RNA–Protein interactions for RNA: ENST00000574997.1

TRIM25-209, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-209ENST00000574997 NFKBIEO00221 500 aa8.62□□□□□ -1.03
TRIM25-209ENST00000574997 C21orf2O43822 256 aa8.62□□□□□ -1.03
TRIM25-209ENST00000574997 CAMTA2O94983 1202 aa8.62□□□□□ -1.03
TRIM25-209ENST00000574997 A1BGP04217 495 aa8.62□□□□□ -1.03
TRIM25-209ENST00000574997 ALDH1B1P30837 517 aa8.62□□□□□ -1.03
TRIM25-209ENST00000574997 PRKAR2BP31323 418 aa8.62□□□□□ -1.03
TRIM25-209ENST00000574997 PRELPP51888 382 aa8.62□□□□□ -1.03
TRIM25-209ENST00000574997 TAF7Q15545 349 aaPredicted RBP8.62□□□□□ -1.03
TRIM25-209ENST00000574997 RTKN2Q8IZC4 609 aa8.62□□□□□ -1.03
TRIM25-209ENST00000574997 RSPH6AQ9H0K4 717 aa8.62□□□□□ -1.03
TRIM25-209ENST00000574997 ZNF330Q9Y3S2 320 aaPredicted RBP8.62□□□□□ -1.03
TRIM25-209ENST00000574997 SIPA1L3O60292 1781 aaPredicted RBP8.62□□□□□ -1.03
TRIM25-209ENST00000574997 COL3A1P02461 1466 aaPredicted RBP8.62□□□□□ -1.03
TRIM25-209ENST00000574997 DICER1Q9UPY3 1922 aaKnown RBP8.62□□□□□ -1.03
TRIM25-209ENST00000574997 CCDC88AQ3V6T2 1871 aa8.62□□□□□ -1.03
TRIM25-209ENST00000574997 TIAM2Q8IVF5 1701 aa8.61□□□□□ -1.03
TRIM25-209ENST00000574997 U2AF1L5P0DN76 240 aaPredicted RBP8.61□□□□□ -1.03
TRIM25-209ENST00000574997 NPR1P16066 1061 aa8.61□□□□□ -1.03
TRIM25-209ENST00000574997 U2AF1Q01081 240 aaKnown RBP eCLIP8.61□□□□□ -1.033e-11■■■■□ 22.7
TRIM25-209ENST00000574997 RASSF7Q02833 373 aa8.61□□□□□ -1.03
TRIM25-209ENST00000574997 NBPF5PQ86XG9 351 aaPredicted RBP8.61□□□□□ -1.03
TRIM25-209ENST00000574997 PHACTR3Q96KR7 559 aa8.61□□□□□ -1.03
TRIM25-209ENST00000574997 USP16Q9Y5T5 823 aa8.61□□□□□ -1.03
TRIM25-209ENST00000574997 FER1L6Q2WGJ9 1857 aa8.6□□□□□ -1.03
TRIM25-209ENST00000574997 ERVV-1B6SEH8 477 aa8.6□□□□□ -1.03
TRIM25-209ENST00000574997 HSPA1AP0DMV8 641 aaKnown RBP8.6□□□□□ -1.03
TRIM25-209ENST00000574997 HSPA1BP0DMV9 641 aaKnown RBP8.6□□□□□ -1.03
TRIM25-209ENST00000574997 CCDC93Q567U6 631 aa8.6□□□□□ -1.03
TRIM25-209ENST00000574997 CC2D2BQ6DHV5 1058 aa8.6□□□□□ -1.03
TRIM25-209ENST00000574997 CHADLQ6NUI6 762 aa8.6□□□□□ -1.03
TRIM25-209ENST00000574997 PRPF40BQ6NWY9 871 aaKnown RBP8.6□□□□□ -1.03
TRIM25-209ENST00000574997 NYXQ9GZU5 481 aa8.6□□□□□ -1.03
TRIM25-209ENST00000574997 CREBZFQ9NS37 354 aa8.6□□□□□ -1.03
TRIM25-209ENST00000574997 SCN7AQ01118 1682 aa8.59□□□□□ -1.03
TRIM25-209ENST00000574997 POTECB2RU33 542 aa8.59□□□□□ -1.03
TRIM25-209ENST00000574997 GTF2E1P29083 439 aaPredicted RBP8.59□□□□□ -1.03
TRIM25-209ENST00000574997 PPP2R1AP30153 589 aa8.59□□□□□ -1.03
TRIM25-209ENST00000574997 C7orf43Q8WVR3 580 aa8.59□□□□□ -1.03
TRIM25-209ENST00000574997 L3MBTL3Q96JM7 780 aaPredicted RBP8.59□□□□□ -1.03
TRIM25-209ENST00000574997 ANKRD31Q8N7Z5 1873 aa8.58□□□□□ -1.04
TRIM25-209ENST00000574997 FKBP4Q02790 459 aaKnown RBP eCLIP8.58□□□□□ -1.04
TRIM25-209ENST00000574997 NCBP3Q53F19 620 aaKnown RBP8.58□□□□□ -1.04
TRIM25-209ENST00000574997 PNMA8AQ86V59 439 aaPredicted RBP8.58□□□□□ -1.04
TRIM25-209ENST00000574997 LDHDQ86WU2 507 aa8.58□□□□□ -1.04
TRIM25-209ENST00000574997 VPS33BQ9H267 617 aa8.58□□□□□ -1.04
TRIM25-209ENST00000574997 NIP7Q9Y221 180 aaKnown RBP eCLIP8.58□□□□□ -1.04
TRIM25-209ENST00000574997 ARFGEF2Q9Y6D5 1785 aa8.58□□□□□ -1.04
TRIM25-209ENST00000574997 SCN4AP35499 1836 aa8.57□□□□□ -1.04
TRIM25-209ENST00000574997 KCNQ3O43525 872 aa8.57□□□□□ -1.04
TRIM25-209ENST00000574997 NPM3O75607 178 aaKnown RBP8.57□□□□□ -1.04
TRIM25-209ENST00000574997 MCM10Q7L590 875 aa8.57□□□□□ -1.04
TRIM25-209ENST00000574997 BABAM1Q9NWV8 329 aa8.57□□□□□ -1.04
TRIM25-209ENST00000574997 ERBB4Q15303 1308 aa8.56□□□□□ -1.04
TRIM25-209ENST00000574997 BCORQ6W2J9 1755 aa8.56□□□□□ -1.04
TRIM25-209ENST00000574997 DDNO94850 711 aaPredicted RBP8.56□□□□□ -1.04
TRIM25-209ENST00000574997 CNGB1Q14028 1251 aaPredicted RBP8.56□□□□□ -1.04
TRIM25-209ENST00000574997 JDP2Q8WYK2 163 aa8.56□□□□□ -1.04
TRIM25-209ENST00000574997 PSMD1Q99460 953 aa8.56□□□□□ -1.04
TRIM25-209ENST00000574997 TMX4Q9H1E5 349 aaPredicted RBP8.56□□□□□ -1.04
TRIM25-209ENST00000574997 ZNF219Q9P2Y4 722 aaPredicted RBP8.56□□□□□ -1.04
TRIM25-209ENST00000574997 SLX4Q8IY92 1834 aa8.56□□□□□ -1.04
TRIM25-209ENST00000574997 NBPF26B4DH59 902 aa8.55□□□□□ -1.04
TRIM25-209ENST00000574997 FZD9O00144 591 aa8.55□□□□□ -1.04
TRIM25-209ENST00000574997 HOXA10P31260 410 aaPredicted RBP8.55□□□□□ -1.04
TRIM25-209ENST00000574997 CRY2Q49AN0 593 aa8.55□□□□□ -1.04
TRIM25-209ENST00000574997 NBPF10Q6P3W6 841 aaKnown RBP8.55□□□□□ -1.04
TRIM25-209ENST00000574997 KIF6Q6ZMV9 814 aa8.55□□□□□ -1.04
TRIM25-209ENST00000574997 PPP1R42Q7Z4L9 355 aa8.55□□□□□ -1.04
TRIM25-209ENST00000574997 GPC2Q8N158 579 aa8.55□□□□□ -1.04
TRIM25-209ENST00000574997 CCDC24Q8N4L8 307 aa8.55□□□□□ -1.04
TRIM25-209ENST00000574997 NBPF15Q8N660 670 aa8.55□□□□□ -1.04
TRIM25-209ENST00000574997 TAF1DQ9H5J8 278 aaPredicted RBP8.55□□□□□ -1.04
TRIM25-209ENST00000574997 HACL1Q9UJ83 578 aa8.55□□□□□ -1.04
TRIM25-209ENST00000574997 IBTKQ9P2D0 1353 aaPredicted RBP8.55□□□□□ -1.04
TRIM25-209ENST00000574997 MAP3K15Q6ZN16 1313 aa8.54□□□□□ -1.04
TRIM25-209ENST00000574997 TMEM88BA6NKF7 163 aa8.54□□□□□ -1.04
TRIM25-209ENST00000574997 IARSP41252 1262 aaKnown RBP8.54□□□□□ -1.04
TRIM25-209ENST00000574997 PARP10Q53GL7 1025 aa8.54□□□□□ -1.04
TRIM25-209ENST00000574997 SYNE4Q8N205 404 aa8.54□□□□□ -1.04
TRIM25-209ENST00000574997 RBM17Q96I25 401 aaKnown RBP8.54□□□□□ -1.04
TRIM25-209ENST00000574997 CRAMP1Q96RY5 1269 aa8.54□□□□□ -1.04
TRIM25-209ENST00000574997 RIC1Q4ADV7 1423 aa8.54□□□□□ -1.04
TRIM25-209ENST00000574997 RNF123Q5XPI4 1314 aa8.54□□□□□ -1.04
TRIM25-209ENST00000574997 PASKQ96RG2 1323 aa8.54□□□□□ -1.04
TRIM25-209ENST00000574997 MAPK8IP3Q9UPT6 1336 aa8.54□□□□□ -1.04
TRIM25-209ENST00000574997 PRAMEF22A3QJZ6 481 aa8.53□□□□□ -1.04
TRIM25-209ENST00000574997 EPHX2P34913 555 aa8.53□□□□□ -1.04
TRIM25-209ENST00000574997 EIF6P56537 245 aaKnown RBP8.53□□□□□ -1.04
TRIM25-209ENST00000574997 EIF4A1P60842 406 aaKnown RBP8.53□□□□□ -1.04
TRIM25-209ENST00000574997 LMOD3Q0VAK6 560 aa8.53□□□□□ -1.04
TRIM25-209ENST00000574997 DCTN1Q14203 1278 aa8.53□□□□□ -1.04
TRIM25-209ENST00000574997 NFE2L2Q16236 605 aa8.53□□□□□ -1.04
TRIM25-209ENST00000574997 HLFQ16534 295 aa8.53□□□□□ -1.04
TRIM25-209ENST00000574997 GIGYF2Q6Y7W6 1299 aaKnown RBP8.53□□□□□ -1.04
TRIM25-209ENST00000574997 RPGRQ92834 1020 aaKnown RBP8.53□□□□□ -1.04
TRIM25-209ENST00000574997 NLRP3Q96P20 1036 aa8.53□□□□□ -1.04
TRIM25-209ENST00000574997 PLEKHF1Q96S99 279 aa8.53□□□□□ -1.04
TRIM25-209ENST00000574997 PRDM10Q9NQV6 1147 aa8.53□□□□□ -1.04
TRIM25-209ENST00000574997 COL11A2P13942 1736 aaPredicted RBP8.53□□□□□ -1.04
TRIM25-209ENST00000574997 ITGBL1O95965 494 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms