RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 EXOC6BQ9Y2D4 811 aa27.95■■■□□ 2.07
CCDC47-204ENST00000582252 KCPQ6ZWJ8 1503 aa27.95■■■□□ 2.06
CCDC47-204ENST00000582252 POLA2Q14181 598 aa27.93■■■□□ 2.06
CCDC47-204ENST00000582252 LINS1Q8NG48 757 aa27.93■■■□□ 2.06
CCDC47-204ENST00000582252 HSP90AB4PQ58FF6 505 aa27.92■■■□□ 2.06
CCDC47-204ENST00000582252 RTL5Q5HYW3 569 aaPredicted RBP27.92■■■□□ 2.06
CCDC47-204ENST00000582252 SEPT12Q8IYM1 358 aa27.92■■■□□ 2.06
CCDC47-204ENST00000582252 SYTL4Q96C24 671 aaPredicted RBP27.92■■■□□ 2.06
CCDC47-204ENST00000582252 C9orf78Q9NZ63 289 aaPredicted RBP27.92■■■□□ 2.06
CCDC47-204ENST00000582252 PRIM1P49642 420 aaKnown RBP27.92■■■□□ 2.06
CCDC47-204ENST00000582252 PDIA6Q15084 440 aa27.92■■■□□ 2.06
CCDC47-204ENST00000582252 BRWD3Q6RI45 1802 aa27.91■■■□□ 2.06
CCDC47-204ENST00000582252 RBM6P78332 1123 aaKnown RBP27.91■■■□□ 2.06
CCDC47-204ENST00000582252 NBR1Q14596 966 aa27.91■■■□□ 2.06
CCDC47-204ENST00000582252 PPP1R42Q7Z4L9 355 aa27.91■■■□□ 2.06
CCDC47-204ENST00000582252 BCL11AQ9H165 835 aa27.91■■■□□ 2.06
CCDC47-204ENST00000582252 NBPF7P0C2Y1 421 aaPredicted RBP27.9■■■□□ 2.06
CCDC47-204ENST00000582252 PDE1AP54750 535 aa27.9■■■□□ 2.06
CCDC47-204ENST00000582252 OTUD7AQ8TE49 926 aaPredicted RBP27.9■■■□□ 2.06
CCDC47-204ENST00000582252 NEXNQ0ZGT2 675 aa27.89■■■□□ 2.06
CCDC47-204ENST00000582252 RIC3Q7Z5B4 369 aa27.89■■■□□ 2.06
CCDC47-204ENST00000582252 SBF2Q86WG5 1849 aa27.89■■■□□ 2.06
CCDC47-204ENST00000582252 ERBB4Q15303 1308 aa27.89■■■□□ 2.05
CCDC47-204ENST00000582252 SRGAP3O43295 1099 aa27.89■■■□□ 2.05
CCDC47-204ENST00000582252 MTX1Q13505 466 aa27.88■■■□□ 2.05
CCDC47-204ENST00000582252 ATG3Q9NT62 314 aa27.88■■■□□ 2.05
CCDC47-204ENST00000582252 NHSQ6T4R5 1651 aa27.88■■■□□ 2.05
CCDC47-204ENST00000582252 AOX1Q06278 1338 aa27.87■■■□□ 2.05
CCDC47-204ENST00000582252 SDSP20132 328 aa27.87■■■□□ 2.05
CCDC47-204ENST00000582252 AIMP1Q12904 312 aaKnown RBP27.87■■■□□ 2.05
CCDC47-204ENST00000582252 ACSBG1Q96GR2 724 aa27.87■■■□□ 2.05
CCDC47-204ENST00000582252 ASAP1Q9ULH1 1129 aa27.87■■■□□ 2.05
CCDC47-204ENST00000582252 SALL3Q9BXA9 1300 aa27.87■■■□□ 2.05
CCDC47-204ENST00000582252 SURF6O75683 361 aaKnown RBP27.86■■■□□ 2.05
CCDC47-204ENST00000582252 MYL6BP14649 208 aa27.86■■■□□ 2.05
CCDC47-204ENST00000582252 MX1P20591 662 aa27.86■■■□□ 2.05
CCDC47-204ENST00000582252 UTYO14607 1347 aa27.85■■■□□ 2.05
CCDC47-204ENST00000582252 KIF1BPQ96EK5 621 aa27.85■■■□□ 2.05
CCDC47-204ENST00000582252 TBC1D2Q9BYX2 928 aa27.85■■■□□ 2.05
CCDC47-204ENST00000582252 TUBGCP6Q96RT7 1819 aa27.85■■■□□ 2.05
CCDC47-204ENST00000582252 GRM8O00222 908 aa27.84■■■□□ 2.05
CCDC47-204ENST00000582252 PTCD1O75127 700 aaKnown RBP27.84■■■□□ 2.05
CCDC47-204ENST00000582252 XAGE3Q8WTP9 111 aa27.84■■■□□ 2.05
CCDC47-204ENST00000582252 VSIG10Q8N0Z9 540 aa27.84■■■□□ 2.05
CCDC47-204ENST00000582252 STAP2Q9UGK3 403 aa27.84■■■□□ 2.05
CCDC47-204ENST00000582252 COPS6Q7L5N1 327 aa27.83■■■□□ 2.05
CCDC47-204ENST00000582252 HSCBQ8IWL3 235 aa27.83■■■□□ 2.05
CCDC47-204ENST00000582252 USP16Q9Y5T5 823 aa27.83■■■□□ 2.05
CCDC47-204ENST00000582252 BTAF1O14981 1849 aa27.82■■■□□ 2.04
CCDC47-204ENST00000582252 CWF19L2Q2TBE0 894 aaKnown RBP27.82■■■□□ 2.04
CCDC47-204ENST00000582252 METTL22Q9BUU2 404 aaPredicted RBP27.82■■■□□ 2.04
CCDC47-204ENST00000582252 ANKRD13DQ6ZTN6 518 aa27.81■■■□□ 2.04
CCDC47-204ENST00000582252 ARFGEF2Q9Y6D5 1785 aa27.8■■■□□ 2.04
CCDC47-204ENST00000582252 ERC1Q8IUD2 1116 aa27.8■■■□□ 2.04
CCDC47-204ENST00000582252 RHPN1Q8TCX5 695 aa27.8■■■□□ 2.04
CCDC47-204ENST00000582252 AFDNP55196 1824 aaKnown RBP27.79■■■□□ 2.04
CCDC47-204ENST00000582252 RXRBP28702 533 aa27.79■■■□□ 2.04
CCDC47-204ENST00000582252 SMARCC1Q92922 1105 aaPredicted RBP27.79■■■□□ 2.04
CCDC47-204ENST00000582252 SNX21Q969T3 373 aa27.79■■■□□ 2.04
CCDC47-204ENST00000582252 TEX13AQ9BXU3 409 aaPredicted RBP27.79■■■□□ 2.04
CCDC47-204ENST00000582252 CICQ96RK0 1608 aaPredicted RBP27.78■■■□□ 2.04
CCDC47-204ENST00000582252 KCNQ2O43526 872 aa27.78■■■□□ 2.04
CCDC47-204ENST00000582252 REC8O95072 547 aa27.78■■■□□ 2.04
CCDC47-204ENST00000582252 KRT27Q7Z3Y8 459 aa27.78■■■□□ 2.04
CCDC47-204ENST00000582252 NEURL1BA8MQ27 555 aa27.78■■■□□ 2.04
CCDC47-204ENST00000582252 LRP10Q7Z4F1 713 aa27.78■■■□□ 2.04
CCDC47-204ENST00000582252 RBM42Q9BTD8 480 aaKnown RBP27.78■■■□□ 2.04
CCDC47-204ENST00000582252 ZNF831Q5JPB2 1677 aa27.77■■■□□ 2.04
CCDC47-204ENST00000582252 TJP1Q07157 1748 aa27.77■■■□□ 2.04
CCDC47-204ENST00000582252 OS9Q13438 667 aaPredicted RBP27.77■■■□□ 2.04
CCDC47-204ENST00000582252 IGKV5-2P06315 115 aa27.76■■■□□ 2.03
CCDC47-204ENST00000582252 MYD88Q99836 296 aa27.76■■■□□ 2.03
CCDC47-204ENST00000582252 RGS17Q9UGC6 210 aaPredicted RBP27.76■■■□□ 2.03
CCDC47-204ENST00000582252 FAM182BQ5T319 152 aa27.75■■■□□ 2.03
CCDC47-204ENST00000582252 PALLDQ8WX93 1383 aa27.75■■■□□ 2.03
CCDC47-204ENST00000582252 ERC2O15083 957 aa27.75■■■□□ 2.03
CCDC47-204ENST00000582252 GCKRQ14397 625 aa27.75■■■□□ 2.03
CCDC47-204ENST00000582252 PLBD2Q8NHP8 589 aa27.75■■■□□ 2.03
CCDC47-204ENST00000582252 IL1RAPL2Q9NP60 686 aa27.75■■■□□ 2.03
CCDC47-204ENST00000582252 SUCLG2Q96I99 432 aa27.74■■■□□ 2.03
CCDC47-204ENST00000582252 FAM196AQ6ZSG2 479 aa27.73■■■□□ 2.03
CCDC47-204ENST00000582252 EP400Q96L91 3159 aa27.73■■■□□ 2.03
CCDC47-204ENST00000582252 STARD3NLO95772 234 aa27.72■■■□□ 2.03
CCDC47-204ENST00000582252 AK9Q5TCS8 1911 aa27.72■■■□□ 2.03
CCDC47-204ENST00000582252 TRIM6-TRIM34B2RNG4 842 aa27.72■■■□□ 2.03
CCDC47-204ENST00000582252 DNAJC10Q8IXB1 793 aa27.72■■■□□ 2.03
CCDC47-204ENST00000582252 CLASRPQ8N2M8 674 aaKnown RBP27.71■■■□□ 2.03
CCDC47-204ENST00000582252 USP26Q9BXU7 913 aa27.71■■■□□ 2.03
CCDC47-204ENST00000582252 COL15A1P39059 1388 aa27.71■■■□□ 2.03
CCDC47-204ENST00000582252 TTC41PQ6P2S7 1318 aa27.7■■■□□ 2.03
CCDC47-204ENST00000582252 SLC4A9Q96Q91 983 aa27.7■■■□□ 2.03
CCDC47-204ENST00000582252 BICC1Q9H694 974 aaKnown RBP27.7■■■□□ 2.03
CCDC47-204ENST00000582252 LOC102724428A0A0B4J2F2 783 aa27.7■■■□□ 2.02
CCDC47-204ENST00000582252 SIK1P57059 783 aa27.7■■■□□ 2.02
CCDC47-204ENST00000582252 NFKBIBQ15653 356 aa27.7■■■□□ 2.02
CCDC47-204ENST00000582252 GPATCH3Q96I76 525 aa27.7■■■□□ 2.02
CCDC47-204ENST00000582252 KIF2CQ99661 725 aa27.7■■■□□ 2.02
CCDC47-204ENST00000582252 NUP188Q5SRE5 1749 aa27.69■■■□□ 2.02
CCDC47-204ENST00000582252 USP42Q9H9J4 1324 aaKnown RBP27.69■■■□□ 2.02
CCDC47-204ENST00000582252 RABEP1Q15276 862 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms