RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 ANP32CO43423 234 aa16.48■□□□□ 0.23
CBX1-206ENST00000581003 NPM2Q86SE8 214 aaKnown RBP16.48■□□□□ 0.23
CBX1-206ENST00000581003 ZBTB3Q9H5J0 574 aa16.48■□□□□ 0.23
CBX1-206ENST00000581003 ADCY9O60503 1353 aa16.48■□□□□ 0.23
CBX1-206ENST00000581003 ATP10DQ9P241 1426 aa16.47■□□□□ 0.23
CBX1-206ENST00000581003 C2CD5Q86YS7 1000 aa16.47■□□□□ 0.23
CBX1-206ENST00000581003 SETDB2Q96T68 719 aa16.47■□□□□ 0.23
CBX1-206ENST00000581003 MBIPQ9NS73 344 aa16.47■□□□□ 0.23
CBX1-206ENST00000581003 PIM2Q9P1W9 311 aa16.47■□□□□ 0.23
CBX1-206ENST00000581003 TNRC6CQ9HCJ0 1690 aaKnown RBP16.46■□□□□ 0.23
CBX1-206ENST00000581003 CNBD1Q8NA66 436 aa16.46■□□□□ 0.23
CBX1-206ENST00000581003 ARFGEF1Q9Y6D6 1849 aa16.45■□□□□ 0.22
CBX1-206ENST00000581003 DALRD3Q5D0E6 543 aaKnown RBP16.45■□□□□ 0.22
CBX1-206ENST00000581003 ARHGAP27Q6ZUM4 889 aa16.45■□□□□ 0.22
CBX1-206ENST00000581003 BABAM1Q9NWV8 329 aa16.45■□□□□ 0.22
CBX1-206ENST00000581003 NIP7Q9Y221 180 aaKnown RBP eCLIP16.45■□□□□ 0.22
CBX1-206ENST00000581003 MAP3K15Q6ZN16 1313 aa16.45■□□□□ 0.22
CBX1-206ENST00000581003 UBN2Q6ZU65 1347 aa16.45■□□□□ 0.22
CBX1-206ENST00000581003 ABCC12Q96J65 1359 aa16.44■□□□□ 0.22
CBX1-206ENST00000581003 ZNF853P0CG23 659 aa16.44■□□□□ 0.22
CBX1-206ENST00000581003 GPTP24298 496 aa16.44■□□□□ 0.22
CBX1-206ENST00000581003 ZNF526Q8TF50 670 aaPredicted RBP16.44■□□□□ 0.22
CBX1-206ENST00000581003 RASSF7Q02833 373 aa16.43■□□□□ 0.22
CBX1-206ENST00000581003 CLEC4GQ6UXB4 293 aa16.43■□□□□ 0.22
CBX1-206ENST00000581003 NBPF5PQ86XG9 351 aaPredicted RBP16.43■□□□□ 0.22
CBX1-206ENST00000581003 ZNF428Q96B54 188 aa16.43■□□□□ 0.22
CBX1-206ENST00000581003 CFAP44Q96MT7 982 aa16.43■□□□□ 0.22
CBX1-206ENST00000581003 CHPF2Q9P2E5 772 aa16.43■□□□□ 0.22
CBX1-206ENST00000581003 ZNF219Q9P2Y4 722 aaPredicted RBP16.43■□□□□ 0.22
CBX1-206ENST00000581003 ZNF652Q9Y2D9 606 aa16.43■□□□□ 0.22
CBX1-206ENST00000581003 PRELPP51888 382 aa16.42■□□□□ 0.22
CBX1-206ENST00000581003 KIF6Q6ZMV9 814 aa16.42■□□□□ 0.22
CBX1-206ENST00000581003 NUTM1Q86Y26 1132 aa16.42■□□□□ 0.22
CBX1-206ENST00000581003 BRIP1Q9BX63 1249 aa16.42■□□□□ 0.22
CBX1-206ENST00000581003 NUP98P52948 1817 aa16.42■□□□□ 0.22
CBX1-206ENST00000581003 H0YIN7 160 aa16.41■□□□□ 0.22
CBX1-206ENST00000581003 ELL2O00472 640 aaPredicted RBP16.41■□□□□ 0.22
CBX1-206ENST00000581003 NPHP1O15259 732 aa16.41■□□□□ 0.22
CBX1-206ENST00000581003 AIMP1Q12904 312 aaKnown RBP16.41■□□□□ 0.22
CBX1-206ENST00000581003 SLC51AQ86UW1 340 aa16.41■□□□□ 0.22
CBX1-206ENST00000581003 XAGE3Q8WTP9 111 aa16.41■□□□□ 0.22
CBX1-206ENST00000581003 TSR2Q969E8 191 aaKnown RBP16.41■□□□□ 0.22
CBX1-206ENST00000581003 ZNF622Q969S3 477 aaKnown RBP eCLIP16.41■□□□□ 0.222e-7■□□□□ 10
CBX1-206ENST00000581003 SALL2Q9Y467 1007 aaPredicted RBP16.41■□□□□ 0.22
CBX1-206ENST00000581003 ERBB4Q15303 1308 aa16.41■□□□□ 0.22
CBX1-206ENST00000581003 ST5P78524 1137 aa16.4■□□□□ 0.22
CBX1-206ENST00000581003 HDGFL1Q5TGJ6 251 aa16.4■□□□□ 0.22
CBX1-206ENST00000581003 DUSP27Q5VZP5 1158 aa16.4■□□□□ 0.22
CBX1-206ENST00000581003 IFT57Q9NWB7 429 aa16.4■□□□□ 0.22
CBX1-206ENST00000581003 CACNA1SQ13698 1873 aa16.39■□□□□ 0.22
CBX1-206ENST00000581003 ERVV-1B6SEH8 477 aa16.39■□□□□ 0.21
CBX1-206ENST00000581003 ERFEQ4G0M1 354 aa16.39■□□□□ 0.21
CBX1-206ENST00000581003 SUSD4Q5VX71 490 aa16.39■□□□□ 0.21
CBX1-206ENST00000581003 COPS6Q7L5N1 327 aa16.39■□□□□ 0.21
CBX1-206ENST00000581003 TTLL6Q8N841 843 aa16.39■□□□□ 0.21
CBX1-206ENST00000581003 C8orf58Q8NAV2 365 aa16.39■□□□□ 0.21
CBX1-206ENST00000581003 SRGNP10124 158 aa16.38■□□□□ 0.21
CBX1-206ENST00000581003 PDE6BP35913 854 aa16.38■□□□□ 0.21
CBX1-206ENST00000581003 C9orf131Q5VYM1 1079 aa16.38■□□□□ 0.21
CBX1-206ENST00000581003 C3orf67Q6ZVT6 689 aa16.38■□□□□ 0.21
CBX1-206ENST00000581003 WWC1Q8IX03 1113 aa16.38■□□□□ 0.21
CBX1-206ENST00000581003 ZNF34Q8IZ26 560 aa16.38■□□□□ 0.21
CBX1-206ENST00000581003 FAM9BQ8IZU0 186 aa16.38■□□□□ 0.21
CBX1-206ENST00000581003 TSPYL6Q8N831 410 aa16.38■□□□□ 0.21
CBX1-206ENST00000581003 NFKBIEO00221 500 aa16.37■□□□□ 0.21
CBX1-206ENST00000581003 C21orf2O43822 256 aa16.37■□□□□ 0.21
CBX1-206ENST00000581003 OLFM4Q6UX06 510 aa16.37■□□□□ 0.21
CBX1-206ENST00000581003 GIGYF2Q6Y7W6 1299 aaKnown RBP16.37■□□□□ 0.21
CBX1-206ENST00000581003 DDX21Q9NR30 783 aaKnown RBP eCLIP16.37■□□□□ 0.21
CBX1-206ENST00000581003 SLX4Q8IY92 1834 aa16.37■□□□□ 0.21
CBX1-206ENST00000581003 RGL2O15211 777 aa16.36■□□□□ 0.21
CBX1-206ENST00000581003 NTSR2O95665 410 aa16.36■□□□□ 0.21
CBX1-206ENST00000581003 GNAI1P63096 354 aa16.36■□□□□ 0.21
CBX1-206ENST00000581003 PRPF40BQ6NWY9 871 aaKnown RBP16.36■□□□□ 0.21
CBX1-206ENST00000581003 ANKRD36CQ5JPF3 1778 aa16.36■□□□□ 0.21
CBX1-206ENST00000581003 TCERG1O14776 1098 aaKnown RBP16.35■□□□□ 0.21
CBX1-206ENST00000581003 TPTE2Q6XPS3 522 aa16.35■□□□□ 0.21
CBX1-206ENST00000581003 SYNE4Q8N205 404 aa16.35■□□□□ 0.21
CBX1-206ENST00000581003 RNF181Q9P0P0 153 aa16.35■□□□□ 0.21
CBX1-206ENST00000581003 ARFGEF2Q9Y6D5 1785 aa16.35■□□□□ 0.21
CBX1-206ENST00000581003 KLRG2A4D1S0 409 aaPredicted RBP16.34■□□□□ 0.21
CBX1-206ENST00000581003 STYK1Q6J9G0 422 aa16.34■□□□□ 0.21
CBX1-206ENST00000581003 PHAXQ9H814 394 aaKnown RBP16.34■□□□□ 0.21
CBX1-206ENST00000581003 HOXB7P09629 217 aa16.33■□□□□ 0.2
CBX1-206ENST00000581003 GTF2E1P29083 439 aaPredicted RBP16.33■□□□□ 0.2
CBX1-206ENST00000581003 CALD1Q05682 793 aaKnown RBP16.33■□□□□ 0.2
CBX1-206ENST00000581003 CCDC27Q2M243 656 aa16.33■□□□□ 0.2
CBX1-206ENST00000581003 MASTLQ96GX5 879 aa16.33■□□□□ 0.2
CBX1-206ENST00000581003 GPBP1L1Q9HC44 474 aaPredicted RBP16.33■□□□□ 0.2
CBX1-206ENST00000581003 SPINK5Q9NQ38 1064 aaPredicted RBP16.33■□□□□ 0.2
CBX1-206ENST00000581003 TIAM2Q8IVF5 1701 aa16.33■□□□□ 0.2
CBX1-206ENST00000581003 SBF1O95248 1867 aa16.33■□□□□ 0.2
CBX1-206ENST00000581003 IBTKQ9P2D0 1353 aaPredicted RBP16.32■□□□□ 0.2
CBX1-206ENST00000581003 DBF4Q9UBU7 674 aaPredicted RBP16.32■□□□□ 0.2
CBX1-206ENST00000581003 FANCIQ9NVI1 1328 aa16.31■□□□□ 0.2
CBX1-206ENST00000581003 ATP5J2-PTCD1G3V325 749 aa16.31■□□□□ 0.2
CBX1-206ENST00000581003 NPR1P16066 1061 aa16.31■□□□□ 0.2
CBX1-206ENST00000581003 NLRP10Q86W26 655 aa16.31■□□□□ 0.2
CBX1-206ENST00000581003 C7orf43Q8WVR3 580 aa16.31■□□□□ 0.2
CBX1-206ENST00000581003 NYXQ9GZU5 481 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms