RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 SLC4A2P04920 1241 aa20.45■□□□□ 0.86
CCDC57-213ENST00000581625 CLEC4GQ6UXB4 293 aa20.45■□□□□ 0.86
CCDC57-213ENST00000581625 COPS6Q7L5N1 327 aa20.45■□□□□ 0.86
CCDC57-213ENST00000581625 SPON1Q9HCB6 807 aa20.45■□□□□ 0.86
CCDC57-213ENST00000581625 LRP5O75197 1615 aa20.45■□□□□ 0.86
CCDC57-213ENST00000581625 DDX58O95786 925 aaKnown RBP20.44■□□□□ 0.86
CCDC57-213ENST00000581625 TTLL7Q6ZT98 887 aa20.44■□□□□ 0.86
CCDC57-213ENST00000581625 ATP10DQ9P241 1426 aa20.44■□□□□ 0.86
CCDC57-213ENST00000581625 POLD1P28340 1107 aa20.43■□□□□ 0.86
CCDC57-213ENST00000581625 AIMP1Q12904 312 aaKnown RBP20.43■□□□□ 0.86
CCDC57-213ENST00000581625 BCL2L12Q9HB09 334 aa20.43■□□□□ 0.86
CCDC57-213ENST00000581625 TCERG1O14776 1098 aaKnown RBP20.42■□□□□ 0.86
CCDC57-213ENST00000581625 FKBP8Q14318 412 aa20.42■□□□□ 0.86
CCDC57-213ENST00000581625 MSL1Q68DK7 614 aa20.42■□□□□ 0.86
CCDC57-213ENST00000581625 PLBD2Q8NHP8 589 aa20.42■□□□□ 0.86
CCDC57-213ENST00000581625 ZBTB3Q9H5J0 574 aa20.42■□□□□ 0.86
CCDC57-213ENST00000581625 PHAXQ9H814 394 aaKnown RBP20.42■□□□□ 0.86
CCDC57-213ENST00000581625 FLIIQ13045 1269 aa20.41■□□□□ 0.86
CCDC57-213ENST00000581625 GIGYF2Q6Y7W6 1299 aaKnown RBP20.41■□□□□ 0.86
CCDC57-213ENST00000581625 ANKRD13DQ6ZTN6 518 aa20.41■□□□□ 0.86
CCDC57-213ENST00000581625 SMC4Q9NTJ3 1288 aa20.41■□□□□ 0.86
CCDC57-213ENST00000581625 ARFGEF2Q9Y6D5 1785 aa20.41■□□□□ 0.86
CCDC57-213ENST00000581625 HSP90AB3PQ58FF7 597 aa20.4■□□□□ 0.86
CCDC57-213ENST00000581625 CARMIL3Q8ND23 1372 aa20.4■□□□□ 0.86
CCDC57-213ENST00000581625 SSH1Q8WYL5 1049 aa20.4■□□□□ 0.86
CCDC57-213ENST00000581625 SGIP1Q9BQI5 828 aa20.4■□□□□ 0.86
CCDC57-213ENST00000581625 ATF5Q9Y2D1 282 aaPredicted RBP20.4■□□□□ 0.86
CCDC57-213ENST00000581625 MMP10P09238 476 aa20.39■□□□□ 0.85
CCDC57-213ENST00000581625 PTGER2P43116 358 aa20.39■□□□□ 0.85
CCDC57-213ENST00000581625 RARSP54136 660 aaKnown RBP20.39■□□□□ 0.85
CCDC57-213ENST00000581625 ANKRD36CQ5JPF3 1778 aa20.39■□□□□ 0.85
CCDC57-213ENST00000581625 PTPRCP08575 1304 aa20.38■□□□□ 0.85
CCDC57-213ENST00000581625 KIF16BQ96L93 1317 aa20.38■□□□□ 0.85
CCDC57-213ENST00000581625 BRPF1P55201 1214 aaPredicted RBP20.38■□□□□ 0.85
CCDC57-213ENST00000581625 FKBP5Q13451 457 aaPredicted RBP20.38■□□□□ 0.85
CCDC57-213ENST00000581625 NFIXQ14938 502 aa20.38■□□□□ 0.85
CCDC57-213ENST00000581625 HLFQ16534 295 aa20.38■□□□□ 0.85
CCDC57-213ENST00000581625 RIC3Q7Z5B4 369 aa20.38■□□□□ 0.85
CCDC57-213ENST00000581625 MRPL50Q8N5N7 158 aaKnown RBP20.38■□□□□ 0.85
CCDC57-213ENST00000581625 NUP98P52948 1817 aa20.38■□□□□ 0.85
CCDC57-213ENST00000581625 TM4SF1P30408 202 aa20.37■□□□□ 0.85
CCDC57-213ENST00000581625 TBC1D9BQ66K14 1250 aa20.37■□□□□ 0.85
CCDC57-213ENST00000581625 KSR2Q6VAB6 950 aa20.37■□□□□ 0.85
CCDC57-213ENST00000581625 G2E3Q7L622 706 aa20.37■□□□□ 0.85
CCDC57-213ENST00000581625 BCL2L13Q9BXK5 485 aa20.37■□□□□ 0.85
CCDC57-213ENST00000581625 PARP3Q9Y6F1 533 aa20.37■□□□□ 0.85
CCDC57-213ENST00000581625 ADCY9O60503 1353 aa20.36■□□□□ 0.85
CCDC57-213ENST00000581625 IBTKQ9P2D0 1353 aaPredicted RBP20.36■□□□□ 0.85
CCDC57-213ENST00000581625 SETDB2Q96T68 719 aa20.36■□□□□ 0.85
CCDC57-213ENST00000581625 NIP7Q9Y221 180 aaKnown RBP eCLIP20.36■□□□□ 0.85
CCDC57-213ENST00000581625 NRXN2Q9P2S2 1712 aa20.36■□□□□ 0.85
CCDC57-213ENST00000581625 POLRMTO00411 1230 aaKnown RBP20.35■□□□□ 0.85
CCDC57-213ENST00000581625 PARP10Q53GL7 1025 aa20.35■□□□□ 0.85
CCDC57-213ENST00000581625 PI4KAP2A4QPH2 592 aa20.34■□□□□ 0.85
CCDC57-213ENST00000581625 DDR1Q08345 913 aa20.34■□□□□ 0.85
CCDC57-213ENST00000581625 TCIRG1Q13488 830 aa20.34■□□□□ 0.85
CCDC57-213ENST00000581625 BICDL1Q6ZP65 573 aa20.34■□□□□ 0.85
CCDC57-213ENST00000581625 PI4KAP1Q8N8J0 262 aa20.34■□□□□ 0.85
CCDC57-213ENST00000581625 MAP3K2Q9Y2U5 619 aa20.34■□□□□ 0.85
CCDC57-213ENST00000581625 PXDNLA1KZ92 1463 aa20.33■□□□□ 0.85
CCDC57-213ENST00000581625 ZNF34Q8IZ26 560 aa20.33■□□□□ 0.85
CCDC57-213ENST00000581625 RNF123Q5XPI4 1314 aa20.32■□□□□ 0.84
CCDC57-213ENST00000581625 UBN2Q6ZU65 1347 aa20.32■□□□□ 0.84
CCDC57-213ENST00000581625 NEXNQ0ZGT2 675 aa20.32■□□□□ 0.84
CCDC57-213ENST00000581625 DNAAF4Q8WXU2 420 aa20.32■□□□□ 0.84
CCDC57-213ENST00000581625 METTL22Q9BUU2 404 aaPredicted RBP20.32■□□□□ 0.84
CCDC57-213ENST00000581625 PPP1R1BQ9UD71 204 aaPredicted RBP20.32■□□□□ 0.84
CCDC57-213ENST00000581625 C10orf71Q711Q0 1435 aa20.32■□□□□ 0.84
CCDC57-213ENST00000581625 SERPINB2P05120 415 aa20.31■□□□□ 0.84
CCDC57-213ENST00000581625 NYXQ9GZU5 481 aa20.31■□□□□ 0.84
CCDC57-213ENST00000581625 GPTP24298 496 aa20.3■□□□□ 0.84
CCDC57-213ENST00000581625 TRIM28Q13263 835 aaKnown RBP20.3■□□□□ 0.84
CCDC57-213ENST00000581625 PPP1R42Q7Z4L9 355 aa20.3■□□□□ 0.84
CCDC57-213ENST00000581625 NBPF5PQ86XG9 351 aaPredicted RBP20.3■□□□□ 0.84
CCDC57-213ENST00000581625 CNBD1Q8NA66 436 aa20.3■□□□□ 0.84
CCDC57-213ENST00000581625 MYD88Q99836 296 aa20.3■□□□□ 0.84
CCDC57-213ENST00000581625 ISCA1Q9BUE6 129 aa20.3■□□□□ 0.84
CCDC57-213ENST00000581625 AFDNP55196 1824 aaKnown RBP20.3■□□□□ 0.84
CCDC57-213ENST00000581625 NPHP1O15259 732 aa20.29■□□□□ 0.84
CCDC57-213ENST00000581625 IPO8O15397 1037 aaKnown RBP20.29■□□□□ 0.84
CCDC57-213ENST00000581625 TPTE2Q6XPS3 522 aa20.29■□□□□ 0.84
CCDC57-213ENST00000581625 NLRP10Q86W26 655 aa20.29■□□□□ 0.84
CCDC57-213ENST00000581625 ARHGAP45Q92619 1136 aa20.29■□□□□ 0.84
CCDC57-213ENST00000581625 API5Q9BZZ5 524 aaKnown RBP20.29■□□□□ 0.84
CCDC57-213ENST00000581625 RCAN3Q9UKA8 241 aa20.29■□□□□ 0.84
CCDC57-213ENST00000581625 BCAR3O75815 825 aa20.28■□□□□ 0.84
CCDC57-213ENST00000581625 CCDC191Q8NCU4 936 aa20.28■□□□□ 0.84
CCDC57-213ENST00000581625 LINS1Q8NG48 757 aa20.28■□□□□ 0.84
CCDC57-213ENST00000581625 NOB1Q9ULX3 412 aaKnown RBP20.28■□□□□ 0.84
CCDC57-213ENST00000581625 RIC1Q4ADV7 1423 aa20.27■□□□□ 0.84
CCDC57-213ENST00000581625 KIF13BQ9NQT8 1826 aa20.27■□□□□ 0.84
CCDC57-213ENST00000581625 ST5P78524 1137 aa20.27■□□□□ 0.84
CCDC57-213ENST00000581625 N4BP2Q86UW6 1770 aaPredicted RBP20.26■□□□□ 0.83
CCDC57-213ENST00000581625 F6X3S4 739 aa20.26■□□□□ 0.83
CCDC57-213ENST00000581625 ATP5J2-PTCD1G3V325 749 aa20.26■□□□□ 0.83
CCDC57-213ENST00000581625 NTSR2O95665 410 aa20.26■□□□□ 0.83
CCDC57-213ENST00000581625 SUSD4Q5VX71 490 aa20.26■□□□□ 0.83
CCDC57-213ENST00000581625 PRR5LQ6MZQ0 368 aa20.26■□□□□ 0.83
CCDC57-213ENST00000581625 UTP14AQ9BVJ6 771 aaKnown RBP20.26■□□□□ 0.83
CCDC57-213ENST00000581625 CWC25Q9NXE8 425 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms