RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 ZBED9Q6R2W3 1325 aa22.24■■□□□ 1.15
LITAF-212ENST00000573332 KIF6Q6ZMV9 814 aa22.23■■□□□ 1.15
LITAF-212ENST00000573332 COPS6Q7L5N1 327 aa22.23■■□□□ 1.15
LITAF-212ENST00000573332 ZNF652Q9Y2D9 606 aa22.23■■□□□ 1.15
LITAF-212ENST00000573332 MAP3K15Q6ZN16 1313 aa22.23■■□□□ 1.15
LITAF-212ENST00000573332 XAGE3Q8WTP9 111 aa22.22■■□□□ 1.15
LITAF-212ENST00000573332 PPP1R1BQ9UD71 204 aaPredicted RBP22.22■■□□□ 1.15
LITAF-212ENST00000573332 SCN7AQ01118 1682 aa22.21■■□□□ 1.15
LITAF-212ENST00000573332 NFIXQ14938 502 aa22.21■■□□□ 1.15
LITAF-212ENST00000573332 STK31Q9BXU1 1019 aa22.21■■□□□ 1.15
LITAF-212ENST00000573332 TBC1D9BQ66K14 1250 aa22.2■■□□□ 1.14
LITAF-212ENST00000573332 PARP3Q9Y6F1 533 aa22.2■■□□□ 1.14
LITAF-212ENST00000573332 POLRMTO00411 1230 aaKnown RBP22.19■■□□□ 1.14
LITAF-212ENST00000573332 DDR1Q08345 913 aa22.19■■□□□ 1.14
LITAF-212ENST00000573332 HLFQ16534 295 aa22.19■■□□□ 1.14
LITAF-212ENST00000573332 GIGYF2Q6Y7W6 1299 aaKnown RBP22.19■■□□□ 1.14
LITAF-212ENST00000573332 ZNF428Q96B54 188 aa22.19■■□□□ 1.14
LITAF-212ENST00000573332 BCORQ6W2J9 1755 aa22.18■■□□□ 1.14
LITAF-212ENST00000573332 CT47B1P0C2W7 299 aaPredicted RBP22.18■■□□□ 1.14
LITAF-212ENST00000573332 AIMP1Q12904 312 aaKnown RBP22.18■■□□□ 1.14
LITAF-212ENST00000573332 ANKRD13DQ6ZTN6 518 aa22.17■■□□□ 1.14
LITAF-212ENST00000573332 PLBD2Q8NHP8 589 aa22.17■■□□□ 1.14
LITAF-212ENST00000573332 ZBTB3Q9H5J0 574 aa22.17■■□□□ 1.14
LITAF-212ENST00000573332 PHAXQ9H814 394 aaKnown RBP22.17■■□□□ 1.14
LITAF-212ENST00000573332 SLC4A2P04920 1241 aa22.16■■□□□ 1.14
LITAF-212ENST00000573332 SETDB2Q96T68 719 aa22.16■■□□□ 1.14
LITAF-212ENST00000573332 ATP10DQ9P241 1426 aa22.15■■□□□ 1.14
LITAF-212ENST00000573332 SERPINB2P05120 415 aa22.15■■□□□ 1.14
LITAF-212ENST00000573332 FHDC1Q9C0D6 1143 aaPredicted RBP22.15■■□□□ 1.14
LITAF-212ENST00000573332 CD2APQ9Y5K6 639 aa22.15■■□□□ 1.14
LITAF-212ENST00000573332 CARMIL3Q8ND23 1372 aa22.14■■□□□ 1.14
LITAF-212ENST00000573332 TCERG1O14776 1098 aaKnown RBP22.14■■□□□ 1.13
LITAF-212ENST00000573332 HSP90AB3PQ58FF7 597 aa22.14■■□□□ 1.13
LITAF-212ENST00000573332 BICDL1Q6ZP65 573 aa22.14■■□□□ 1.13
LITAF-212ENST00000573332 ZNF34Q8IZ26 560 aa22.14■■□□□ 1.13
LITAF-212ENST00000573332 NIP7Q9Y221 180 aaKnown RBP eCLIP22.14■■□□□ 1.13
LITAF-212ENST00000573332 SRCAPQ6ZRS2 3230 aa22.13■■□□□ 1.13
LITAF-212ENST00000573332 SYT17Q9BSW7 474 aa22.13■■□□□ 1.13
LITAF-212ENST00000573332 DDX58O95786 925 aaKnown RBP22.12■■□□□ 1.13
LITAF-212ENST00000573332 TCIRG1Q13488 830 aa22.12■■□□□ 1.13
LITAF-212ENST00000573332 ALDH1L2Q3SY69 923 aa22.11■■□□□ 1.13
LITAF-212ENST00000573332 G2E3Q7L622 706 aa22.11■■□□□ 1.13
LITAF-212ENST00000573332 C10orf71Q711Q0 1435 aa22.11■■□□□ 1.13
LITAF-212ENST00000573332 FLIIQ13045 1269 aa22.1■■□□□ 1.13
LITAF-212ENST00000573332 PARP10Q53GL7 1025 aa22.1■■□□□ 1.13
LITAF-212ENST00000573332 KSR2Q6VAB6 950 aa22.1■■□□□ 1.13
LITAF-212ENST00000573332 RIC3Q7Z5B4 369 aa22.1■■□□□ 1.13
LITAF-212ENST00000573332 NRXN2Q9P2S2 1712 aa22.1■■□□□ 1.13
LITAF-212ENST00000573332 IBTKQ9P2D0 1353 aaPredicted RBP22.09■■□□□ 1.13
LITAF-212ENST00000573332 UBN2Q6ZU65 1347 aa22.08■■□□□ 1.13
LITAF-212ENST00000573332 TRIM28Q13263 835 aaKnown RBP22.08■■□□□ 1.13
LITAF-212ENST00000573332 PRR5LQ6MZQ0 368 aa22.08■■□□□ 1.13
LITAF-212ENST00000573332 TPTE2Q6XPS3 522 aa22.08■■□□□ 1.13
LITAF-212ENST00000573332 MRPL50Q8N5N7 158 aaKnown RBP22.08■■□□□ 1.13
LITAF-212ENST00000573332 ISCA1Q9BUE6 129 aa22.08■■□□□ 1.13
LITAF-212ENST00000573332 PI4KAP2A4QPH2 592 aa22.07■■□□□ 1.12
LITAF-212ENST00000573332 GPTP24298 496 aa22.07■■□□□ 1.12
LITAF-212ENST00000573332 TGFB2P61812 414 aa22.07■■□□□ 1.12
LITAF-212ENST00000573332 NBPF5PQ86XG9 351 aaPredicted RBP22.07■■□□□ 1.12
LITAF-212ENST00000573332 PI4KAP1Q8N8J0 262 aa22.07■■□□□ 1.12
LITAF-212ENST00000573332 SSH1Q8WYL5 1049 aa22.07■■□□□ 1.12
LITAF-212ENST00000573332 NYXQ9GZU5 481 aa22.07■■□□□ 1.12
LITAF-212ENST00000573332 NUP98P52948 1817 aa22.06■■□□□ 1.12
LITAF-212ENST00000573332 BRPF1P55201 1214 aaPredicted RBP22.06■■□□□ 1.12
LITAF-212ENST00000573332 NLRP10Q86W26 655 aa22.06■■□□□ 1.12
LITAF-212ENST00000573332 KLHL34Q8N239 644 aa22.06■■□□□ 1.12
LITAF-212ENST00000573332 CNBD1Q8NA66 436 aa22.06■■□□□ 1.12
LITAF-212ENST00000573332 METTL22Q9BUU2 404 aaPredicted RBP22.06■■□□□ 1.12
LITAF-212ENST00000573332 MAP3K2Q9Y2U5 619 aa22.06■■□□□ 1.12
LITAF-212ENST00000573332 ADCY9O60503 1353 aa22.06■■□□□ 1.12
LITAF-212ENST00000573332 FKBP5Q13451 457 aaPredicted RBP22.05■■□□□ 1.12
LITAF-212ENST00000573332 SUSD4Q5VX71 490 aa22.05■■□□□ 1.12
LITAF-212ENST00000573332 PPP1R42Q7Z4L9 355 aa22.05■■□□□ 1.12
LITAF-212ENST00000573332 RNF123Q5XPI4 1314 aa22.05■■□□□ 1.12
LITAF-212ENST00000573332 RARSP54136 660 aaKnown RBP22.04■■□□□ 1.12
LITAF-212ENST00000573332 NLGN2Q8NFZ4 835 aa22.04■■□□□ 1.12
LITAF-212ENST00000573332 BRIP1Q9BX63 1249 aa22.04■■□□□ 1.12
LITAF-212ENST00000573332 CACNA1FO60840 1977 aa22.04■■□□□ 1.12
LITAF-212ENST00000573332 KIF13BQ9NQT8 1826 aa22.03■■□□□ 1.12
LITAF-212ENST00000573332 NTSR2O95665 410 aa22.03■■□□□ 1.12
LITAF-212ENST00000573332 ST5P78524 1137 aa22.03■■□□□ 1.12
LITAF-212ENST00000573332 PDZRN3Q9UPQ7 1066 aa22.03■■□□□ 1.12
LITAF-212ENST00000573332 AFDNP55196 1824 aaKnown RBP22.02■■□□□ 1.12
LITAF-212ENST00000573332 MYD88Q99836 296 aa22.02■■□□□ 1.12
LITAF-212ENST00000573332 UTP14AQ9BVJ6 771 aaKnown RBP22.02■■□□□ 1.12
LITAF-212ENST00000573332 SMC4Q9NTJ3 1288 aa22.02■■□□□ 1.12
LITAF-212ENST00000573332 PTPRCP08575 1304 aa22.02■■□□□ 1.12
LITAF-212ENST00000573332 ATP5J2-PTCD1G3V325 749 aa22.01■■□□□ 1.11
LITAF-212ENST00000573332 NPHP1O15259 732 aa22.01■■□□□ 1.11
LITAF-212ENST00000573332 CCDC191Q8NCU4 936 aa22.01■■□□□ 1.11
LITAF-212ENST00000573332 DNAAF4Q8WXU2 420 aa22.01■■□□□ 1.11
LITAF-212ENST00000573332 PXDNLA1KZ92 1463 aa22.01■■□□□ 1.11
LITAF-212ENST00000573332 ARFGEF2Q9Y6D5 1785 aa22■■□□□ 1.11
LITAF-212ENST00000573332 RIC1Q4ADV7 1423 aa22■■□□□ 1.11
LITAF-212ENST00000573332 KLRG2A4D1S0 409 aaPredicted RBP22■■□□□ 1.11
LITAF-212ENST00000573332 FAM177BA6PVY3 158 aa22■■□□□ 1.11
LITAF-212ENST00000573332 GTF2E1P29083 439 aaPredicted RBP22■■□□□ 1.11
LITAF-212ENST00000573332 PDE6BP35913 854 aa22■■□□□ 1.11
LITAF-212ENST00000573332 NEXNQ0ZGT2 675 aa22■■□□□ 1.11
LITAF-212ENST00000573332 SLC10A5Q5PT55 438 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms