RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 PXDNLA1KZ92 1463 aa16.4■□□□□ 0.22
SNORD55-201ENST00000581525 CARMIL3Q8ND23 1372 aa16.39■□□□□ 0.21
SNORD55-201ENST00000581525 KIAA1551Q9HCM1 1747 aa16.39■□□□□ 0.21
SNORD55-201ENST00000581525 MYL6BP14649 208 aa16.39■□□□□ 0.21
SNORD55-201ENST00000581525 DBF4Q9UBU7 674 aaPredicted RBP16.39■□□□□ 0.21
SNORD55-201ENST00000581525 HDGFL1Q5TGJ6 251 aa16.38■□□□□ 0.21
SNORD55-201ENST00000581525 GIGYF2Q6Y7W6 1299 aaKnown RBP16.38■□□□□ 0.21
SNORD55-201ENST00000581525 ZNF34Q8IZ26 560 aa16.38■□□□□ 0.21
SNORD55-201ENST00000581525 KLHL34Q8N239 644 aa16.38■□□□□ 0.21
SNORD55-201ENST00000581525 PDZRN3Q9UPQ7 1066 aa16.38■□□□□ 0.21
SNORD55-201ENST00000581525 ATP10DQ9P241 1426 aa16.37■□□□□ 0.21
SNORD55-201ENST00000581525 KLRG2A4D1S0 409 aaPredicted RBP16.37■□□□□ 0.21
SNORD55-201ENST00000581525 YBX3P16989 372 aaKnown RBP eCLIP16.37■□□□□ 0.21
SNORD55-201ENST00000581525 PRR5LQ6MZQ0 368 aa16.37■□□□□ 0.21
SNORD55-201ENST00000581525 COPS6Q7L5N1 327 aa16.37■□□□□ 0.21
SNORD55-201ENST00000581525 TSPYL6Q8N831 410 aa16.37■□□□□ 0.21
SNORD55-201ENST00000581525 BRIP1Q9BX63 1249 aa16.37■□□□□ 0.21
SNORD55-201ENST00000581525 HYPKQ9NX55 129 aa16.37■□□□□ 0.21
SNORD55-201ENST00000581525 AFDNP55196 1824 aaKnown RBP16.36■□□□□ 0.21
SNORD55-201ENST00000581525 A0A0G2JLW4 131 aa16.36■□□□□ 0.21
SNORD55-201ENST00000581525 GRIN3BO60391 1043 aa16.36■□□□□ 0.21
SNORD55-201ENST00000581525 DPEP1P16444 411 aa16.36■□□□□ 0.21
SNORD55-201ENST00000581525 KIF6Q6ZMV9 814 aa16.36■□□□□ 0.21
SNORD55-201ENST00000581525 BICDL1Q6ZP65 573 aa16.36■□□□□ 0.21
SNORD55-201ENST00000581525 TSR2Q969E8 191 aaKnown RBP16.36■□□□□ 0.21
SNORD55-201ENST00000581525 SPINK5Q9NQ38 1064 aaPredicted RBP16.36■□□□□ 0.21
SNORD55-201ENST00000581525 CHPF2Q9P2E5 772 aa16.36■□□□□ 0.21
SNORD55-201ENST00000581525 ANXA1P04083 346 aa16.35■□□□□ 0.21
SNORD55-201ENST00000581525 GPR162Q16538 588 aa16.35■□□□□ 0.21
SNORD55-201ENST00000581525 MIER1Q8N108 512 aa16.35■□□□□ 0.21
SNORD55-201ENST00000581525 XAGE3Q8WTP9 111 aa16.35■□□□□ 0.21
SNORD55-201ENST00000581525 SENP3-EIF4A1A0A087X0R7 540 aa16.34■□□□□ 0.21
SNORD55-201ENST00000581525 CCDC30Q5VVM6 783 aa16.34■□□□□ 0.21
SNORD55-201ENST00000581525 TPTE2Q6XPS3 522 aa16.34■□□□□ 0.21
SNORD55-201ENST00000581525 NECTIN2Q92692 538 aa16.34■□□□□ 0.21
SNORD55-201ENST00000581525 NIP7Q9Y221 180 aaKnown RBP eCLIP16.34■□□□□ 0.21
SNORD55-201ENST00000581525 FANCIQ9NVI1 1328 aa16.34■□□□□ 0.21
SNORD55-201ENST00000581525 IBTKQ9P2D0 1353 aaPredicted RBP16.34■□□□□ 0.21
SNORD55-201ENST00000581525 ELL2O00472 640 aaPredicted RBP16.33■□□□□ 0.2
SNORD55-201ENST00000581525 PLBD2Q8NHP8 589 aa16.33■□□□□ 0.2
SNORD55-201ENST00000581525 PIM2Q9P1W9 311 aa16.33■□□□□ 0.2
SNORD55-201ENST00000581525 SALL2Q9Y467 1007 aaPredicted RBP16.33■□□□□ 0.2
SNORD55-201ENST00000581525 VAMP4O75379 141 aa16.32■□□□□ 0.2
SNORD55-201ENST00000581525 PDE6BP35913 854 aa16.32■□□□□ 0.2
SNORD55-201ENST00000581525 GOLGA2Q08379 1002 aa16.32■□□□□ 0.2
SNORD55-201ENST00000581525 TRIM28Q13263 835 aaKnown RBP16.32■□□□□ 0.2
SNORD55-201ENST00000581525 TCIRG1Q13488 830 aa16.32■□□□□ 0.2
SNORD55-201ENST00000581525 TWISTNBQ3B726 338 aaPredicted RBP16.32■□□□□ 0.2
SNORD55-201ENST00000581525 PARP10Q53GL7 1025 aa16.32■□□□□ 0.2
SNORD55-201ENST00000581525 ANKRD13DQ6ZTN6 518 aa16.32■□□□□ 0.2
SNORD55-201ENST00000581525 CNBD1Q8NA66 436 aa16.32■□□□□ 0.2
SNORD55-201ENST00000581525 ZBTB3Q9H5J0 574 aa16.32■□□□□ 0.2
SNORD55-201ENST00000581525 NUP98P52948 1817 aa16.31■□□□□ 0.2
SNORD55-201ENST00000581525 UBN2Q6ZU65 1347 aa16.31■□□□□ 0.2
SNORD55-201ENST00000581525 CHRNA5P30532 468 aa16.31■□□□□ 0.2
SNORD55-201ENST00000581525 HSP90AB3PQ58FF7 597 aa16.31■□□□□ 0.2
SNORD55-201ENST00000581525 NBPF5PQ86XG9 351 aaPredicted RBP16.31■□□□□ 0.2
SNORD55-201ENST00000581525 TRMT2AQ8IZ69 625 aaKnown RBP16.31■□□□□ 0.2
SNORD55-201ENST00000581525 NYXQ9GZU5 481 aa16.31■□□□□ 0.2
SNORD55-201ENST00000581525 MYH16Q9H6N6 1097 aa16.31■□□□□ 0.2
SNORD55-201ENST00000581525 RIC1Q4ADV7 1423 aa16.3■□□□□ 0.2
SNORD55-201ENST00000581525 SLC10A5Q5PT55 438 aa16.3■□□□□ 0.2
SNORD55-201ENST00000581525 SUSD4Q5VX71 490 aa16.3■□□□□ 0.2
SNORD55-201ENST00000581525 ISCA1Q9BUE6 129 aa16.3■□□□□ 0.2
SNORD55-201ENST00000581525 BRCA1P38398 1863 aaKnown RBP16.29■□□□□ 0.2
SNORD55-201ENST00000581525 N4BP2Q86UW6 1770 aaPredicted RBP16.29■□□□□ 0.2
SNORD55-201ENST00000581525 RNF123Q5XPI4 1314 aa16.29■□□□□ 0.2
SNORD55-201ENST00000581525 H0YIN7 160 aa16.29■□□□□ 0.2
SNORD55-201ENST00000581525 NTSR2O95665 410 aa16.29■□□□□ 0.2
SNORD55-201ENST00000581525 SRGNP10124 158 aa16.29■□□□□ 0.2
SNORD55-201ENST00000581525 ST5P78524 1137 aa16.29■□□□□ 0.2
SNORD55-201ENST00000581525 EXOSC9Q06265 439 aaKnown RBP16.29■□□□□ 0.2
SNORD55-201ENST00000581525 AIMP1Q12904 312 aaKnown RBP16.29■□□□□ 0.2
SNORD55-201ENST00000581525 PHAXQ9H814 394 aaKnown RBP16.29■□□□□ 0.2
SNORD55-201ENST00000581525 E9PSI1 815 aa16.28■□□□□ 0.2
SNORD55-201ENST00000581525 SLFN5Q08AF3 891 aa16.28■□□□□ 0.2
SNORD55-201ENST00000581525 DALRD3Q5D0E6 543 aaKnown RBP16.28■□□□□ 0.2
SNORD55-201ENST00000581525 PPP1R42Q7Z4L9 355 aa16.28■□□□□ 0.2
SNORD55-201ENST00000581525 NLRP10Q86W26 655 aa16.28■□□□□ 0.2
SNORD55-201ENST00000581525 ANKRD31Q8N7Z5 1873 aa16.27■□□□□ 0.2
SNORD55-201ENST00000581525 CRY2Q49AN0 593 aa16.27■□□□□ 0.2
SNORD55-201ENST00000581525 STYK1Q6J9G0 422 aa16.27■□□□□ 0.2
SNORD55-201ENST00000581525 C2CD5Q86YS7 1000 aa16.27■□□□□ 0.2
SNORD55-201ENST00000581525 TTLL6Q8N841 843 aa16.27■□□□□ 0.2
SNORD55-201ENST00000581525 GPTP24298 496 aa16.26■□□□□ 0.19
SNORD55-201ENST00000581525 CCDC24Q8N4L8 307 aa16.26■□□□□ 0.19
SNORD55-201ENST00000581525 MASTLQ96GX5 879 aa16.26■□□□□ 0.19
SNORD55-201ENST00000581525 BCS1LQ9Y276 419 aa16.26■□□□□ 0.19
SNORD55-201ENST00000581525 SLC4A2P04920 1241 aa16.25■□□□□ 0.19
SNORD55-201ENST00000581525 ERFEQ4G0M1 354 aa16.25■□□□□ 0.19
SNORD55-201ENST00000581525 PELP1Q8IZL8 1130 aaKnown RBP16.25■□□□□ 0.19
SNORD55-201ENST00000581525 UTP14AQ9BVJ6 771 aaKnown RBP16.25■□□□□ 0.19
SNORD55-201ENST00000581525 DLEC1Q9Y238 1755 aa16.24■□□□□ 0.19
SNORD55-201ENST00000581525 NPR1P16066 1061 aa16.24■□□□□ 0.19
SNORD55-201ENST00000581525 HOXA10P31260 410 aaPredicted RBP16.24■□□□□ 0.19
SNORD55-201ENST00000581525 C7orf43Q8WVR3 580 aa16.24■□□□□ 0.19
SNORD55-201ENST00000581525 STK31Q9BXU1 1019 aa16.24■□□□□ 0.19
SNORD55-201ENST00000581525 DDX58O95786 925 aaKnown RBP16.23■□□□□ 0.19
SNORD55-201ENST00000581525 YY1P25490 414 aa16.23■□□□□ 0.19
SNORD55-201ENST00000581525 KSR2Q6VAB6 950 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms