RNA–Protein interactions for RNA: ENST00000579378.1

AC011840.3-201, humanhuman

TSL 3 BASIC

Gene AC011840.3, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011840.3-201ENST00000579378 FOXN1O15353 648 aa11.33□□□□□ -0.6
AC011840.3-201ENST00000579378 SOGA3Q5TF21 947 aa11.33□□□□□ -0.6
AC011840.3-201ENST00000579378 NPM2Q86SE8 214 aaKnown RBP11.33□□□□□ -0.6
AC011840.3-201ENST00000579378 C7orf43Q8WVR3 580 aa11.33□□□□□ -0.6
AC011840.3-201ENST00000579378 FMNL2Q96PY5 1086 aa11.33□□□□□ -0.6
AC011840.3-201ENST00000579378 PASKQ96RG2 1323 aa11.33□□□□□ -0.6
AC011840.3-201ENST00000579378 CNTNAP1P78357 1384 aa11.32□□□□□ -0.6
AC011840.3-201ENST00000579378 KCNQ3O43525 872 aa11.32□□□□□ -0.6
AC011840.3-201ENST00000579378 ITGBL1O95965 494 aaPredicted RBP11.32□□□□□ -0.6
AC011840.3-201ENST00000579378 ST5P78524 1137 aa11.32□□□□□ -0.6
AC011840.3-201ENST00000579378 CC2D1BQ5T0F9 858 aaKnown RBP11.32□□□□□ -0.6
AC011840.3-201ENST00000579378 LDHDQ86WU2 507 aa11.32□□□□□ -0.6
AC011840.3-201ENST00000579378 DZIP3Q86Y13 1208 aaKnown RBP11.32□□□□□ -0.6
AC011840.3-201ENST00000579378 GAS2L2Q8NHY3 880 aa11.32□□□□□ -0.6
AC011840.3-201ENST00000579378 L3MBTL3Q96JM7 780 aaPredicted RBP11.32□□□□□ -0.6
AC011840.3-201ENST00000579378 TAF1DQ9H5J8 278 aaPredicted RBP11.32□□□□□ -0.6
AC011840.3-201ENST00000579378 USP16Q9Y5T5 823 aa11.32□□□□□ -0.6
AC011840.3-201ENST00000579378 IQCA1LA6NCM1 817 aa11.31□□□□□ -0.6
AC011840.3-201ENST00000579378 U2SURPO15042 1029 aaKnown RBP11.31□□□□□ -0.6
AC011840.3-201ENST00000579378 VEGFBP49765 207 aa11.31□□□□□ -0.6
AC011840.3-201ENST00000579378 PRDM10Q9NQV6 1147 aa11.31□□□□□ -0.6
AC011840.3-201ENST00000579378 TMEM88BA6NKF7 163 aa11.3□□□□□ -0.6
AC011840.3-201ENST00000579378 BTBD11A6QL63 1104 aa11.3□□□□□ -0.6
AC011840.3-201ENST00000579378 PIP4K2AP48426 406 aaPredicted RBP11.3□□□□□ -0.6
AC011840.3-201ENST00000579378 CLEC4GQ6UXB4 293 aa11.3□□□□□ -0.6
AC011840.3-201ENST00000579378 BCORQ6W2J9 1755 aa11.3□□□□□ -0.6
AC011840.3-201ENST00000579378 KIF7Q2M1P5 1343 aa11.3□□□□□ -0.6
AC011840.3-201ENST00000579378 KLRG2A4D1S0 409 aaPredicted RBP11.29□□□□□ -0.6
AC011840.3-201ENST00000579378 NPR1P16066 1061 aa11.29□□□□□ -0.6
AC011840.3-201ENST00000579378 CTCFP49711 727 aaPredicted RBP11.29□□□□□ -0.6
AC011840.3-201ENST00000579378 FKBP4Q02790 459 aaKnown RBP eCLIP11.29□□□□□ -0.6
AC011840.3-201ENST00000579378 CCDC93Q567U6 631 aa11.29□□□□□ -0.6
AC011840.3-201ENST00000579378 EAPPQ56P03 285 aaPredicted RBP11.29□□□□□ -0.6
AC011840.3-201ENST00000579378 NBPF5PQ86XG9 351 aaPredicted RBP11.29□□□□□ -0.6
AC011840.3-201ENST00000579378 PHACTR3Q96KR7 559 aa11.29□□□□□ -0.6
AC011840.3-201ENST00000579378 CLEC11AQ9Y240 323 aa11.29□□□□□ -0.6
AC011840.3-201ENST00000579378 CEMIPQ8WUJ3 1361 aa11.28□□□□□ -0.6
AC011840.3-201ENST00000579378 PRAMEF22A3QJZ6 481 aa11.28□□□□□ -0.6
AC011840.3-201ENST00000579378 OLFM4Q6UX06 510 aa11.28□□□□□ -0.6
AC011840.3-201ENST00000579378 TPTE2Q6XPS3 522 aa11.28□□□□□ -0.6
AC011840.3-201ENST00000579378 ZNF277Q9NRM2 450 aaPredicted RBP11.28□□□□□ -0.6
AC011840.3-201ENST00000579378 WBP1LQ9NX94 342 aa11.28□□□□□ -0.6
AC011840.3-201ENST00000579378 HACL1Q9UJ83 578 aa11.28□□□□□ -0.6
AC011840.3-201ENST00000579378 ZNF541Q9H0D2 1346 aa11.28□□□□□ -0.6
AC011840.3-201ENST00000579378 COL3A1P02461 1466 aaPredicted RBP11.27□□□□□ -0.6
AC011840.3-201ENST00000579378 EPHX2P34913 555 aa11.27□□□□□ -0.61
AC011840.3-201ENST00000579378 CNGB1Q14028 1251 aaPredicted RBP11.27□□□□□ -0.61
AC011840.3-201ENST00000579378 DEFB115Q30KQ5 88 aa11.27□□□□□ -0.61
AC011840.3-201ENST00000579378 RTKN2Q8IZC4 609 aa11.27□□□□□ -0.61
AC011840.3-201ENST00000579378 CNTROBQ8N137 903 aa11.27□□□□□ -0.61
AC011840.3-201ENST00000579378 AIDAQ96BJ3 306 aa11.27□□□□□ -0.61
AC011840.3-201ENST00000579378 NIP7Q9Y221 180 aaKnown RBP eCLIP11.27□□□□□ -0.61
AC011840.3-201ENST00000579378 ZNF652Q9Y2D9 606 aa11.27□□□□□ -0.61
AC011840.3-201ENST00000579378 NBPF26B4DH59 902 aa11.26□□□□□ -0.61
AC011840.3-201ENST00000579378 FZD9O00144 591 aa11.26□□□□□ -0.61
AC011840.3-201ENST00000579378 SNRPA1P09661 255 aaKnown RBP11.26□□□□□ -0.61
AC011840.3-201ENST00000579378 ALDH1B1P30837 517 aa11.26□□□□□ -0.61
AC011840.3-201ENST00000579378 LBX1P52954 281 aa11.26□□□□□ -0.61
AC011840.3-201ENST00000579378 NBPF10Q6P3W6 841 aaKnown RBP11.26□□□□□ -0.61
AC011840.3-201ENST00000579378 PNMA8AQ86V59 439 aaPredicted RBP11.26□□□□□ -0.61
AC011840.3-201ENST00000579378 SYNE4Q8N205 404 aa11.26□□□□□ -0.61
AC011840.3-201ENST00000579378 NBPF15Q8N660 670 aa11.26□□□□□ -0.61
AC011840.3-201ENST00000579378 ADAMTSL1Q8N6G6 1762 aa11.26□□□□□ -0.61
AC011840.3-201ENST00000579378 RASSF10A6NK89 507 aa11.25□□□□□ -0.61
AC011840.3-201ENST00000579378 FAM177BA6PVY3 158 aa11.25□□□□□ -0.61
AC011840.3-201ENST00000579378 PRKAR2BP31323 418 aa11.25□□□□□ -0.61
AC011840.3-201ENST00000579378 IARSP41252 1262 aaKnown RBP11.25□□□□□ -0.61
AC011840.3-201ENST00000579378 MAP1SQ66K74 1059 aaPredicted RBP11.25□□□□□ -0.61
AC011840.3-201ENST00000579378 RSPH6AQ9H0K4 717 aa11.25□□□□□ -0.61
AC011840.3-201ENST00000579378 RNF123Q5XPI4 1314 aa11.25□□□□□ -0.61
AC011840.3-201ENST00000579378 NUP98P52948 1817 aa11.24□□□□□ -0.61
AC011840.3-201ENST00000579378 RGL2O15211 777 aa11.24□□□□□ -0.61
AC011840.3-201ENST00000579378 HLFQ16534 295 aa11.24□□□□□ -0.61
AC011840.3-201ENST00000579378 GPC2Q8N158 579 aa11.24□□□□□ -0.61
AC011840.3-201ENST00000579378 WDR33Q9C0J8 1336 aaKnown RBP11.24□□□□□ -0.61
AC011840.3-201ENST00000579378 NPC1L1Q9UHC9 1359 aa11.24□□□□□ -0.61
AC011840.3-201ENST00000579378 HSPA8P11142 646 aaKnown RBP11.23□□□□□ -0.61
AC011840.3-201ENST00000579378 GTF2E1P29083 439 aaPredicted RBP11.23□□□□□ -0.61
AC011840.3-201ENST00000579378 MCM10Q7L590 875 aa11.23□□□□□ -0.61
AC011840.3-201ENST00000579378 JDP2Q8WYK2 163 aa11.23□□□□□ -0.61
AC011840.3-201ENST00000579378 RTF1Q92541 710 aaKnown RBP11.23□□□□□ -0.61
AC011840.3-201ENST00000579378 MAP2K1Q02750 393 aaPredicted RBP11.22□□□□□ -0.61
AC011840.3-201ENST00000579378 DCTN1Q14203 1278 aa11.22□□□□□ -0.61
AC011840.3-201ENST00000579378 ABHD8Q96I13 439 aa11.22□□□□□ -0.61
AC011840.3-201ENST00000579378 TRPM7Q96QT4 1865 aa11.22□□□□□ -0.61
AC011840.3-201ENST00000579378 PSMD1Q99460 953 aa11.22□□□□□ -0.61
AC011840.3-201ENST00000579378 SNED1Q8TER0 1413 aa11.21□□□□□ -0.61
AC011840.3-201ENST00000579378 FMR1Q06787 632 aaKnown RBP eCLIP11.21□□□□□ -0.61
AC011840.3-201ENST00000579378 CRY2Q49AN0 593 aa11.21□□□□□ -0.61
AC011840.3-201ENST00000579378 CC2D2BQ6DHV5 1058 aa11.21□□□□□ -0.61
AC011840.3-201ENST00000579378 CCER1Q8TC90 406 aaPredicted RBP11.21□□□□□ -0.61
AC011840.3-201ENST00000579378 DDX21Q9NR30 783 aaKnown RBP eCLIP11.21□□□□□ -0.61
AC011840.3-201ENST00000579378 ABT1Q9ULW3 272 aaKnown RBP11.21□□□□□ -0.61
AC011840.3-201ENST00000579378 GJA3Q9Y6H8 435 aa11.21□□□□□ -0.61
AC011840.3-201ENST00000579378 HTATSF1O43719 755 aaKnown RBP11.2□□□□□ -0.62
AC011840.3-201ENST00000579378 EPS15P42566 896 aa11.2□□□□□ -0.62
AC011840.3-201ENST00000579378 EIF6P56537 245 aaKnown RBP11.2□□□□□ -0.62
AC011840.3-201ENST00000579378 TAF7Q15545 349 aaPredicted RBP11.2□□□□□ -0.62
AC011840.3-201ENST00000579378 NUTM1Q86Y26 1132 aa11.2□□□□□ -0.62
AC011840.3-201ENST00000579378 NGEFQ8N5V2 710 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms