RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 IGKV5-2P06315 115 aa25.16■■□□□ 1.62
SMG8-203ENST00000578922 TTLL7Q6ZT98 887 aa25.16■■□□□ 1.62
SMG8-203ENST00000578922 SLC4A9Q96Q91 983 aa25.16■■□□□ 1.62
SMG8-203ENST00000578922 ERBB4Q15303 1308 aa25.16■■□□□ 1.62
SMG8-203ENST00000578922 ATP8B2P98198 1209 aa25.15■■□□□ 1.62
SMG8-203ENST00000578922 NEXNQ0ZGT2 675 aa25.15■■□□□ 1.62
SMG8-203ENST00000578922 METTL22Q9BUU2 404 aaPredicted RBP25.15■■□□□ 1.62
SMG8-203ENST00000578922 VSIG10Q8N0Z9 540 aa25.14■■□□□ 1.62
SMG8-203ENST00000578922 KCNQ2O43526 872 aa25.13■■□□□ 1.61
SMG8-203ENST00000578922 SMARCA5O60264 1052 aaPredicted RBP25.13■■□□□ 1.61
SMG8-203ENST00000578922 EXOC6BQ9Y2D4 811 aa25.13■■□□□ 1.61
SMG8-203ENST00000578922 ATP5J2-PTCD1G3V325 749 aa25.12■■□□□ 1.61
SMG8-203ENST00000578922 NEURL1BA8MQ27 555 aa25.12■■□□□ 1.61
SMG8-203ENST00000578922 PLBD2Q8NHP8 589 aa25.12■■□□□ 1.61
SMG8-203ENST00000578922 TEX13AQ9BXU3 409 aaPredicted RBP25.12■■□□□ 1.61
SMG8-203ENST00000578922 STARD3NLO95772 234 aa25.11■■□□□ 1.61
SMG8-203ENST00000578922 PPP1R42Q7Z4L9 355 aa25.11■■□□□ 1.61
SMG8-203ENST00000578922 ZBTB3Q9H5J0 574 aa25.11■■□□□ 1.61
SMG8-203ENST00000578922 GRM8O00222 908 aa25.11■■□□□ 1.61
SMG8-203ENST00000578922 FAM182BQ5T319 152 aa25.1■■□□□ 1.61
SMG8-203ENST00000578922 C16orf71Q8IYS4 520 aaPredicted RBP25.1■■□□□ 1.61
SMG8-203ENST00000578922 JARID2Q92833 1246 aaPredicted RBP25.1■■□□□ 1.61
SMG8-203ENST00000578922 ARXQ96QS3 562 aa25.1■■□□□ 1.61
SMG8-203ENST00000578922 SRGAP3O43295 1099 aa25.09■■□□□ 1.61
SMG8-203ENST00000578922 GJD4Q96KN9 370 aaPredicted RBP25.09■■□□□ 1.61
SMG8-203ENST00000578922 GCKRQ14397 625 aa25.08■■□□□ 1.61
SMG8-203ENST00000578922 ARFGEF2Q9Y6D5 1785 aa25.08■■□□□ 1.61
SMG8-203ENST00000578922 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.08■■□□□ 1.61
SMG8-203ENST00000578922 SUCLG2Q96I99 432 aa25.08■■□□□ 1.61
SMG8-203ENST00000578922 CYP19A1P11511 503 aaPredicted RBP25.07■■□□□ 1.6
SMG8-203ENST00000578922 NFKBIBQ15653 356 aa25.07■■□□□ 1.6
SMG8-203ENST00000578922 SSH3Q8TE77 659 aa25.06■■□□□ 1.6
SMG8-203ENST00000578922 OTUD7AQ8TE49 926 aaPredicted RBP25.05■■□□□ 1.6
SMG8-203ENST00000578922 ZBTB1Q9Y2K1 713 aa25.05■■□□□ 1.6
SMG8-203ENST00000578922 SLC4A3P48751 1232 aa25.04■■□□□ 1.6
SMG8-203ENST00000578922 PTF1AQ7RTS3 328 aa25.04■■□□□ 1.6
SMG8-203ENST00000578922 KAZALD1Q96I82 304 aa25.04■■□□□ 1.6
SMG8-203ENST00000578922 UTYO14607 1347 aa25.04■■□□□ 1.6
SMG8-203ENST00000578922 ATP6V1AP38606 617 aa25.04■■□□□ 1.6
SMG8-203ENST00000578922 POLA2Q14181 598 aa25.04■■□□□ 1.6
SMG8-203ENST00000578922 BICC1Q9H694 974 aaKnown RBP25.03■■□□□ 1.6
SMG8-203ENST00000578922 TRPC5Q9UL62 973 aaPredicted RBP25.03■■□□□ 1.6
SMG8-203ENST00000578922 AFDNP55196 1824 aaKnown RBP25.03■■□□□ 1.6
SMG8-203ENST00000578922 PALLDQ8WX93 1383 aa25.03■■□□□ 1.6
SMG8-203ENST00000578922 LOC102724428A0A0B4J2F2 783 aa25.03■■□□□ 1.6
SMG8-203ENST00000578922 SURF6O75683 361 aaKnown RBP25.03■■□□□ 1.6
SMG8-203ENST00000578922 SIK1P57059 783 aa25.03■■□□□ 1.6
SMG8-203ENST00000578922 UBE3BQ7Z3V4 1068 aa25.02■■□□□ 1.6
SMG8-203ENST00000578922 A0A087WZG4 1122 aa25.01■■□□□ 1.59
SMG8-203ENST00000578922 PLEKHM2Q8IWE5 1019 aa25.01■■□□□ 1.59
SMG8-203ENST00000578922 THSD7AQ9UPZ6 1657 aa25.01■■□□□ 1.59
SMG8-203ENST00000578922 TJP1Q07157 1748 aa25.01■■□□□ 1.59
SMG8-203ENST00000578922 KIF6Q6ZMV9 814 aa25.01■■□□□ 1.59
SMG8-203ENST00000578922 LRRCC1Q9C099 1032 aa25.01■■□□□ 1.59
SMG8-203ENST00000578922 HDAC5Q9UQL6 1122 aa25.01■■□□□ 1.59
SMG8-203ENST00000578922 IBTKQ9P2D0 1353 aaPredicted RBP25■■□□□ 1.59
SMG8-203ENST00000578922 SEC24BO95487 1268 aa25■■□□□ 1.59
SMG8-203ENST00000578922 QTRT2Q9H974 415 aaKnown RBP25■■□□□ 1.59
SMG8-203ENST00000578922 NUP188Q5SRE5 1749 aa25■■□□□ 1.59
SMG8-203ENST00000578922 ATRNO75882 1429 aa25■■□□□ 1.59
SMG8-203ENST00000578922 ITPK1Q13572 414 aa24.99■■□□□ 1.59
SMG8-203ENST00000578922 EPHA10Q5JZY3 1008 aa24.99■■□□□ 1.59
SMG8-203ENST00000578922 MTX1Q13505 466 aa24.98■■□□□ 1.59
SMG8-203ENST00000578922 BECN1Q14457 450 aa24.98■■□□□ 1.59
SMG8-203ENST00000578922 SEPT12Q8IYM1 358 aa24.98■■□□□ 1.59
SMG8-203ENST00000578922 PA2G4Q9UQ80 394 aaKnown RBP24.98■■□□□ 1.59
SMG8-203ENST00000578922 KCNQ4P56696 695 aa24.97■■□□□ 1.59
SMG8-203ENST00000578922 GSE1Q14687 1217 aa24.97■■□□□ 1.59
SMG8-203ENST00000578922 IL1RAPL2Q9NP60 686 aa24.97■■□□□ 1.59
SMG8-203ENST00000578922 CWC25Q9NXE8 425 aaPredicted RBP24.97■■□□□ 1.59
SMG8-203ENST00000578922 SMARCC1Q92922 1105 aaPredicted RBP24.97■■□□□ 1.59
SMG8-203ENST00000578922 CRKLP46109 303 aaKnown RBP24.96■■□□□ 1.59
SMG8-203ENST00000578922 UPF2Q9HAU5 1272 aaKnown RBP24.95■■□□□ 1.59
SMG8-203ENST00000578922 TBC1D2BQ9UPU7 963 aa24.95■■□□□ 1.59
SMG8-203ENST00000578922 MAP3K15Q6ZN16 1313 aa24.95■■□□□ 1.58
SMG8-203ENST00000578922 OS9Q13438 667 aaPredicted RBP24.95■■□□□ 1.58
SMG8-203ENST00000578922 HLFQ16534 295 aa24.95■■□□□ 1.58
SMG8-203ENST00000578922 INTS5Q6P9B9 1019 aaKnown RBP24.95■■□□□ 1.58
SMG8-203ENST00000578922 TCIRG1Q13488 830 aa24.94■■□□□ 1.58
SMG8-203ENST00000578922 BMP2KLQ5H9B9 411 aa24.94■■□□□ 1.58
SMG8-203ENST00000578922 CCDC87Q9NVE4 849 aa24.94■■□□□ 1.58
SMG8-203ENST00000578922 TSHZ3Q63HK5 1081 aa24.94■■□□□ 1.58
SMG8-203ENST00000578922 GSPT1P15170 499 aaKnown RBP24.93■■□□□ 1.58
SMG8-203ENST00000578922 IL6STP40189 918 aaPredicted RBP24.93■■□□□ 1.58
SMG8-203ENST00000578922 CASP7P55210 303 aa24.93■■□□□ 1.58
SMG8-203ENST00000578922 CCDC191Q8NCU4 936 aa24.93■■□□□ 1.58
SMG8-203ENST00000578922 ONECUT3O60422 494 aaPredicted RBP24.93■■□□□ 1.58
SMG8-203ENST00000578922 KLHDC4Q8TBB5 520 aa24.93■■□□□ 1.58
SMG8-203ENST00000578922 RHPN1Q8TCX5 695 aa24.93■■□□□ 1.58
SMG8-203ENST00000578922 H7C1W4 665 aa24.92■■□□□ 1.58
SMG8-203ENST00000578922 RAB11FIP3O75154 756 aa24.92■■□□□ 1.58
SMG8-203ENST00000578922 GPTP24298 496 aa24.92■■□□□ 1.58
SMG8-203ENST00000578922 DZIP3Q86Y13 1208 aaKnown RBP24.92■■□□□ 1.58
SMG8-203ENST00000578922 ISCA1Q9BUE6 129 aa24.92■■□□□ 1.58
SMG8-203ENST00000578922 TTC22Q5TAA0 569 aa24.91■■□□□ 1.58
SMG8-203ENST00000578922 GIGYF2Q6Y7W6 1299 aaKnown RBP24.91■■□□□ 1.58
SMG8-203ENST00000578922 SIL1Q9H173 461 aa24.91■■□□□ 1.58
SMG8-203ENST00000578922 NUTM1Q86Y26 1132 aa24.9■■□□□ 1.58
SMG8-203ENST00000578922 KIF1BPQ96EK5 621 aa24.9■■□□□ 1.58
SMG8-203ENST00000578922 PDE1AP54750 535 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms