□ -0.6
SRSF1-207ENST00000584668 CAPNS2Q96L46 248 aa11.31□□□□□ -0.6
SRSF1-207ENST00000584668 CFAP53Q96M91 514 aa11.31□□□□□ -0.6
SRSF1-207ENST00000584668 GJA3Q9Y6H8 435 aa11.31□□□□□ -0.6
SRSF1-207ENST00000584668 KLRG2A4D1S0 409 aaPredicted RBP11.3□□□□□ -0.6
SRSF1-207ENST00000584668 MAP2K2P36507 400 aa11.3□□□□□ -0.6
SRSF1-207ENST00000584668 LARGE2Q8N3Y3 721 aa11.3□□□□□ -0.6
SRSF1-207ENST00000584668 IL17REQ8NFR9 667 aa11.3□□□□□ -0.6
SRSF1-207ENST00000584668 CFAP44Q96MT7 982 aa11.3□□□□□ -0.6
SRSF1-207ENST00000584668 GPR101Q96P66 508 aaPredicted RBP11.3□□□□□ -0.6
SRSF1-207ENST00000584668 COL3A1P02461 1466 aaPredicted RBP11.3□□□□□ -0.6
SRSF1-207ENST00000584668 CC2D1BQ5T0F9 858 aaKnown RBP11.29□□□□□ -0.6
SRSF1-207ENST00000584668 NIM1KQ8IY84 436 aa11.29□□□□□ -0.6
SRSF1-207ENST00000584668 NUDCQ9Y266 331 aa11.29□□□□□ -0.6
SRSF1-207ENST00000584668 IBTKQ9P2D0 1353 aaPredicted RBP11.28□□□□□ -0.6
SRSF1-207ENST00000584668 NUP98P52948 1817 aa11.28□□□□□ -0.6
SRSF1-207ENST00000584668 RIC1Q4ADV7 1423 aa11.28□□□□□ -0.6
SRSF1-207ENST00000584668 FAM177BA6PVY3 158 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms