RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 SSFA2P28290 1259 aa17.38■□□□□ 0.37
ITGB4-209ENST00000583327 ARHGEF1Q92888 912 aaKnown RBP17.38■□□□□ 0.37
ITGB4-209ENST00000583327 AK7Q96M32 723 aa17.38■□□□□ 0.37
ITGB4-209ENST00000583327 MAP3K15Q6ZN16 1313 aa17.38■□□□□ 0.37
ITGB4-209ENST00000583327 COL15A1P39059 1388 aa17.38■□□□□ 0.37
ITGB4-209ENST00000583327 IBTKQ9P2D0 1353 aaPredicted RBP17.38■□□□□ 0.37
ITGB4-209ENST00000583327 CAMTA2O94983 1202 aa17.37■□□□□ 0.37
ITGB4-209ENST00000583327 DZIP3Q86Y13 1208 aaKnown RBP17.37■□□□□ 0.37
ITGB4-209ENST00000583327 DNAAF4Q8WXU2 420 aa17.37■□□□□ 0.37
ITGB4-209ENST00000583327 METTL22Q9BUU2 404 aaPredicted RBP17.37■□□□□ 0.37
ITGB4-209ENST00000583327 MAP3K2Q9Y2U5 619 aa17.37■□□□□ 0.37
ITGB4-209ENST00000583327 UBR3Q6ZT12 1888 aa17.37■□□□□ 0.37
ITGB4-209ENST00000583327 NUP188Q5SRE5 1749 aa17.36■□□□□ 0.37
ITGB4-209ENST00000583327 SLC15A2Q16348 729 aa17.36■□□□□ 0.37
ITGB4-209ENST00000583327 TRAPPC3LQ5T215 181 aa17.36■□□□□ 0.37
ITGB4-209ENST00000583327 BEND3Q5T5X7 828 aa17.36■□□□□ 0.37
ITGB4-209ENST00000583327 GIGYF2Q6Y7W6 1299 aaKnown RBP17.36■□□□□ 0.37
ITGB4-209ENST00000583327 SMIM5Q71RC9 77 aa17.36■□□□□ 0.37
ITGB4-209ENST00000583327 ANO8Q9HCE9 1232 aaPredicted RBP17.36■□□□□ 0.37
ITGB4-209ENST00000583327 NARFQ9UHQ1 456 aa17.36■□□□□ 0.37
ITGB4-209ENST00000583327 TBC1D2BQ9UPU7 963 aa17.36■□□□□ 0.37
ITGB4-209ENST00000583327 ATP10DQ9P241 1426 aa17.36■□□□□ 0.37
ITGB4-209ENST00000583327 PXDNLA1KZ92 1463 aa17.36■□□□□ 0.37
ITGB4-209ENST00000583327 TRIM28Q13263 835 aaKnown RBP17.35■□□□□ 0.37
ITGB4-209ENST00000583327 RIC3Q7Z5B4 369 aa17.35■□□□□ 0.37
ITGB4-209ENST00000583327 PANK1Q8TE04 598 aa17.35■□□□□ 0.37
ITGB4-209ENST00000583327 CLUAP1Q96AJ1 413 aa17.35■□□□□ 0.37
ITGB4-209ENST00000583327 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.34■□□□□ 0.37
ITGB4-209ENST00000583327 IGKV5-2P06315 115 aa17.34■□□□□ 0.37
ITGB4-209ENST00000583327 TCIRG1Q13488 830 aa17.34■□□□□ 0.37
ITGB4-209ENST00000583327 HLFQ16534 295 aa17.34■□□□□ 0.37
ITGB4-209ENST00000583327 CLEC4GQ6UXB4 293 aa17.34■□□□□ 0.37
ITGB4-209ENST00000583327 KIF6Q6ZMV9 814 aa17.34■□□□□ 0.37
ITGB4-209ENST00000583327 TMEM57Q8N5G2 664 aa17.34■□□□□ 0.37
ITGB4-209ENST00000583327 ISCA1Q9BUE6 129 aa17.34■□□□□ 0.37
ITGB4-209ENST00000583327 BCL2L12Q9HB09 334 aa17.34■□□□□ 0.37
ITGB4-209ENST00000583327 CCT4P50991 539 aaKnown RBP17.33■□□□□ 0.36
ITGB4-209ENST00000583327 FLAD1Q8NFF5 587 aa17.33■□□□□ 0.36
ITGB4-209ENST00000583327 LINS1Q8NG48 757 aa17.33■□□□□ 0.36
ITGB4-209ENST00000583327 ZBTB3Q9H5J0 574 aa17.33■□□□□ 0.36
ITGB4-209ENST00000583327 USP42Q9H9J4 1324 aaKnown RBP17.32■□□□□ 0.36
ITGB4-209ENST00000583327 ZBTB7BO15156 539 aaPredicted RBP17.32■□□□□ 0.36
ITGB4-209ENST00000583327 ALDH1L1O75891 902 aa17.32■□□□□ 0.36
ITGB4-209ENST00000583327 NPM2Q86SE8 214 aaKnown RBP17.32■□□□□ 0.36
ITGB4-209ENST00000583327 COL23A1Q86Y22 540 aaPredicted RBP17.32■□□□□ 0.36
ITGB4-209ENST00000583327 ZNF34Q8IZ26 560 aa17.32■□□□□ 0.36
ITGB4-209ENST00000583327 TFCP2L1Q9NZI6 479 aa17.32■□□□□ 0.36
ITGB4-209ENST00000583327 ZNF330Q9Y3S2 320 aaPredicted RBP17.32■□□□□ 0.36
ITGB4-209ENST00000583327 ARFGEF2Q9Y6D5 1785 aa17.31■□□□□ 0.36
ITGB4-209ENST00000583327 PNPLA7Q6ZV29 1317 aa17.31■□□□□ 0.36
ITGB4-209ENST00000583327 MVPQ14764 893 aaKnown RBP17.31■□□□□ 0.36
ITGB4-209ENST00000583327 FTSJ3Q8IY81 847 aaKnown RBP17.31■□□□□ 0.36
ITGB4-209ENST00000583327 STK32BQ9NY57 414 aa17.31■□□□□ 0.36
ITGB4-209ENST00000583327 QSER1Q2KHR3 1735 aa17.3■□□□□ 0.36
ITGB4-209ENST00000583327 NEURL1BA8MQ27 555 aa17.3■□□□□ 0.36
ITGB4-209ENST00000583327 RFC4P35249 363 aa17.3■□□□□ 0.36
ITGB4-209ENST00000583327 HSP90AB3PQ58FF7 597 aa17.3■□□□□ 0.36
ITGB4-209ENST00000583327 SLC4A10Q6U841 1118 aa17.3■□□□□ 0.36
ITGB4-209ENST00000583327 MYD88Q99836 296 aa17.3■□□□□ 0.36
ITGB4-209ENST00000583327 SRCIN1Q9C0H9 1055 aa17.3■□□□□ 0.36
ITGB4-209ENST00000583327 COG6Q9Y2V7 657 aa17.3■□□□□ 0.36
ITGB4-209ENST00000583327 BCORQ6W2J9 1755 aa17.3■□□□□ 0.36
ITGB4-209ENST00000583327 N4BP2Q86UW6 1770 aaPredicted RBP17.3■□□□□ 0.36
ITGB4-209ENST00000583327 C4AP0C0L4 1744 aa17.3■□□□□ 0.36
ITGB4-209ENST00000583327 USPL1Q5W0Q7 1092 aa17.29■□□□□ 0.36
ITGB4-209ENST00000583327 CRBNQ96SW2 442 aa17.29■□□□□ 0.36
ITGB4-209ENST00000583327 SRP68Q9UHB9 627 aaKnown RBP17.29■□□□□ 0.36
ITGB4-209ENST00000583327 TUBGCP6Q96RT7 1819 aa17.28■□□□□ 0.36
ITGB4-209ENST00000583327 UTYO14607 1347 aa17.28■□□□□ 0.36
ITGB4-209ENST00000583327 ZPR1O75312 459 aa17.28■□□□□ 0.36
ITGB4-209ENST00000583327 PHF14O94880 888 aa17.28■□□□□ 0.36
ITGB4-209ENST00000583327 GYS1P13807 737 aa17.28■□□□□ 0.36
ITGB4-209ENST00000583327 NEXNQ0ZGT2 675 aa17.28■□□□□ 0.36
ITGB4-209ENST00000583327 CWF19L2Q2TBE0 894 aaKnown RBP17.28■□□□□ 0.36
ITGB4-209ENST00000583327 CCDC191Q8NCU4 936 aa17.28■□□□□ 0.36
ITGB4-209ENST00000583327 ARXQ96QS3 562 aa17.28■□□□□ 0.36
ITGB4-209ENST00000583327 USP44Q9H0E7 712 aa17.28■□□□□ 0.36
ITGB4-209ENST00000583327 DDX19BQ9UMR2 479 aa17.28■□□□□ 0.36
ITGB4-209ENST00000583327 SCN7AQ01118 1682 aa17.28■□□□□ 0.36
ITGB4-209ENST00000583327 NUP98P52948 1817 aa17.27■□□□□ 0.36
ITGB4-209ENST00000583327 ATP5J2-PTCD1G3V325 749 aa17.27■□□□□ 0.36
ITGB4-209ENST00000583327 TM4SF1P30408 202 aa17.27■□□□□ 0.36
ITGB4-209ENST00000583327 GCKRQ14397 625 aa17.27■□□□□ 0.36
ITGB4-209ENST00000583327 ZBTB40Q9NUA8 1239 aa17.27■□□□□ 0.36
ITGB4-209ENST00000583327 ZNF652Q9Y2D9 606 aa17.27■□□□□ 0.36
ITGB4-209ENST00000583327 H7C1W4 665 aa17.26■□□□□ 0.35
ITGB4-209ENST00000583327 CASP7P55210 303 aa17.26■□□□□ 0.35
ITGB4-209ENST00000583327 IRX6P78412 446 aaPredicted RBP17.26■□□□□ 0.35
ITGB4-209ENST00000583327 AAMPQ13685 434 aa17.26■□□□□ 0.35
ITGB4-209ENST00000583327 NLRP10Q86W26 655 aa17.26■□□□□ 0.35
ITGB4-209ENST00000583327 EXOC6Q8TAG9 804 aa17.26■□□□□ 0.35
ITGB4-209ENST00000583327 UBN2Q6ZU65 1347 aa17.25■□□□□ 0.35
ITGB4-209ENST00000583327 FKBP8Q14318 412 aa17.25■□□□□ 0.35
ITGB4-209ENST00000583327 ERICH6BQ5W0A0 696 aa17.25■□□□□ 0.35
ITGB4-209ENST00000583327 TBC1D9BQ66K14 1250 aa17.25■□□□□ 0.35
ITGB4-209ENST00000583327 ITPRIPQ8IWB1 547 aa17.25■□□□□ 0.35
ITGB4-209ENST00000583327 PARP10Q53GL7 1025 aa17.24■□□□□ 0.35
ITGB4-209ENST00000583327 MEIS3Q99687 375 aa17.24■□□□□ 0.35
ITGB4-209ENST00000583327 CWC25Q9NXE8 425 aaPredicted RBP17.24■□□□□ 0.35
ITGB4-209ENST00000583327 ANKRD36CQ5JPF3 1778 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms