RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 NBPF5PQ86XG9 351 aaPredicted RBP22.84■■□□□ 1.25
LITAF-211ENST00000572255 LMNB1P20700 586 aa22.83■■□□□ 1.25
LITAF-211ENST00000572255 RIPK4P57078 832 aa22.83■■□□□ 1.25
LITAF-211ENST00000572255 CCDC88AQ3V6T2 1871 aa22.83■■□□□ 1.24
LITAF-211ENST00000572255 CACNA1SQ13698 1873 aa22.82■■□□□ 1.24
LITAF-211ENST00000572255 HSPA6P17066 643 aa22.82■■□□□ 1.24
LITAF-211ENST00000572255 PRELPP51888 382 aa22.82■■□□□ 1.24
LITAF-211ENST00000572255 NIP7Q9Y221 180 aaKnown RBP eCLIP22.82■■□□□ 1.24
LITAF-211ENST00000572255 KDM2BQ8NHM5 1336 aa22.82■■□□□ 1.24
LITAF-211ENST00000572255 NFKBIEO00221 500 aa22.81■■□□□ 1.24
LITAF-211ENST00000572255 TMPOP42166 694 aaKnown RBP22.81■■□□□ 1.24
LITAF-211ENST00000572255 HLFQ16534 295 aa22.81■■□□□ 1.24
LITAF-211ENST00000572255 TSPYL4Q9UJ04 414 aa22.81■■□□□ 1.24
LITAF-211ENST00000572255 ARFGEF2Q9Y6D5 1785 aa22.81■■□□□ 1.24
LITAF-211ENST00000572255 TIAM2Q8IVF5 1701 aa22.8■■□□□ 1.24
LITAF-211ENST00000572255 C21orf2O43822 256 aa22.8■■□□□ 1.24
LITAF-211ENST00000572255 TOMM70O94826 608 aa22.8■■□□□ 1.24
LITAF-211ENST00000572255 SRGNP10124 158 aa22.8■■□□□ 1.24
LITAF-211ENST00000572255 STYK1Q6J9G0 422 aa22.8■■□□□ 1.24
LITAF-211ENST00000572255 NGEFQ8N5V2 710 aa22.8■■□□□ 1.24
LITAF-211ENST00000572255 ZNF219Q9P2Y4 722 aaPredicted RBP22.8■■□□□ 1.24
LITAF-211ENST00000572255 RRP7AQ9Y3A4 280 aaKnown RBP22.8■■□□□ 1.24
LITAF-211ENST00000572255 TNRC6CQ9HCJ0 1690 aaKnown RBP22.8■■□□□ 1.24
LITAF-211ENST00000572255 SLX4Q8IY92 1834 aa22.8■■□□□ 1.24
LITAF-211ENST00000572255 ZC3H4Q9UPT8 1303 aaKnown RBP22.8■■□□□ 1.24
LITAF-211ENST00000572255 FER1L6Q2WGJ9 1857 aa22.79■■□□□ 1.24
LITAF-211ENST00000572255 LMOD3Q0VAK6 560 aa22.79■■□□□ 1.24
LITAF-211ENST00000572255 CNKSR1Q969H4 720 aa22.79■■□□□ 1.24
LITAF-211ENST00000572255 NUP98P52948 1817 aa22.79■■□□□ 1.24
LITAF-211ENST00000572255 TPTE2Q6XPS3 522 aa22.78■■□□□ 1.24
LITAF-211ENST00000572255 CCDC146Q8IYE0 955 aa22.78■■□□□ 1.24
LITAF-211ENST00000572255 MASTLQ96GX5 879 aa22.78■■□□□ 1.24
LITAF-211ENST00000572255 FAM177BA6PVY3 158 aa22.77■■□□□ 1.24
LITAF-211ENST00000572255 ERVV-1B6SEH8 477 aa22.77■■□□□ 1.24
LITAF-211ENST00000572255 MYL6BP14649 208 aa22.77■■□□□ 1.24
LITAF-211ENST00000572255 PRPF40BQ6NWY9 871 aaKnown RBP22.77■■□□□ 1.24
LITAF-211ENST00000572255 TTLL7Q6ZT98 887 aa22.77■■□□□ 1.24
LITAF-211ENST00000572255 MAP3K15Q6ZN16 1313 aa22.77■■□□□ 1.24
LITAF-211ENST00000572255 WDR43Q15061 677 aaKnown RBP eCLIP22.76■■□□□ 1.23
LITAF-211ENST00000572255 KIF6Q6ZMV9 814 aa22.76■■□□□ 1.23
LITAF-211ENST00000572255 BABAM1Q9NWV8 329 aa22.76■■□□□ 1.23
LITAF-211ENST00000572255 ERBB4Q15303 1308 aa22.76■■□□□ 1.23
LITAF-211ENST00000572255 NEUROD2Q15784 382 aa22.75■■□□□ 1.23
LITAF-211ENST00000572255 C16orf71Q8IYS4 520 aaPredicted RBP22.75■■□□□ 1.23
LITAF-211ENST00000572255 RRAGCQ9HB90 399 aa22.75■■□□□ 1.23
LITAF-211ENST00000572255 DICER1Q9UPY3 1922 aaKnown RBP22.74■■□□□ 1.23
LITAF-211ENST00000572255 KLRG2A4D1S0 409 aaPredicted RBP22.74■■□□□ 1.23
LITAF-211ENST00000572255 NPR1P16066 1061 aa22.74■■□□□ 1.23
LITAF-211ENST00000572255 RUNDC1Q96C34 613 aa22.74■■□□□ 1.23
LITAF-211ENST00000572255 PRKRIP1Q9H875 184 aaPredicted RBP22.74■■□□□ 1.23
LITAF-211ENST00000572255 RBM46Q8TBY0 533 aaKnown RBP22.73■■□□□ 1.23
LITAF-211ENST00000572255 ZBTB3Q9H5J0 574 aa22.73■■□□□ 1.23
LITAF-211ENST00000572255 LTBP3Q9NS15 1303 aa22.73■■□□□ 1.23
LITAF-211ENST00000572255 GLTPD2A6NH11 291 aa22.72■■□□□ 1.23
LITAF-211ENST00000572255 GTF2E1P29083 439 aaPredicted RBP22.72■■□□□ 1.23
LITAF-211ENST00000572255 SOGA3Q5TF21 947 aa22.72■■□□□ 1.23
LITAF-211ENST00000572255 ADAMTS8Q9UP79 889 aa22.72■■□□□ 1.23
LITAF-211ENST00000572255 EIF2S2P20042 333 aaKnown RBP22.71■■□□□ 1.23
LITAF-211ENST00000572255 NYXQ9GZU5 481 aa22.71■■□□□ 1.23
LITAF-211ENST00000572255 TAOK3Q9H2K8 898 aa22.71■■□□□ 1.23
LITAF-211ENST00000572255 GPTP24298 496 aa22.7■■□□□ 1.22
LITAF-211ENST00000572255 PDIA6Q15084 440 aa22.7■■□□□ 1.22
LITAF-211ENST00000572255 TRIM35Q9UPQ4 493 aa22.7■■□□□ 1.22
LITAF-211ENST00000572255 ABCC12Q96J65 1359 aa22.7■■□□□ 1.22
LITAF-211ENST00000572255 UBN2Q6ZU65 1347 aa22.69■■□□□ 1.22
LITAF-211ENST00000572255 APLP1P51693 650 aa22.69■■□□□ 1.22
LITAF-211ENST00000572255 ERFEQ4G0M1 354 aa22.69■■□□□ 1.22
LITAF-211ENST00000572255 LRP10Q7Z4F1 713 aa22.69■■□□□ 1.22
LITAF-211ENST00000572255 NUTM1Q86Y26 1132 aa22.69■■□□□ 1.22
LITAF-211ENST00000572255 C7orf43Q8WVR3 580 aa22.69■■□□□ 1.22
LITAF-211ENST00000572255 IBTKQ9P2D0 1353 aaPredicted RBP22.68■■□□□ 1.22
LITAF-211ENST00000572255 CHL1O00533 1208 aa22.68■■□□□ 1.22
LITAF-211ENST00000572255 GIGYF2Q6Y7W6 1299 aaKnown RBP22.68■■□□□ 1.22
LITAF-211ENST00000572255 ANXA1P04083 346 aa22.67■■□□□ 1.22
LITAF-211ENST00000572255 FSTL1Q12841 308 aa22.67■■□□□ 1.22
LITAF-211ENST00000572255 PROSER3Q2NL68 480 aa22.67■■□□□ 1.22
LITAF-211ENST00000572255 CCDC93Q567U6 631 aa22.67■■□□□ 1.22
LITAF-211ENST00000572255 ZNF34Q8IZ26 560 aa22.67■■□□□ 1.22
LITAF-211ENST00000572255 VEGFAP15692 232 aaPredicted RBP22.66■■□□□ 1.22
LITAF-211ENST00000572255 SUSD4Q5VX71 490 aa22.66■■□□□ 1.22
LITAF-211ENST00000572255 NECTIN2Q92692 538 aa22.66■■□□□ 1.22
LITAF-211ENST00000572255 LAS1LQ9Y4W2 734 aaKnown RBP22.66■■□□□ 1.22
LITAF-211ENST00000572255 RIC1Q4ADV7 1423 aa22.65■■□□□ 1.22
LITAF-211ENST00000572255 ALDH1B1P30837 517 aa22.65■■□□□ 1.22
LITAF-211ENST00000572255 KRT24Q2M2I5 525 aa22.65■■□□□ 1.22
LITAF-211ENST00000572255 CRY2Q49AN0 593 aa22.65■■□□□ 1.22
LITAF-211ENST00000572255 DPY19L2Q6NUT2 758 aa22.65■■□□□ 1.22
LITAF-211ENST00000572255 WDR90Q96KV7 1748 aa22.65■■□□□ 1.22
LITAF-211ENST00000572255 NTSR2O95665 410 aa22.64■■□□□ 1.21
LITAF-211ENST00000572255 OLFM4Q6UX06 510 aa22.63■■□□□ 1.21
LITAF-211ENST00000572255 ANKRD36CQ5JPF3 1778 aa22.63■■□□□ 1.21
LITAF-211ENST00000572255 FKBP4Q02790 459 aaKnown RBP eCLIP22.62■■□□□ 1.21
LITAF-211ENST00000572255 PARP10Q53GL7 1025 aa22.62■■□□□ 1.21
LITAF-211ENST00000572255 PPP1R42Q7Z4L9 355 aa22.62■■□□□ 1.21
LITAF-211ENST00000572255 SMC1BQ8NDV3 1235 aa22.62■■□□□ 1.21
LITAF-211ENST00000572255 POTECB2RU33 542 aa22.61■■□□□ 1.21
LITAF-211ENST00000572255 COPS6Q7L5N1 327 aa22.61■■□□□ 1.21
LITAF-211ENST00000572255 RTKN2Q8IZC4 609 aa22.61■■□□□ 1.21
LITAF-211ENST00000572255 XAGE3Q8WTP9 111 aa22.61■■□□□ 1.21
LITAF-211ENST00000572255 RPGRQ92834 1020 aaKnown RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms