RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 CFAP44Q96MT7 982 aa12.95□□□□□ -0.34
SKA2-208ENST00000583927 BRIP1Q9BX63 1249 aa12.95□□□□□ -0.34
SKA2-208ENST00000583927 RRP7AQ9Y3A4 280 aaKnown RBP12.95□□□□□ -0.34
SKA2-208ENST00000583927 ZNF853P0CG23 659 aa12.94□□□□□ -0.34
SKA2-208ENST00000583927 PIP4K2AP48426 406 aaPredicted RBP12.94□□□□□ -0.34
SKA2-208ENST00000583927 CALD1Q05682 793 aaKnown RBP12.94□□□□□ -0.34
SKA2-208ENST00000583927 NEUROD2Q15784 382 aa12.94□□□□□ -0.34
SKA2-208ENST00000583927 BCS1LQ9Y276 419 aa12.94□□□□□ -0.34
SKA2-208ENST00000583927 ATP10DQ9P241 1426 aa12.94□□□□□ -0.34
SKA2-208ENST00000583927 APAF1O14727 1248 aa12.93□□□□□ -0.34
SKA2-208ENST00000583927 PDE6BP35913 854 aa12.93□□□□□ -0.34
SKA2-208ENST00000583927 DALRD3Q5D0E6 543 aaKnown RBP12.93□□□□□ -0.34
SKA2-208ENST00000583927 PRR5LQ6MZQ0 368 aa12.93□□□□□ -0.34
SKA2-208ENST00000583927 LRP10Q7Z4F1 713 aa12.93□□□□□ -0.34
SKA2-208ENST00000583927 MAP3K15Q6ZN16 1313 aa12.92□□□□□ -0.34
SKA2-208ENST00000583927 PDIA6Q15084 440 aa12.92□□□□□ -0.34
SKA2-208ENST00000583927 CCDC27Q2M243 656 aa12.92□□□□□ -0.34
SKA2-208ENST00000583927 CCDC184Q52MB2 194 aa12.92□□□□□ -0.34
SKA2-208ENST00000583927 BICDL1Q6ZP65 573 aa12.92□□□□□ -0.34
SKA2-208ENST00000583927 CNBD1Q8NA66 436 aa12.92□□□□□ -0.34
SKA2-208ENST00000583927 SLX4Q8IY92 1834 aa12.92□□□□□ -0.34
SKA2-208ENST00000583927 IBTKQ9P2D0 1353 aaPredicted RBP12.92□□□□□ -0.34
SKA2-208ENST00000583927 RIC1Q4ADV7 1423 aa12.91□□□□□ -0.34
SKA2-208ENST00000583927 KLRG2A4D1S0 409 aaPredicted RBP12.91□□□□□ -0.34
SKA2-208ENST00000583927 H0YIN7 160 aa12.91□□□□□ -0.34
SKA2-208ENST00000583927 CHRNA5P30532 468 aa12.91□□□□□ -0.34
SKA2-208ENST00000583927 IFT57Q9NWB7 429 aa12.91□□□□□ -0.34
SKA2-208ENST00000583927 GNAI1P63096 354 aa12.9□□□□□ -0.34
SKA2-208ENST00000583927 ST5P78524 1137 aa12.9□□□□□ -0.34
SKA2-208ENST00000583927 HLFQ16534 295 aa12.9□□□□□ -0.34
SKA2-208ENST00000583927 TPTE2Q6XPS3 522 aa12.9□□□□□ -0.34
SKA2-208ENST00000583927 KIF6Q6ZMV9 814 aa12.9□□□□□ -0.34
SKA2-208ENST00000583927 TTLL6Q8N841 843 aa12.9□□□□□ -0.34
SKA2-208ENST00000583927 NIP7Q9Y221 180 aaKnown RBP eCLIP12.9□□□□□ -0.34
SKA2-208ENST00000583927 GIGYF2Q6Y7W6 1299 aaKnown RBP12.89□□□□□ -0.35
SKA2-208ENST00000583927 TTLL7Q6ZT98 887 aa12.89□□□□□ -0.35
SKA2-208ENST00000583927 NBPF5PQ86XG9 351 aaPredicted RBP12.89□□□□□ -0.35
SKA2-208ENST00000583927 C2CD5Q86YS7 1000 aa12.89□□□□□ -0.35
SKA2-208ENST00000583927 NYXQ9GZU5 481 aa12.89□□□□□ -0.35
SKA2-208ENST00000583927 MRS2Q9HD23 443 aa12.89□□□□□ -0.35
SKA2-208ENST00000583927 DDX21Q9NR30 783 aaKnown RBP eCLIP12.89□□□□□ -0.35
SKA2-208ENST00000583927 MBIPQ9NS73 344 aa12.89□□□□□ -0.35
SKA2-208ENST00000583927 MYL6BP14649 208 aa12.88□□□□□ -0.35
SKA2-208ENST00000583927 EIF2S2P20042 333 aaKnown RBP12.88□□□□□ -0.35
SKA2-208ENST00000583927 STYK1Q6J9G0 422 aa12.88□□□□□ -0.35
SKA2-208ENST00000583927 ZNF34Q8IZ26 560 aa12.88□□□□□ -0.35
SKA2-208ENST00000583927 CHMP4AQ9BY43 222 aa12.88□□□□□ -0.35
SKA2-208ENST00000583927 WWC3Q9ULE0 1092 aa12.88□□□□□ -0.35
SKA2-208ENST00000583927 LAMB2P55268 1798 aa12.88□□□□□ -0.35
SKA2-208ENST00000583927 TNRC6CQ9HCJ0 1690 aaKnown RBP12.87□□□□□ -0.35
SKA2-208ENST00000583927 SRGNP10124 158 aa12.87□□□□□ -0.35
SKA2-208ENST00000583927 ARHGAP27Q6ZUM4 889 aa12.87□□□□□ -0.35
SKA2-208ENST00000583927 NGEFQ8N5V2 710 aa12.87□□□□□ -0.35
SKA2-208ENST00000583927 CNKSR1Q969H4 720 aa12.87□□□□□ -0.35
SKA2-208ENST00000583927 MASTLQ96GX5 879 aa12.87□□□□□ -0.35
SKA2-208ENST00000583927 LAS1LQ9Y4W2 734 aaKnown RBP12.87□□□□□ -0.35
SKA2-208ENST00000583927 IL16Q14005 1332 aa12.87□□□□□ -0.35
SKA2-208ENST00000583927 ZC3H4Q9UPT8 1303 aaKnown RBP12.87□□□□□ -0.35
SKA2-208ENST00000583927 TIAM2Q8IVF5 1701 aa12.86□□□□□ -0.35
SKA2-208ENST00000583927 NPHP1O15259 732 aa12.86□□□□□ -0.35
SKA2-208ENST00000583927 KRT24Q2M2I5 525 aa12.86□□□□□ -0.35
SKA2-208ENST00000583927 PROSER3Q2NL68 480 aa12.86□□□□□ -0.35
SKA2-208ENST00000583927 PARP10Q53GL7 1025 aa12.86□□□□□ -0.35
SKA2-208ENST00000583927 DBF4Q9UBU7 674 aaPredicted RBP12.86□□□□□ -0.35
SKA2-208ENST00000583927 RNF123Q5XPI4 1314 aa12.86□□□□□ -0.35
SKA2-208ENST00000583927 HSP90AB3PQ58FF7 597 aa12.85□□□□□ -0.35
SKA2-208ENST00000583927 HDGFL1Q5TGJ6 251 aa12.85□□□□□ -0.35
SKA2-208ENST00000583927 DUSP27Q5VZP5 1158 aa12.85□□□□□ -0.35
SKA2-208ENST00000583927 WWC1Q8IX03 1113 aa12.85□□□□□ -0.35
SKA2-208ENST00000583927 ZBTB3Q9H5J0 574 aa12.85□□□□□ -0.35
SKA2-208ENST00000583927 UBN2Q6ZU65 1347 aa12.85□□□□□ -0.35
SKA2-208ENST00000583927 NPR1P16066 1061 aa12.84□□□□□ -0.35
SKA2-208ENST00000583927 CRY2Q49AN0 593 aa12.84□□□□□ -0.35
SKA2-208ENST00000583927 SOGA3Q5TF21 947 aa12.84□□□□□ -0.35
SKA2-208ENST00000583927 COPS6Q7L5N1 327 aa12.84□□□□□ -0.35
SKA2-208ENST00000583927 PPP1R42Q7Z4L9 355 aa12.84□□□□□ -0.35
SKA2-208ENST00000583927 ZNF622Q969S3 477 aaKnown RBP eCLIP12.84□□□□□ -0.35
SKA2-208ENST00000583927 HYPKQ9NX55 129 aa12.84□□□□□ -0.35
SKA2-208ENST00000583927 CHPF2Q9P2E5 772 aa12.84□□□□□ -0.35
SKA2-208ENST00000583927 DDX60Q8IY21 1712 aaKnown RBP12.84□□□□□ -0.35
SKA2-208ENST00000583927 LTBP3Q9NS15 1303 aa12.84□□□□□ -0.35
SKA2-208ENST00000583927 CEP350Q5VT06 3117 aa12.84□□□□□ -0.35
SKA2-208ENST00000583927 NTSR2O95665 410 aa12.83□□□□□ -0.36
SKA2-208ENST00000583927 ANXA1P04083 346 aa12.83□□□□□ -0.36
SKA2-208ENST00000583927 CCDC24Q8N4L8 307 aa12.83□□□□□ -0.36
SKA2-208ENST00000583927 XAGE3Q8WTP9 111 aa12.83□□□□□ -0.36
SKA2-208ENST00000583927 LMNB1P20700 586 aa12.82□□□□□ -0.36
SKA2-208ENST00000583927 GTF2E1P29083 439 aaPredicted RBP12.82□□□□□ -0.36
SKA2-208ENST00000583927 ALDH1B1P30837 517 aa12.82□□□□□ -0.36
SKA2-208ENST00000583927 HOXA10P31260 410 aaPredicted RBP12.82□□□□□ -0.36
SKA2-208ENST00000583927 TCIRG1Q13488 830 aa12.82□□□□□ -0.36
SKA2-208ENST00000583927 SLC10A5Q5PT55 438 aa12.82□□□□□ -0.36
SKA2-208ENST00000583927 SUSD4Q5VX71 490 aa12.82□□□□□ -0.36
SKA2-208ENST00000583927 C9orf131Q5VYM1 1079 aa12.82□□□□□ -0.36
SKA2-208ENST00000583927 PRPF40BQ6NWY9 871 aaKnown RBP12.82□□□□□ -0.36
SKA2-208ENST00000583927 WDR63Q8IWG1 891 aa12.82□□□□□ -0.36
SKA2-208ENST00000583927 PLBD2Q8NHP8 589 aa12.82□□□□□ -0.36
SKA2-208ENST00000583927 C7orf43Q8WVR3 580 aa12.82□□□□□ -0.36
SKA2-208ENST00000583927 GPBP1L1Q9HC44 474 aaPredicted RBP12.82□□□□□ -0.36
SKA2-208ENST00000583927 ABCC12Q96J65 1359 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms