RNA–Protein interactions for RNA: ENST00000579419.5

IFT20-209, Transcript of intraflagellar transport 20, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene IFT20, Length 787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-209ENST00000579419 RASSF10A6NK89 507 aa21.44■■□□□ 1.02
IFT20-209ENST00000579419 CAMTA2O94983 1202 aa21.44■■□□□ 1.02
IFT20-209ENST00000579419 A1BGP04217 495 aa21.44■■□□□ 1.02
IFT20-209ENST00000579419 SETDB2Q96T68 719 aa21.44■■□□□ 1.02
IFT20-209ENST00000579419 ZNF277Q9NRM2 450 aaPredicted RBP21.44■■□□□ 1.02
IFT20-209ENST00000579419 NPHP1O15259 732 aa21.43■■□□□ 1.02
IFT20-209ENST00000579419 EPHX2P34913 555 aa21.43■■□□□ 1.02
IFT20-209ENST00000579419 ST5P78524 1137 aa21.43■■□□□ 1.02
IFT20-209ENST00000579419 DEFB115Q30KQ5 88 aa21.43■■□□□ 1.02
IFT20-209ENST00000579419 SOGA3Q5TF21 947 aa21.43■■□□□ 1.02
IFT20-209ENST00000579419 HACL1Q9UJ83 578 aa21.43■■□□□ 1.02
IFT20-209ENST00000579419 HEG1Q9ULI3 1381 aa21.43■■□□□ 1.02
IFT20-209ENST00000579419 IL6STP40189 918 aaPredicted RBP21.42■■□□□ 1.02
IFT20-209ENST00000579419 CCDC93Q567U6 631 aa21.42■■□□□ 1.02
IFT20-209ENST00000579419 RNF123Q5XPI4 1314 aa21.42■■□□□ 1.02
IFT20-209ENST00000579419 CNTROBQ8N137 903 aa21.42■■□□□ 1.02
IFT20-209ENST00000579419 WDR33Q9C0J8 1336 aaKnown RBP21.42■■□□□ 1.02
IFT20-209ENST00000579419 ADAMTSL1Q8N6G6 1762 aa21.41■■□□□ 1.02
IFT20-209ENST00000579419 CACNA1SQ13698 1873 aa21.41■■□□□ 1.02
IFT20-209ENST00000579419 SCN4AP35499 1836 aa21.41■■□□□ 1.02
IFT20-209ENST00000579419 PIP4K2AP48426 406 aaPredicted RBP21.4■■□□□ 1.02
IFT20-209ENST00000579419 FKBP4Q02790 459 aaKnown RBP eCLIP21.4■■□□□ 1.02
IFT20-209ENST00000579419 ZNF790Q6PG37 636 aa21.4■■□□□ 1.02
IFT20-209ENST00000579419 HSPA5P11021 654 aaKnown RBP21.39■■□□□ 1.01
IFT20-209ENST00000579419 FMR1Q06787 632 aaKnown RBP eCLIP21.39■■□□□ 1.01
IFT20-209ENST00000579419 IL17REQ8NFR9 667 aa21.39■■□□□ 1.01
IFT20-209ENST00000579419 ABT1Q9ULW3 272 aaKnown RBP21.39■■□□□ 1.01
IFT20-209ENST00000579419 MAP2K1Q02750 393 aaPredicted RBP21.38■■□□□ 1.01
IFT20-209ENST00000579419 CCDC85CA6NKD9 419 aa21.37■■□□□ 1.01
IFT20-209ENST00000579419 KCNQ3O43525 872 aa21.37■■□□□ 1.01
IFT20-209ENST00000579419 DZIP3Q86Y13 1208 aaKnown RBP21.37■■□□□ 1.01
IFT20-209ENST00000579419 TEX13AQ9BXU3 409 aaPredicted RBP21.37■■□□□ 1.01
IFT20-209ENST00000579419 KNSTRNQ9Y448 316 aa21.37■■□□□ 1.01
IFT20-209ENST00000579419 ARFGEF2Q9Y6D5 1785 aa21.37■■□□□ 1.01
IFT20-209ENST00000579419 NPR1P16066 1061 aa21.36■■□□□ 1.01
IFT20-209ENST00000579419 AMER1Q5JTC6 1135 aaPredicted RBP21.36■■□□□ 1.01
IFT20-209ENST00000579419 NBPF5PQ86XG9 351 aaPredicted RBP21.36■■□□□ 1.01
IFT20-209ENST00000579419 FZD9O00144 591 aa21.35■■□□□ 1.01
IFT20-209ENST00000579419 MLLT1Q03111 559 aaPredicted RBP21.35■■□□□ 1.01
IFT20-209ENST00000579419 TEFQ10587 303 aa21.35■■□□□ 1.01
IFT20-209ENST00000579419 PNMA8AQ86V59 439 aaPredicted RBP21.35■■□□□ 1.01
IFT20-209ENST00000579419 IARSP41252 1262 aaKnown RBP21.34■■□□□ 1.01
IFT20-209ENST00000579419 GRM1Q13255 1194 aa21.34■■□□□ 1.01
IFT20-209ENST00000579419 FMNL2Q96PY5 1086 aa21.34■■□□□ 1.01
IFT20-209ENST00000579419 DDX21Q9NR30 783 aaKnown RBP eCLIP21.34■■□□□ 1.01
IFT20-209ENST00000579419 TSKSQ9UJT2 592 aa21.34■■□□□ 1.01
IFT20-209ENST00000579419 PRAMEF22A3QJZ6 481 aa21.33■■□□□ 1.01
IFT20-209ENST00000579419 KLRG2A4D1S0 409 aaPredicted RBP21.33■■□□□ 1.01
IFT20-209ENST00000579419 CYP4F22Q6NT55 531 aa21.33■■□□□ 1.01
IFT20-209ENST00000579419 PAXIP1Q6ZW49 1069 aaPredicted RBP21.33■■□□□ 1.01
IFT20-209ENST00000579419 NPM2Q86SE8 214 aaKnown RBP21.33■■□□□ 1.01
IFT20-209ENST00000579419 SYNE4Q8N205 404 aa21.33■■□□□ 1.01
IFT20-209ENST00000579419 USP16Q9Y5T5 823 aa21.33■■□□□ 1.01
IFT20-209ENST00000579419 FAM177BA6PVY3 158 aa21.32■■□□□ 1
IFT20-209ENST00000579419 DIAPH1O60610 1272 aaKnown RBP21.32■■□□□ 1
IFT20-209ENST00000579419 RGS19P49795 217 aa21.32■■□□□ 1
IFT20-209ENST00000579419 EIF4G2P78344 907 aaKnown RBP eCLIP21.32■■□□□ 1
IFT20-209ENST00000579419 CAPNS2Q96L46 248 aa21.32■■□□□ 1
IFT20-209ENST00000579419 BCORQ6W2J9 1755 aa21.32■■□□□ 1
IFT20-209ENST00000579419 GPC2Q8N158 579 aa21.31■■□□□ 1
IFT20-209ENST00000579419 COL4A5P29400 1685 aa21.31■■□□□ 1
IFT20-209ENST00000579419 GNAT3A8MTJ3 354 aa21.3■■□□□ 1
IFT20-209ENST00000579419 RTKN2Q8IZC4 609 aa21.3■■□□□ 1
IFT20-209ENST00000579419 TIMELESSQ9UNS1 1208 aa21.3■■□□□ 1
IFT20-209ENST00000579419 GJA3Q9Y6H8 435 aa21.3■■□□□ 1
IFT20-209ENST00000579419 SNED1Q8TER0 1413 aa21.29■■□□□ 1
IFT20-209ENST00000579419 THSD7BQ9C0I4 1608 aa21.29■■□□□ 1
IFT20-209ENST00000579419 LTBP1Q14766 1721 aa21.29■■□□□ 1
IFT20-209ENST00000579419 TRAF5O00463 557 aa21.29■■□□□ 1
IFT20-209ENST00000579419 SLC51AQ86UW1 340 aa21.29■■□□□ 1
IFT20-209ENST00000579419 CLEC4GQ6UXB4 293 aa21.28■■□□□ 1
IFT20-209ENST00000579419 GPR101Q96P66 508 aaPredicted RBP21.28■■□□□ 1
IFT20-209ENST00000579419 NIP7Q9Y221 180 aaKnown RBP eCLIP21.28■■□□□ 1
IFT20-209ENST00000579419 BTBD11A6QL63 1104 aa21.27■■□□□ 1
IFT20-209ENST00000579419 AOC2O75106 756 aa21.27■■□□□ 1
IFT20-209ENST00000579419 EPS15P42566 896 aa21.27■■□□□ 1
IFT20-209ENST00000579419 CST9Q5W186 159 aa21.27■■□□□ 1
IFT20-209ENST00000579419 SIPA1L3O60292 1781 aaPredicted RBP21.27■■□□□ 1
IFT20-209ENST00000579419 SCNN1DP51172 638 aa21.26■□□□□ 0.99
IFT20-209ENST00000579419 TPTE2Q6XPS3 522 aa21.26■□□□□ 0.99
IFT20-209ENST00000579419 GAS2L2Q8NHY3 880 aa21.26■□□□□ 0.99
IFT20-209ENST00000579419 BEGAINQ9BUH8 593 aa21.26■□□□□ 0.99
IFT20-209ENST00000579419 CEMIPQ8WUJ3 1361 aa21.25■□□□□ 0.99
IFT20-209ENST00000579419 U2SURPO15042 1029 aaKnown RBP21.25■□□□□ 0.99
IFT20-209ENST00000579419 ECE1P42892 770 aa21.25■□□□□ 0.99
IFT20-209ENST00000579419 JDP2Q8WYK2 163 aa21.25■□□□□ 0.99
IFT20-209ENST00000579419 PSMD1Q99460 953 aa21.25■□□□□ 0.99
IFT20-209ENST00000579419 ZNF652Q9Y2D9 606 aa21.25■□□□□ 0.99
IFT20-209ENST00000579419 COL3A1P02461 1466 aaPredicted RBP21.25■□□□□ 0.99
IFT20-209ENST00000579419 NBPF26B4DH59 902 aa21.24■□□□□ 0.99
IFT20-209ENST00000579419 EIF6P56537 245 aaKnown RBP21.24■□□□□ 0.99
IFT20-209ENST00000579419 HLFQ16534 295 aa21.24■□□□□ 0.99
IFT20-209ENST00000579419 NBPF10Q6P3W6 841 aaKnown RBP21.24■□□□□ 0.99
IFT20-209ENST00000579419 NBPF15Q8N660 670 aa21.24■□□□□ 0.99
IFT20-209ENST00000579419 CFAP44Q96MT7 982 aa21.24■□□□□ 0.99
IFT20-209ENST00000579419 TLL2Q9Y6L7 1015 aa21.24■□□□□ 0.99
IFT20-209ENST00000579419 LMOD1P29536 600 aaPredicted RBP21.23■□□□□ 0.99
IFT20-209ENST00000579419 CC2D1BQ5T0F9 858 aaKnown RBP21.23■□□□□ 0.99
IFT20-209ENST00000579419 MCOLN1Q9GZU1 580 aa21.23■□□□□ 0.99
IFT20-209ENST00000579419 PCDH10Q9P2E7 1040 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms