RNA–Protein interactions for RNA: ENST00000574379.2

NCBP3-203, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-203ENST00000574379 CASP8AP2Q9UKL3 1982 aa13.34□□□□□ -0.27
NCBP3-203ENST00000574379 CNTNAP4Q9C0A0 1308 aa13.34□□□□□ -0.27
NCBP3-203ENST00000574379 USP42Q9H9J4 1324 aaKnown RBP13.34□□□□□ -0.27
NCBP3-203ENST00000574379 SIPA1L3O60292 1781 aaPredicted RBP13.33□□□□□ -0.28
NCBP3-203ENST00000574379 U2SURPO15042 1029 aaKnown RBP13.33□□□□□ -0.28
NCBP3-203ENST00000574379 ZPR1O75312 459 aa13.33□□□□□ -0.28
NCBP3-203ENST00000574379 AMOTQ4VCS5 1084 aa13.33□□□□□ -0.28
NCBP3-203ENST00000574379 TAOK3Q9H2K8 898 aa13.33□□□□□ -0.28
NCBP3-203ENST00000574379 HACL1Q9UJ83 578 aa13.33□□□□□ -0.28
NCBP3-203ENST00000574379 EPHX2P34913 555 aa13.32□□□□□ -0.28
NCBP3-203ENST00000574379 ZNF530Q6P9A1 599 aaPredicted RBP13.32□□□□□ -0.28
NCBP3-203ENST00000574379 NBPF15Q8N660 670 aa13.32□□□□□ -0.28
NCBP3-203ENST00000574379 MYBBP1AQ9BQG0 1328 aaKnown RBP13.32□□□□□ -0.28
NCBP3-203ENST00000574379 CA12O43570 354 aa13.31□□□□□ -0.28
NCBP3-203ENST00000574379 USPL1Q5W0Q7 1092 aa13.31□□□□□ -0.28
NCBP3-203ENST00000574379 SLC4A9Q96Q91 983 aa13.31□□□□□ -0.28
NCBP3-203ENST00000574379 DDX21Q9NR30 783 aaKnown RBP eCLIP13.31□□□□□ -0.28
NCBP3-203ENST00000574379 NUDCQ9Y266 331 aa13.31□□□□□ -0.28
NCBP3-203ENST00000574379 LTBP1Q14766 1721 aa13.3□□□□□ -0.28
NCBP3-203ENST00000574379 PNMA8AQ86V59 439 aaPredicted RBP13.3□□□□□ -0.28
NCBP3-203ENST00000574379 PRKRIP1Q9H875 184 aaPredicted RBP13.3□□□□□ -0.28
NCBP3-203ENST00000574379 ZNF831Q5JPB2 1677 aa13.3□□□□□ -0.28
NCBP3-203ENST00000574379 SCN4AP35499 1836 aa13.29□□□□□ -0.28
NCBP3-203ENST00000574379 DICER1Q9UPY3 1922 aaKnown RBP13.29□□□□□ -0.28
NCBP3-203ENST00000574379 DLL1O00548 723 aa13.29□□□□□ -0.28
NCBP3-203ENST00000574379 PTCD1O75127 700 aaKnown RBP13.29□□□□□ -0.28
NCBP3-203ENST00000574379 TM4SF1P30408 202 aa13.29□□□□□ -0.28
NCBP3-203ENST00000574379 CRKLP46109 303 aaKnown RBP13.29□□□□□ -0.28
NCBP3-203ENST00000574379 HABP4Q5JVS0 413 aaKnown RBP13.29□□□□□ -0.28
NCBP3-203ENST00000574379 RSPH6AQ9H0K4 717 aa13.29□□□□□ -0.28
NCBP3-203ENST00000574379 MRC1P22897 1456 aa13.29□□□□□ -0.28
NCBP3-203ENST00000574379 THSD7BQ9C0I4 1608 aa13.28□□□□□ -0.28
NCBP3-203ENST00000574379 SERPINB2P05120 415 aa13.28□□□□□ -0.28
NCBP3-203ENST00000574379 HSP90AB1P08238 724 aaKnown RBP13.28□□□□□ -0.28
NCBP3-203ENST00000574379 U2AF1L5P0DN76 240 aaPredicted RBP13.28□□□□□ -0.28
NCBP3-203ENST00000574379 MAP2K2P36507 400 aa13.28□□□□□ -0.28
NCBP3-203ENST00000574379 U2AF1Q01081 240 aaKnown RBP eCLIP13.28□□□□□ -0.28
NCBP3-203ENST00000574379 FMR1Q06787 632 aaKnown RBP eCLIP13.28□□□□□ -0.28
NCBP3-203ENST00000574379 MTHFSDQ2M296 383 aaKnown RBP13.28□□□□□ -0.28
NCBP3-203ENST00000574379 C1orf141Q5JVX7 400 aa13.28□□□□□ -0.28
NCBP3-203ENST00000574379 RNF123Q5XPI4 1314 aa13.28□□□□□ -0.28
NCBP3-203ENST00000574379 COL5A3P25940 1745 aaPredicted RBP13.27□□□□□ -0.28
NCBP3-203ENST00000574379 UBR2Q8IWV8 1755 aa13.27□□□□□ -0.28
NCBP3-203ENST00000574379 DLEC1Q9Y238 1755 aa13.27□□□□□ -0.28
NCBP3-203ENST00000574379 PRKAR2BP31323 418 aa13.27□□□□□ -0.29
NCBP3-203ENST00000574379 AKAP4Q5JQC9 854 aa13.27□□□□□ -0.29
NCBP3-203ENST00000574379 BICDL1Q6ZP65 573 aa13.27□□□□□ -0.29
NCBP3-203ENST00000574379 L3MBTL3Q96JM7 780 aaPredicted RBP13.27□□□□□ -0.29
NCBP3-203ENST00000574379 ERVV-2B6SEH9 535 aa13.26□□□□□ -0.29
NCBP3-203ENST00000574379 MKRN4PQ13434 485 aaPredicted RBP13.26□□□□□ -0.29
NCBP3-203ENST00000574379 NFIXQ14938 502 aa13.26□□□□□ -0.29
NCBP3-203ENST00000574379 AFDNP55196 1824 aaKnown RBP13.25□□□□□ -0.29
NCBP3-203ENST00000574379 CARMIL3Q8ND23 1372 aa13.25□□□□□ -0.29
NCBP3-203ENST00000574379 ZNF541Q9H0D2 1346 aa13.25□□□□□ -0.29
NCBP3-203ENST00000574379 CIAPIN1Q6FI81 312 aa13.25□□□□□ -0.29
NCBP3-203ENST00000574379 PHACTR3Q96KR7 559 aa13.25□□□□□ -0.29
NCBP3-203ENST00000574379 TJP1Q07157 1748 aa13.25□□□□□ -0.29
NCBP3-203ENST00000574379 NPHP1O15259 732 aa13.24□□□□□ -0.29
NCBP3-203ENST00000574379 CCDC24Q8N4L8 307 aa13.24□□□□□ -0.29
NCBP3-203ENST00000574379 GAS2L2Q8NHY3 880 aa13.24□□□□□ -0.29
NCBP3-203ENST00000574379 MYH14Q7Z406 1995 aaKnown RBP13.23□□□□□ -0.29
NCBP3-203ENST00000574379 FER1L6Q2WGJ9 1857 aa13.23□□□□□ -0.29
NCBP3-203ENST00000574379 LTBP3Q9NS15 1303 aa13.23□□□□□ -0.29
NCBP3-203ENST00000574379 TRAF5O00463 557 aa13.23□□□□□ -0.29
NCBP3-203ENST00000574379 RNMTO43148 476 aaKnown RBP13.23□□□□□ -0.29
NCBP3-203ENST00000574379 BRPF1P55201 1214 aaPredicted RBP13.23□□□□□ -0.29
NCBP3-203ENST00000574379 CABP4P57796 275 aa13.23□□□□□ -0.29
NCBP3-203ENST00000574379 TLL2Q9Y6L7 1015 aa13.23□□□□□ -0.29
NCBP3-203ENST00000574379 PDE6BP35913 854 aa13.22□□□□□ -0.29
NCBP3-203ENST00000574379 PLEKHF1Q96S99 279 aa13.22□□□□□ -0.29
NCBP3-203ENST00000574379 LGR6Q9HBX8 967 aa13.22□□□□□ -0.29
NCBP3-203ENST00000574379 GNAT3A8MTJ3 354 aa13.21□□□□□ -0.29
NCBP3-203ENST00000574379 LMOD1P29536 600 aaPredicted RBP13.21□□□□□ -0.29
NCBP3-203ENST00000574379 ZNF408Q9H9D4 720 aa13.21□□□□□ -0.29
NCBP3-203ENST00000574379 GJA3Q9Y6H8 435 aa13.21□□□□□ -0.29
NCBP3-203ENST00000574379 ADAMTSL1Q8N6G6 1762 aa13.21□□□□□ -0.29
NCBP3-203ENST00000574379 KDM3BQ7LBC6 1761 aa13.2□□□□□ -0.3
NCBP3-203ENST00000574379 SOGA3Q5TF21 947 aa13.2□□□□□ -0.3
NCBP3-203ENST00000574379 CST9Q5W186 159 aa13.2□□□□□ -0.3
NCBP3-203ENST00000574379 NFATC2IPQ8NCF5 419 aa13.2□□□□□ -0.3
NCBP3-203ENST00000574379 SLC52A2Q9HAB3 445 aa13.2□□□□□ -0.3
NCBP3-203ENST00000574379 ZNF277Q9NRM2 450 aaPredicted RBP13.2□□□□□ -0.3
NCBP3-203ENST00000574379 CEMIPQ8WUJ3 1361 aa13.2□□□□□ -0.3
NCBP3-203ENST00000574379 CACNA1SQ13698 1873 aa13.19□□□□□ -0.3
NCBP3-203ENST00000574379 CELF2O95319 508 aaKnown RBP13.19□□□□□ -0.3
NCBP3-203ENST00000574379 PRPF40BQ6NWY9 871 aaKnown RBP13.19□□□□□ -0.3
NCBP3-203ENST00000574379 IL17REQ8NFR9 667 aa13.19□□□□□ -0.3
NCBP3-203ENST00000574379 INTS5Q6P9B9 1019 aaKnown RBP13.18□□□□□ -0.3
NCBP3-203ENST00000574379 SLC17A8Q8NDX2 589 aa13.18□□□□□ -0.3
NCBP3-203ENST00000574379 CNKSR1Q969H4 720 aa13.18□□□□□ -0.3
NCBP3-203ENST00000574379 PNNQ9H307 717 aaKnown RBP13.18□□□□□ -0.3
NCBP3-203ENST00000574379 NARFQ9UHQ1 456 aa13.18□□□□□ -0.3
NCBP3-203ENST00000574379 ANP32CO43423 234 aa13.17□□□□□ -0.3
NCBP3-203ENST00000574379 FXR1P51114 621 aaKnown RBP eCLIP13.17□□□□□ -0.3
NCBP3-203ENST00000574379 CCDC184Q52MB2 194 aa13.17□□□□□ -0.3
NCBP3-203ENST00000574379 SAPCD2Q86UD0 394 aa13.17□□□□□ -0.3
NCBP3-203ENST00000574379 PDZRN3Q9UPQ7 1066 aa13.17□□□□□ -0.3
NCBP3-203ENST00000574379 NRXN2Q9P2S2 1712 aa13.16□□□□□ -0.3
NCBP3-203ENST00000574379 MAPK8IP3Q9UPT6 1336 aa13.16□□□□□ -0.3
NCBP3-203ENST00000574379 NEFMP07197 916 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms