RNA–Protein interactions for RNA: ENST00000582100.1

CCDC57-215, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-215ENST00000582100 LMNB1P20700 586 aa20.21■□□□□ 0.83
CCDC57-215ENST00000582100 RASSF7Q02833 373 aa20.21■□□□□ 0.83
CCDC57-215ENST00000582100 LMOD3Q0VAK6 560 aa20.21■□□□□ 0.83
CCDC57-215ENST00000582100 NIP7Q9Y221 180 aaKnown RBP eCLIP20.21■□□□□ 0.83
CCDC57-215ENST00000582100 ERVV-1B6SEH8 477 aa20.2■□□□□ 0.82
CCDC57-215ENST00000582100 TOMM70O94826 608 aa20.2■□□□□ 0.82
CCDC57-215ENST00000582100 SRGNP10124 158 aa20.2■□□□□ 0.82
CCDC57-215ENST00000582100 HLFQ16534 295 aa20.2■□□□□ 0.82
CCDC57-215ENST00000582100 STYK1Q6J9G0 422 aa20.2■□□□□ 0.82
CCDC57-215ENST00000582100 TPTE2Q6XPS3 522 aa20.2■□□□□ 0.82
CCDC57-215ENST00000582100 CNKSR1Q969H4 720 aa20.2■□□□□ 0.82
CCDC57-215ENST00000582100 NMRK2Q9NPI5 230 aa20.2■□□□□ 0.82
CCDC57-215ENST00000582100 TSPYL4Q9UJ04 414 aa20.2■□□□□ 0.82
CCDC57-215ENST00000582100 KDM2BQ8NHM5 1336 aa20.2■□□□□ 0.82
CCDC57-215ENST00000582100 ZC3H4Q9UPT8 1303 aaKnown RBP20.2■□□□□ 0.82
CCDC57-215ENST00000582100 COL11A2P13942 1736 aaPredicted RBP20.19■□□□□ 0.82
CCDC57-215ENST00000582100 RRP7AQ9Y3A4 280 aaKnown RBP20.19■□□□□ 0.82
CCDC57-215ENST00000582100 CEP350Q5VT06 3117 aa20.19■□□□□ 0.82
CCDC57-215ENST00000582100 NFKBIEO00221 500 aa20.18■□□□□ 0.82
CCDC57-215ENST00000582100 HSPA6P17066 643 aa20.18■□□□□ 0.82
CCDC57-215ENST00000582100 PRELPP51888 382 aa20.18■□□□□ 0.82
CCDC57-215ENST00000582100 RUNDC1Q96C34 613 aa20.18■□□□□ 0.82
CCDC57-215ENST00000582100 MASTLQ96GX5 879 aa20.18■□□□□ 0.82
CCDC57-215ENST00000582100 ERBB4Q15303 1308 aa20.18■□□□□ 0.82
CCDC57-215ENST00000582100 KLRG2A4D1S0 409 aaPredicted RBP20.17■□□□□ 0.82
CCDC57-215ENST00000582100 C21orf2O43822 256 aa20.17■□□□□ 0.82
CCDC57-215ENST00000582100 WDR43Q15061 677 aaKnown RBP eCLIP20.17■□□□□ 0.82
CCDC57-215ENST00000582100 NGEFQ8N5V2 710 aa20.17■□□□□ 0.82
CCDC57-215ENST00000582100 PRKRIP1Q9H875 184 aaPredicted RBP20.17■□□□□ 0.82
CCDC57-215ENST00000582100 MAP3K15Q6ZN16 1313 aa20.17■□□□□ 0.82
CCDC57-215ENST00000582100 KIF6Q6ZMV9 814 aa20.16■□□□□ 0.82
CCDC57-215ENST00000582100 CCDC146Q8IYE0 955 aa20.16■□□□□ 0.82
CCDC57-215ENST00000582100 MYL6BP14649 208 aa20.15■□□□□ 0.82
CCDC57-215ENST00000582100 PRPF40BQ6NWY9 871 aaKnown RBP20.15■□□□□ 0.82
CCDC57-215ENST00000582100 TTLL7Q6ZT98 887 aa20.15■□□□□ 0.82
CCDC57-215ENST00000582100 NPR1P16066 1061 aa20.14■□□□□ 0.81
CCDC57-215ENST00000582100 NEUROD2Q15784 382 aa20.14■□□□□ 0.81
CCDC57-215ENST00000582100 SOGA3Q5TF21 947 aa20.14■□□□□ 0.81
CCDC57-215ENST00000582100 ZNF219Q9P2Y4 722 aaPredicted RBP20.14■□□□□ 0.81
CCDC57-215ENST00000582100 ADAMTS8Q9UP79 889 aa20.14■□□□□ 0.81
CCDC57-215ENST00000582100 FER1L6Q2WGJ9 1857 aa20.13■□□□□ 0.81
CCDC57-215ENST00000582100 SLX4Q8IY92 1834 aa20.13■□□□□ 0.81
CCDC57-215ENST00000582100 LTBP3Q9NS15 1303 aa20.13■□□□□ 0.81
CCDC57-215ENST00000582100 FAM177BA6PVY3 158 aa20.13■□□□□ 0.81
CCDC57-215ENST00000582100 RBM46Q8TBY0 533 aaKnown RBP20.13■□□□□ 0.81
CCDC57-215ENST00000582100 NYXQ9GZU5 481 aa20.13■□□□□ 0.81
CCDC57-215ENST00000582100 RRAGCQ9HB90 399 aa20.13■□□□□ 0.81
CCDC57-215ENST00000582100 CCDC88AQ3V6T2 1871 aa20.13■□□□□ 0.81
CCDC57-215ENST00000582100 NUP98P52948 1817 aa20.13■□□□□ 0.81
CCDC57-215ENST00000582100 GLTPD2A6NH11 291 aa20.12■□□□□ 0.81
CCDC57-215ENST00000582100 CHL1O00533 1208 aa20.12■□□□□ 0.81
CCDC57-215ENST00000582100 GTF2E1P29083 439 aaPredicted RBP20.12■□□□□ 0.81
CCDC57-215ENST00000582100 C16orf71Q8IYS4 520 aaPredicted RBP20.12■□□□□ 0.81
CCDC57-215ENST00000582100 TRIM35Q9UPQ4 493 aa20.12■□□□□ 0.81
CCDC57-215ENST00000582100 ARFGEF2Q9Y6D5 1785 aa20.12■□□□□ 0.81
CCDC57-215ENST00000582100 TNRC6CQ9HCJ0 1690 aaKnown RBP20.11■□□□□ 0.81
CCDC57-215ENST00000582100 EIF2S2P20042 333 aaKnown RBP20.11■□□□□ 0.81
CCDC57-215ENST00000582100 PDIA6Q15084 440 aa20.11■□□□□ 0.81
CCDC57-215ENST00000582100 LRP10Q7Z4F1 713 aa20.11■□□□□ 0.81
CCDC57-215ENST00000582100 C7orf43Q8WVR3 580 aa20.11■□□□□ 0.81
CCDC57-215ENST00000582100 TAOK3Q9H2K8 898 aa20.11■□□□□ 0.81
CCDC57-215ENST00000582100 GIGYF2Q6Y7W6 1299 aaKnown RBP20.1■□□□□ 0.81
CCDC57-215ENST00000582100 ZBTB3Q9H5J0 574 aa20.1■□□□□ 0.81
CCDC57-215ENST00000582100 CACNA1SQ13698 1873 aa20.09■□□□□ 0.81
CCDC57-215ENST00000582100 IBTKQ9P2D0 1353 aaPredicted RBP20.09■□□□□ 0.81
CCDC57-215ENST00000582100 ALDH1B1P30837 517 aa20.09■□□□□ 0.81
CCDC57-215ENST00000582100 ERFEQ4G0M1 354 aa20.09■□□□□ 0.81
CCDC57-215ENST00000582100 ZNF34Q8IZ26 560 aa20.09■□□□□ 0.81
CCDC57-215ENST00000582100 UBN2Q6ZU65 1347 aa20.08■□□□□ 0.81
CCDC57-215ENST00000582100 TIAM2Q8IVF5 1701 aa20.08■□□□□ 0.81
CCDC57-215ENST00000582100 DICER1Q9UPY3 1922 aaKnown RBP20.08■□□□□ 0.81
CCDC57-215ENST00000582100 GPTP24298 496 aa20.08■□□□□ 0.81
CCDC57-215ENST00000582100 FSTL1Q12841 308 aa20.08■□□□□ 0.81
CCDC57-215ENST00000582100 DPY19L2Q6NUT2 758 aa20.08■□□□□ 0.81
CCDC57-215ENST00000582100 NUTM1Q86Y26 1132 aa20.08■□□□□ 0.81
CCDC57-215ENST00000582100 VEGFAP15692 232 aaPredicted RBP20.07■□□□□ 0.8
CCDC57-215ENST00000582100 APLP1P51693 650 aa20.07■□□□□ 0.8
CCDC57-215ENST00000582100 PROSER3Q2NL68 480 aa20.07■□□□□ 0.8
CCDC57-215ENST00000582100 CRY2Q49AN0 593 aa20.07■□□□□ 0.8
CCDC57-215ENST00000582100 CCDC93Q567U6 631 aa20.07■□□□□ 0.8
CCDC57-215ENST00000582100 SUSD4Q5VX71 490 aa20.07■□□□□ 0.8
CCDC57-215ENST00000582100 ABCC12Q96J65 1359 aa20.07■□□□□ 0.8
CCDC57-215ENST00000582100 RIC1Q4ADV7 1423 aa20.06■□□□□ 0.8
CCDC57-215ENST00000582100 PARP10Q53GL7 1025 aa20.06■□□□□ 0.8
CCDC57-215ENST00000582100 LAS1LQ9Y4W2 734 aaKnown RBP20.06■□□□□ 0.8
CCDC57-215ENST00000582100 ANXA1P04083 346 aa20.05■□□□□ 0.8
CCDC57-215ENST00000582100 ZEB1P37275 1124 aaPredicted RBP20.05■□□□□ 0.8
CCDC57-215ENST00000582100 PPP1R42Q7Z4L9 355 aa20.05■□□□□ 0.8
CCDC57-215ENST00000582100 NTSR2O95665 410 aa20.04■□□□□ 0.8
CCDC57-215ENST00000582100 HOXB7P09629 217 aa20.04■□□□□ 0.8
CCDC57-215ENST00000582100 KRT24Q2M2I5 525 aa20.04■□□□□ 0.8
CCDC57-215ENST00000582100 COPS6Q7L5N1 327 aa20.04■□□□□ 0.8
CCDC57-215ENST00000582100 RTKN2Q8IZC4 609 aa20.04■□□□□ 0.8
CCDC57-215ENST00000582100 NECTIN2Q92692 538 aa20.04■□□□□ 0.8
CCDC57-215ENST00000582100 CFAP44Q96MT7 982 aa20.04■□□□□ 0.8
CCDC57-215ENST00000582100 DDX21Q9NR30 783 aaKnown RBP eCLIP20.04■□□□□ 0.8
CCDC57-215ENST00000582100 HOXA10P31260 410 aaPredicted RBP20.03■□□□□ 0.8
CCDC57-215ENST00000582100 FKBP4Q02790 459 aaKnown RBP eCLIP20.03■□□□□ 0.8
CCDC57-215ENST00000582100 HSP90AB3PQ58FF7 597 aa20.02■□□□□ 0.8
CCDC57-215ENST00000582100 SMC1BQ8NDV3 1235 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms