RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 RAPGEF4Q8WZA2 1011 aa8.59□□□□□ -1.03
CMTM4-205ENST00000581487 PRAG1Q86YV5 1406 aa8.59□□□□□ -1.03
CMTM4-205ENST00000581487 GPATCH8Q9UKJ3 1502 aaKnown RBP8.59□□□□□ -1.03
CMTM4-205ENST00000581487 MAP3K7CLP57077 242 aa8.59□□□□□ -1.03
CMTM4-205ENST00000581487 TTC22Q5TAA0 569 aa8.59□□□□□ -1.03
CMTM4-205ENST00000581487 SUDS3Q9H7L9 328 aaPredicted RBP8.59□□□□□ -1.03
CMTM4-205ENST00000581487 BIVM-ERCC5R4GMW8 1640 aa8.59□□□□□ -1.03
CMTM4-205ENST00000581487 PSMC4P43686 418 aa8.59□□□□□ -1.03
CMTM4-205ENST00000581487 FILIP1LQ4L180 1135 aa8.59□□□□□ -1.03
CMTM4-205ENST00000581487 AACSQ86V21 672 aa8.59□□□□□ -1.03
CMTM4-205ENST00000581487 CEP57L1Q8IYX8 460 aa8.59□□□□□ -1.03
CMTM4-205ENST00000581487 RBM27Q9P2N5 1060 aaKnown RBP8.59□□□□□ -1.03
CMTM4-205ENST00000581487 ODF2LQ9ULJ1 636 aa8.59□□□□□ -1.03
CMTM4-205ENST00000581487 NSD2O96028 1365 aa8.59□□□□□ -1.03
CMTM4-205ENST00000581487 DHX8Q14562 1220 aaKnown RBP8.58□□□□□ -1.04
CMTM4-205ENST00000581487 ZSCAN23Q3MJ62 389 aa8.58□□□□□ -1.04
CMTM4-205ENST00000581487 CFAP58Q5T655 872 aa8.58□□□□□ -1.04
CMTM4-205ENST00000581487 CCDC83Q8IWF9 413 aa8.58□□□□□ -1.04
CMTM4-205ENST00000581487 CCDC160A6NGH7 325 aa8.58□□□□□ -1.04
CMTM4-205ENST00000581487 CASTP20810 708 aaKnown RBP8.58□□□□□ -1.04
CMTM4-205ENST00000581487 TMCO4Q5TGY1 634 aa8.58□□□□□ -1.04
CMTM4-205ENST00000581487 LRCH2Q5VUJ6 765 aa8.58□□□□□ -1.04
CMTM4-205ENST00000581487 JAKMIP3Q5VZ66 844 aa8.58□□□□□ -1.04
CMTM4-205ENST00000581487 URI1O94763 535 aaPredicted RBP8.58□□□□□ -1.04
CMTM4-205ENST00000581487 PRPF40BQ6NWY9 871 aaKnown RBP8.58□□□□□ -1.04
CMTM4-205ENST00000581487 MPHOSPH6Q99547 160 aaKnown RBP8.58□□□□□ -1.04
CMTM4-205ENST00000581487 MIS18AQ9NYP9 233 aa8.58□□□□□ -1.04
CMTM4-205ENST00000581487 SETSIPP0DME0 302 aa8.58□□□□□ -1.04
CMTM4-205ENST00000581487 LIG1P18858 919 aa8.58□□□□□ -1.04
CMTM4-205ENST00000581487 ME1P48163 572 aa8.58□□□□□ -1.04
CMTM4-205ENST00000581487 NAA25Q14CX7 972 aa8.58□□□□□ -1.04
CMTM4-205ENST00000581487 PLEKHO1Q53GL0 409 aaPredicted RBP8.58□□□□□ -1.04
CMTM4-205ENST00000581487 SYTL4Q96C24 671 aaPredicted RBP8.58□□□□□ -1.04
CMTM4-205ENST00000581487 DNAJC5BQ9UF47 199 aa8.58□□□□□ -1.04
CMTM4-205ENST00000581487 CAMK4Q16566 473 aa8.58□□□□□ -1.04
CMTM4-205ENST00000581487 CEP57Q86XR8 500 aa8.58□□□□□ -1.04
CMTM4-205ENST00000581487 SMC5Q8IY18 1101 aa8.58□□□□□ -1.04
CMTM4-205ENST00000581487 PIBF1Q8WXW3 757 aa8.58□□□□□ -1.04
CMTM4-205ENST00000581487 ARHGAP45Q92619 1136 aa8.58□□□□□ -1.04
CMTM4-205ENST00000581487 SPINK5Q9NQ38 1064 aaPredicted RBP8.58□□□□□ -1.04
CMTM4-205ENST00000581487 MAP9Q49MG5 647 aa8.58□□□□□ -1.04
CMTM4-205ENST00000581487 IQCEQ6IPM2 695 aa8.58□□□□□ -1.04
CMTM4-205ENST00000581487 KRBA2Q6ZNG9 492 aa8.58□□□□□ -1.04
CMTM4-205ENST00000581487 LUZP1Q86V48 1076 aa8.57□□□□□ -1.04
CMTM4-205ENST00000581487 C14orf93Q9H972 538 aaKnown RBP8.57□□□□□ -1.04
CMTM4-205ENST00000581487 GDPD2Q9HCC8 539 aa8.57□□□□□ -1.04
CMTM4-205ENST00000581487 MBIPQ9NS73 344 aa8.57□□□□□ -1.04
CMTM4-205ENST00000581487 NLRP2Q9NX02 1062 aa8.57□□□□□ -1.04
CMTM4-205ENST00000581487 MKRN1Q9UHC7 482 aaKnown RBP8.57□□□□□ -1.04
CMTM4-205ENST00000581487 POLR3AO14802 1390 aaPredicted RBP8.57□□□□□ -1.04
CMTM4-205ENST00000581487 NME9Q86XW9 330 aa8.57□□□□□ -1.04
CMTM4-205ENST00000581487 LRRC45Q96CN5 670 aa8.57□□□□□ -1.04
CMTM4-205ENST00000581487 SIL1Q9H173 461 aa8.57□□□□□ -1.04
CMTM4-205ENST00000581487 ANAPC4Q9UJX5 808 aa8.57□□□□□ -1.04
CMTM4-205ENST00000581487 FKBP15Q5T1M5 1219 aa8.57□□□□□ -1.04
CMTM4-205ENST00000581487 PPFIBP1Q86W92 1011 aa8.57□□□□□ -1.04
CMTM4-205ENST00000581487 SMARCC1Q92922 1105 aaPredicted RBP8.57□□□□□ -1.04
CMTM4-205ENST00000581487 FAM114A2Q9NRY5 505 aa8.57□□□□□ -1.04
CMTM4-205ENST00000581487 NUP160Q12769 1436 aa8.57□□□□□ -1.04
CMTM4-205ENST00000581487 F6X3S4 739 aa8.57□□□□□ -1.04
CMTM4-205ENST00000581487 RBM42Q9BTD8 480 aaKnown RBP8.57□□□□□ -1.04
CMTM4-205ENST00000581487 TRMT1Q9NXH9 659 aaKnown RBP8.57□□□□□ -1.04
CMTM4-205ENST00000581487 KIF2AO00139 706 aaPredicted RBP8.57□□□□□ -1.04
CMTM4-205ENST00000581487 KDM4AO75164 1064 aa8.57□□□□□ -1.04
CMTM4-205ENST00000581487 HSP90AA5PQ58FG0 334 aa8.57□□□□□ -1.04
CMTM4-205ENST00000581487 ANKFY1Q9P2R3 1169 aa8.57□□□□□ -1.04
CMTM4-205ENST00000581487 CUL7Q14999 1698 aa8.56□□□□□ -1.04
CMTM4-205ENST00000581487 ERCC3P19447 782 aa8.56□□□□□ -1.04
CMTM4-205ENST00000581487 RAB3GAP1Q15042 981 aa8.56□□□□□ -1.04
CMTM4-205ENST00000581487 ABTB2Q8N961 1025 aa8.56□□□□□ -1.04
CMTM4-205ENST00000581487 ZBTB12Q9Y330 459 aaPredicted RBP8.56□□□□□ -1.04
CMTM4-205ENST00000581487 ATP2C2O75185 946 aa8.56□□□□□ -1.04
CMTM4-205ENST00000581487 CETN2P41208 172 aa8.56□□□□□ -1.04
CMTM4-205ENST00000581487 PPP4R4Q6NUP7 873 aa8.56□□□□□ -1.04
CMTM4-205ENST00000581487 ACRBPQ8NEB7 543 aa8.56□□□□□ -1.04
CMTM4-205ENST00000581487 NUP133Q8WUM0 1156 aa8.56□□□□□ -1.04
CMTM4-205ENST00000581487 MYCBPQ99417 103 aaPredicted RBP8.56□□□□□ -1.04
CMTM4-205ENST00000581487 TRIM55Q9BYV6 548 aa8.56□□□□□ -1.04
CMTM4-205ENST00000581487 URB2Q14146 1524 aaKnown RBP8.56□□□□□ -1.04
CMTM4-205ENST00000581487 CCDC148Q8NFR7 591 aa8.56□□□□□ -1.04
CMTM4-205ENST00000581487 NUDT16Q96DE0 195 aaKnown RBP8.56□□□□□ -1.04
CMTM4-205ENST00000581487 ZHX3Q9H4I2 956 aa8.56□□□□□ -1.04
CMTM4-205ENST00000581487 RRAGDQ9NQL2 400 aaPredicted RBP8.56□□□□□ -1.04
CMTM4-205ENST00000581487 KIF1BPQ96EK5 621 aa8.56□□□□□ -1.04
CMTM4-205ENST00000581487 LUC7LQ9NQ29 371 aaKnown RBP8.56□□□□□ -1.04
CMTM4-205ENST00000581487 LIMCH1Q9UPQ0 1083 aa8.56□□□□□ -1.04
CMTM4-205ENST00000581487 GLRX3O76003 335 aaKnown RBP8.55□□□□□ -1.04
CMTM4-205ENST00000581487 ATP2B1P20020 1258 aa8.55□□□□□ -1.04
CMTM4-205ENST00000581487 ZNF530Q6P9A1 599 aaPredicted RBP8.55□□□□□ -1.04
CMTM4-205ENST00000581487 SCAND2PQ9GZW5 306 aaPredicted RBP8.55□□□□□ -1.04
CMTM4-205ENST00000581487 SH2B1Q9NRF2 756 aaPredicted RBP8.55□□□□□ -1.04
CMTM4-205ENST00000581487 ITM2BQ9Y287 266 aa8.55□□□□□ -1.04
CMTM4-205ENST00000581487 PIK3C2GO75747 1445 aa8.55□□□□□ -1.04
CMTM4-205ENST00000581487 HMGB1P09429 215 aaKnown RBP8.55□□□□□ -1.04
CMTM4-205ENST00000581487 ZBTB41Q5SVQ8 909 aa8.55□□□□□ -1.04
CMTM4-205ENST00000581487 CEP112Q8N8E3 955 aa8.55□□□□□ -1.04
CMTM4-205ENST00000581487 FERMT2Q96AC1 680 aa8.55□□□□□ -1.04
CMTM4-205ENST00000581487 OGFRQ9NZT2 677 aa8.55□□□□□ -1.04
CMTM4-205ENST00000581487 CBFA2T2O43439 604 aa8.55□□□□□ -1.04
CMTM4-205ENST00000581487 CALCOCO2Q13137 446 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms