RNA–Protein interactions for RNA: ENST00000583092.1

PPP4R1-224, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-224ENST00000583092 KIF6Q6ZMV9 814 aa13.52□□□□□ -0.25
PPP4R1-224ENST00000583092 NGEFQ8N5V2 710 aa13.52□□□□□ -0.25
PPP4R1-224ENST00000583092 NYXQ9GZU5 481 aa13.52□□□□□ -0.25
PPP4R1-224ENST00000583092 MIS18AQ9NYP9 233 aa13.52□□□□□ -0.25
PPP4R1-224ENST00000583092 KIAA1551Q9HCM1 1747 aa13.52□□□□□ -0.25
PPP4R1-224ENST00000583092 FAM177BA6PVY3 158 aa13.51□□□□□ -0.25
PPP4R1-224ENST00000583092 RALBP1Q15311 655 aa13.51□□□□□ -0.25
PPP4R1-224ENST00000583092 NFE2L2Q16236 605 aa13.51□□□□□ -0.25
PPP4R1-224ENST00000583092 IFFO2Q5TF58 517 aa13.51□□□□□ -0.25
PPP4R1-224ENST00000583092 TMX4Q9H1E5 349 aaPredicted RBP13.51□□□□□ -0.25
PPP4R1-224ENST00000583092 PRAMEF22A3QJZ6 481 aa13.5□□□□□ -0.25
PPP4R1-224ENST00000583092 NFKBIEO00221 500 aa13.5□□□□□ -0.25
PPP4R1-224ENST00000583092 LMOD3Q0VAK6 560 aa13.5□□□□□ -0.25
PPP4R1-224ENST00000583092 CCDC93Q567U6 631 aa13.5□□□□□ -0.25
PPP4R1-224ENST00000583092 PRPF40BQ6NWY9 871 aaKnown RBP13.5□□□□□ -0.25
PPP4R1-224ENST00000583092 RTKN2Q8IZC4 609 aa13.5□□□□□ -0.25
PPP4R1-224ENST00000583092 RRP7AQ9Y3A4 280 aaKnown RBP13.5□□□□□ -0.25
PPP4R1-224ENST00000583092 BRCA1P38398 1863 aaKnown RBP13.5□□□□□ -0.25
PPP4R1-224ENST00000583092 VIRMAQ69YN4 1812 aaKnown RBP13.5□□□□□ -0.25
PPP4R1-224ENST00000583092 UBR2Q8IWV8 1755 aa13.5□□□□□ -0.25
PPP4R1-224ENST00000583092 LTBP3Q9NS15 1303 aa13.49□□□□□ -0.25
PPP4R1-224ENST00000583092 ERVV-1B6SEH8 477 aa13.49□□□□□ -0.25
PPP4R1-224ENST00000583092 IQCA1LA6NCM1 817 aa13.48□□□□□ -0.25
PPP4R1-224ENST00000583092 NBPF26B4DH59 902 aa13.48□□□□□ -0.25
PPP4R1-224ENST00000583092 NBPF10Q6P3W6 841 aaKnown RBP13.48□□□□□ -0.25
PPP4R1-224ENST00000583092 NBPF15Q8N660 670 aa13.48□□□□□ -0.25
PPP4R1-224ENST00000583092 KLRG1Q96E93 195 aa13.48□□□□□ -0.25
PPP4R1-224ENST00000583092 AFDNP55196 1824 aaKnown RBP13.48□□□□□ -0.25
PPP4R1-224ENST00000583092 MYL6BP14649 208 aa13.47□□□□□ -0.25
PPP4R1-224ENST00000583092 RIPK4P57078 832 aa13.47□□□□□ -0.25
PPP4R1-224ENST00000583092 EIF4A1P60842 406 aaKnown RBP13.47□□□□□ -0.25
PPP4R1-224ENST00000583092 DNAJC5GQ8N7S2 189 aa13.47□□□□□ -0.25
PPP4R1-224ENST00000583092 RPGRQ92834 1020 aaKnown RBP13.47□□□□□ -0.25
PPP4R1-224ENST00000583092 TSPYL4Q9UJ04 414 aa13.47□□□□□ -0.25
PPP4R1-224ENST00000583092 NRXN2Q9P2S2 1712 aa13.47□□□□□ -0.25
PPP4R1-224ENST00000583092 GRIPAP1Q4V328 841 aa13.46□□□□□ -0.25
PPP4R1-224ENST00000583092 CC2D2BQ6DHV5 1058 aa13.46□□□□□ -0.25
PPP4R1-224ENST00000583092 PPP1R42Q7Z4L9 355 aa13.46□□□□□ -0.25
PPP4R1-224ENST00000583092 PLEKHF1Q96S99 279 aa13.46□□□□□ -0.25
PPP4R1-224ENST00000583092 BABAM1Q9NWV8 329 aa13.46□□□□□ -0.25
PPP4R1-224ENST00000583092 ERBB4Q15303 1308 aa13.45□□□□□ -0.26
PPP4R1-224ENST00000583092 MAP3K15Q6ZN16 1313 aa13.45□□□□□ -0.26
PPP4R1-224ENST00000583092 KLRG2A4D1S0 409 aaPredicted RBP13.45□□□□□ -0.26
PPP4R1-224ENST00000583092 FKBP4Q02790 459 aaKnown RBP eCLIP13.45□□□□□ -0.26
PPP4R1-224ENST00000583092 HLFQ16534 295 aa13.45□□□□□ -0.26
PPP4R1-224ENST00000583092 JDP2Q8WYK2 163 aa13.45□□□□□ -0.26
PPP4R1-224ENST00000583092 DDNO94850 711 aaPredicted RBP13.44□□□□□ -0.26
PPP4R1-224ENST00000583092 EIF2S2P20042 333 aaKnown RBP13.44□□□□□ -0.26
PPP4R1-224ENST00000583092 PRELPP51888 382 aa13.44□□□□□ -0.26
PPP4R1-224ENST00000583092 WDR43Q15061 677 aaKnown RBP eCLIP13.44□□□□□ -0.26
PPP4R1-224ENST00000583092 PARP10Q53GL7 1025 aa13.44□□□□□ -0.26
PPP4R1-224ENST00000583092 CHADLQ6NUI6 762 aa13.44□□□□□ -0.26
PPP4R1-224ENST00000583092 RBM17Q96I25 401 aaKnown RBP13.44□□□□□ -0.26
PPP4R1-224ENST00000583092 SBF1O95248 1867 aa13.44□□□□□ -0.26
PPP4R1-224ENST00000583092 THUMPD2Q9BTF0 503 aaKnown RBP13.43□□□□□ -0.26
PPP4R1-224ENST00000583092 ZBTB3Q9H5J0 574 aa13.43□□□□□ -0.26
PPP4R1-224ENST00000583092 SIPA1L3O60292 1781 aaPredicted RBP13.43□□□□□ -0.26
PPP4R1-224ENST00000583092 GPTP24298 496 aa13.42□□□□□ -0.26
PPP4R1-224ENST00000583092 HTRA3P83110 453 aa13.42□□□□□ -0.26
PPP4R1-224ENST00000583092 DDX10Q13206 875 aaKnown RBP13.42□□□□□ -0.26
PPP4R1-224ENST00000583092 HSP90AB3PQ58FF7 597 aa13.42□□□□□ -0.26
PPP4R1-224ENST00000583092 GIGYF2Q6Y7W6 1299 aaKnown RBP13.42□□□□□ -0.26
PPP4R1-224ENST00000583092 SYNE4Q8N205 404 aa13.42□□□□□ -0.26
PPP4R1-224ENST00000583092 C7orf43Q8WVR3 580 aa13.42□□□□□ -0.26
PPP4R1-224ENST00000583092 NLRP3Q96P20 1036 aa13.42□□□□□ -0.26
PPP4R1-224ENST00000583092 ZNF277Q9NRM2 450 aaPredicted RBP13.42□□□□□ -0.26
PPP4R1-224ENST00000583092 CLEC11AQ9Y240 323 aa13.42□□□□□ -0.26
PPP4R1-224ENST00000583092 SCN7AQ01118 1682 aa13.41□□□□□ -0.26
PPP4R1-224ENST00000583092 TNRC6CQ9HCJ0 1690 aaKnown RBP13.41□□□□□ -0.26
PPP4R1-224ENST00000583092 IARSP41252 1262 aaKnown RBP13.41□□□□□ -0.26
PPP4R1-224ENST00000583092 EIF6P56537 245 aaKnown RBP13.41□□□□□ -0.26
PPP4R1-224ENST00000583092 NEUROD2Q15784 382 aa13.41□□□□□ -0.26
PPP4R1-224ENST00000583092 TTLL7Q6ZT98 887 aa13.41□□□□□ -0.26
PPP4R1-224ENST00000583092 NUTM1Q86Y26 1132 aa13.41□□□□□ -0.26
PPP4R1-224ENST00000583092 JMYQ8N9B5 988 aa13.41□□□□□ -0.26
PPP4R1-224ENST00000583092 POTECB2RU33 542 aa13.4□□□□□ -0.26
PPP4R1-224ENST00000583092 TMPOP42166 694 aaKnown RBP13.4□□□□□ -0.26
PPP4R1-224ENST00000583092 EAPPQ56P03 285 aaPredicted RBP13.4□□□□□ -0.26
PPP4R1-224ENST00000583092 PNMA8AQ86V59 439 aaPredicted RBP13.4□□□□□ -0.26
PPP4R1-224ENST00000583092 LDHDQ86WU2 507 aa13.4□□□□□ -0.26
PPP4R1-224ENST00000583092 PSMD1Q99460 953 aa13.4□□□□□ -0.26
PPP4R1-224ENST00000583092 UTP14AQ9BVJ6 771 aaKnown RBP13.4□□□□□ -0.26
PPP4R1-224ENST00000583092 HACL1Q9UJ83 578 aa13.4□□□□□ -0.26
PPP4R1-224ENST00000583092 LAS1LQ9Y4W2 734 aaKnown RBP13.4□□□□□ -0.26
PPP4R1-224ENST00000583092 CEP350Q5VT06 3117 aa13.4□□□□□ -0.26
PPP4R1-224ENST00000583092 DLEC1Q9Y238 1755 aa13.4□□□□□ -0.26
PPP4R1-224ENST00000583092 MYBBP1AQ9BQG0 1328 aaKnown RBP13.39□□□□□ -0.27
PPP4R1-224ENST00000583092 LMOD1P29536 600 aaPredicted RBP13.39□□□□□ -0.27
PPP4R1-224ENST00000583092 CRY2Q49AN0 593 aa13.39□□□□□ -0.27
PPP4R1-224ENST00000583092 SUSD4Q5VX71 490 aa13.39□□□□□ -0.27
PPP4R1-224ENST00000583092 L3MBTL3Q96JM7 780 aaPredicted RBP13.39□□□□□ -0.27
PPP4R1-224ENST00000583092 CRAMP1Q96RY5 1269 aa13.39□□□□□ -0.27
PPP4R1-224ENST00000583092 HOXA10P31260 410 aaPredicted RBP13.38□□□□□ -0.27
PPP4R1-224ENST00000583092 AIMP1Q12904 312 aaKnown RBP13.38□□□□□ -0.27
PPP4R1-224ENST00000583092 ZNF34Q8IZ26 560 aa13.38□□□□□ -0.27
PPP4R1-224ENST00000583092 LARGE2Q8N3Y3 721 aa13.38□□□□□ -0.27
PPP4R1-224ENST00000583092 SUPT20HQ8NEM7 779 aa13.38□□□□□ -0.27
PPP4R1-224ENST00000583092 RUNDC1Q96C34 613 aa13.38□□□□□ -0.27
PPP4R1-224ENST00000583092 TAF1DQ9H5J8 278 aaPredicted RBP13.38□□□□□ -0.27
PPP4R1-224ENST00000583092 CREBZFQ9NS37 354 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms