RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 TIAM2Q8IVF5 1701 aa15.03■□□□□ -0
LITAF-206ENST00000571277 TNRC6CQ9HCJ0 1690 aaKnown RBP15.03■□□□□ -0
LITAF-206ENST00000571277 LMNB1P20700 586 aa15.02■□□□□ -0
LITAF-206ENST00000571277 DDX10Q13206 875 aaKnown RBP15.02■□□□□ -0
LITAF-206ENST00000571277 CACNA1SQ13698 1873 aa15.01□□□□□ -0.01
LITAF-206ENST00000571277 MAPK8IP3Q9UPT6 1336 aa15.01□□□□□ -0.01
LITAF-206ENST00000571277 ZC3H4Q9UPT8 1303 aaKnown RBP15.01□□□□□ -0.01
LITAF-206ENST00000571277 SRGNP10124 158 aa15.01□□□□□ -0.01
LITAF-206ENST00000571277 ZNF622Q969S3 477 aaKnown RBP eCLIP15.01□□□□□ -0.01
LITAF-206ENST00000571277 PNNQ9H307 717 aaKnown RBP15.01□□□□□ -0.01
LITAF-206ENST00000571277 ZNF652Q9Y2D9 606 aa15.01□□□□□ -0.01
LITAF-206ENST00000571277 KDM2BQ8NHM5 1336 aa15□□□□□ -0.01
LITAF-206ENST00000571277 KLRG2A4D1S0 409 aaPredicted RBP15□□□□□ -0.01
LITAF-206ENST00000571277 ST5P78524 1137 aa15□□□□□ -0.01
LITAF-206ENST00000571277 HLFQ16534 295 aa15□□□□□ -0.01
LITAF-206ENST00000571277 STYK1Q6J9G0 422 aa15□□□□□ -0.01
LITAF-206ENST00000571277 DICER1Q9UPY3 1922 aaKnown RBP15□□□□□ -0.01
LITAF-206ENST00000571277 NUP98P52948 1817 aa14.99□□□□□ -0.01
LITAF-206ENST00000571277 MYBBP1AQ9BQG0 1328 aaKnown RBP14.99□□□□□ -0.01
LITAF-206ENST00000571277 C21orf2O43822 256 aa14.99□□□□□ -0.01
LITAF-206ENST00000571277 NBPF5PQ86XG9 351 aaPredicted RBP14.99□□□□□ -0.01
LITAF-206ENST00000571277 NIP7Q9Y221 180 aaKnown RBP eCLIP14.99□□□□□ -0.01
LITAF-206ENST00000571277 PRPF40BQ6NWY9 871 aaKnown RBP14.98□□□□□ -0.01
LITAF-206ENST00000571277 RBM46Q8TBY0 533 aaKnown RBP14.98□□□□□ -0.01
LITAF-206ENST00000571277 MASTLQ96GX5 879 aa14.98□□□□□ -0.01
LITAF-206ENST00000571277 RRAGCQ9HB90 399 aa14.98□□□□□ -0.01
LITAF-206ENST00000571277 LTBP3Q9NS15 1303 aa14.97□□□□□ -0.01
LITAF-206ENST00000571277 ERVV-1B6SEH8 477 aa14.97□□□□□ -0.01
LITAF-206ENST00000571277 NPHP1O15259 732 aa14.97□□□□□ -0.01
LITAF-206ENST00000571277 TMPOP42166 694 aaKnown RBP14.97□□□□□ -0.01
LITAF-206ENST00000571277 RIPK4P57078 832 aa14.97□□□□□ -0.01
LITAF-206ENST00000571277 TTLL7Q6ZT98 887 aa14.97□□□□□ -0.01
LITAF-206ENST00000571277 C7orf43Q8WVR3 580 aa14.97□□□□□ -0.01
LITAF-206ENST00000571277 CNKSR1Q969H4 720 aa14.97□□□□□ -0.01
LITAF-206ENST00000571277 ZNF219Q9P2Y4 722 aaPredicted RBP14.97□□□□□ -0.01
LITAF-206ENST00000571277 MAP3K15Q6ZN16 1313 aa14.96□□□□□ -0.01
LITAF-206ENST00000571277 GLTPD2A6NH11 291 aa14.96□□□□□ -0.01
LITAF-206ENST00000571277 TPTE2Q6XPS3 522 aa14.96□□□□□ -0.01
LITAF-206ENST00000571277 LRP10Q7Z4F1 713 aa14.96□□□□□ -0.01
LITAF-206ENST00000571277 RRP7AQ9Y3A4 280 aaKnown RBP14.96□□□□□ -0.01
LITAF-206ENST00000571277 PDIA6Q15084 440 aa14.95□□□□□ -0.02
LITAF-206ENST00000571277 NGEFQ8N5V2 710 aa14.95□□□□□ -0.02
LITAF-206ENST00000571277 TSPYL4Q9UJ04 414 aa14.95□□□□□ -0.02
LITAF-206ENST00000571277 ABCC12Q96J65 1359 aa14.95□□□□□ -0.02
LITAF-206ENST00000571277 WDR90Q96KV7 1748 aa14.95□□□□□ -0.02
LITAF-206ENST00000571277 ERBB4Q15303 1308 aa14.94□□□□□ -0.02
LITAF-206ENST00000571277 FAM177BA6PVY3 158 aa14.94□□□□□ -0.02
LITAF-206ENST00000571277 MYL6BP14649 208 aa14.94□□□□□ -0.02
LITAF-206ENST00000571277 NPR1P16066 1061 aa14.94□□□□□ -0.02
LITAF-206ENST00000571277 APLP1P51693 650 aa14.94□□□□□ -0.02
LITAF-206ENST00000571277 BABAM1Q9NWV8 329 aa14.94□□□□□ -0.02
LITAF-206ENST00000571277 UBN2Q6ZU65 1347 aa14.93□□□□□ -0.02
LITAF-206ENST00000571277 POTECB2RU33 542 aa14.93□□□□□ -0.02
LITAF-206ENST00000571277 FSTL1Q12841 308 aa14.93□□□□□ -0.02
LITAF-206ENST00000571277 CRY2Q49AN0 593 aa14.93□□□□□ -0.02
LITAF-206ENST00000571277 CCDC146Q8IYE0 955 aa14.93□□□□□ -0.02
LITAF-206ENST00000571277 C16orf71Q8IYS4 520 aaPredicted RBP14.93□□□□□ -0.02
LITAF-206ENST00000571277 DNAJC5GQ8N7S2 189 aa14.93□□□□□ -0.02
LITAF-206ENST00000571277 TAOK3Q9H2K8 898 aa14.93□□□□□ -0.02
LITAF-206ENST00000571277 RIC1Q4ADV7 1423 aa14.92□□□□□ -0.02
LITAF-206ENST00000571277 VEGFAP15692 232 aaPredicted RBP14.92□□□□□ -0.02
LITAF-206ENST00000571277 LMOD3Q0VAK6 560 aa14.92□□□□□ -0.02
LITAF-206ENST00000571277 ERFEQ4G0M1 354 aa14.92□□□□□ -0.02
LITAF-206ENST00000571277 SOGA3Q5TF21 947 aa14.92□□□□□ -0.02
LITAF-206ENST00000571277 KIF6Q6ZMV9 814 aa14.92□□□□□ -0.02
LITAF-206ENST00000571277 NUTM1Q86Y26 1132 aa14.92□□□□□ -0.02
LITAF-206ENST00000571277 ZNF34Q8IZ26 560 aa14.92□□□□□ -0.02
LITAF-206ENST00000571277 ZBTB3Q9H5J0 574 aa14.92□□□□□ -0.02
LITAF-206ENST00000571277 TRIM35Q9UPQ4 493 aa14.92□□□□□ -0.02
LITAF-206ENST00000571277 IBTKQ9P2D0 1353 aaPredicted RBP14.92□□□□□ -0.02
LITAF-206ENST00000571277 SNED1Q8TER0 1413 aa14.92□□□□□ -0.02
LITAF-206ENST00000571277 CHL1O00533 1208 aa14.91□□□□□ -0.02
LITAF-206ENST00000571277 PROSER3Q2NL68 480 aa14.91□□□□□ -0.02
LITAF-206ENST00000571277 OLFM4Q6UX06 510 aa14.91□□□□□ -0.02
LITAF-206ENST00000571277 GIGYF2Q6Y7W6 1299 aaKnown RBP14.91□□□□□ -0.02
LITAF-206ENST00000571277 RUNDC1Q96C34 613 aa14.91□□□□□ -0.02
LITAF-206ENST00000571277 PRKRIP1Q9H875 184 aaPredicted RBP14.91□□□□□ -0.02
LITAF-206ENST00000571277 ADAMTS8Q9UP79 889 aa14.91□□□□□ -0.02
LITAF-206ENST00000571277 GPTP24298 496 aa14.9□□□□□ -0.02
LITAF-206ENST00000571277 NEUROD2Q15784 382 aa14.9□□□□□ -0.02
LITAF-206ENST00000571277 CCDC93Q567U6 631 aa14.9□□□□□ -0.02
LITAF-206ENST00000571277 SUSD4Q5VX71 490 aa14.9□□□□□ -0.02
LITAF-206ENST00000571277 NYXQ9GZU5 481 aa14.9□□□□□ -0.02
LITAF-206ENST00000571277 NTSR2O95665 410 aa14.89□□□□□ -0.03
LITAF-206ENST00000571277 ANXA1P04083 346 aa14.89□□□□□ -0.03
LITAF-206ENST00000571277 EIF2S2P20042 333 aaKnown RBP14.89□□□□□ -0.03
LITAF-206ENST00000571277 GTF2E1P29083 439 aaPredicted RBP14.89□□□□□ -0.03
LITAF-206ENST00000571277 KRT24Q2M2I5 525 aa14.89□□□□□ -0.03
LITAF-206ENST00000571277 DPY19L2Q6NUT2 758 aa14.89□□□□□ -0.03
LITAF-206ENST00000571277 SMC1BQ8NDV3 1235 aa14.89□□□□□ -0.03
LITAF-206ENST00000571277 ANKRD36CQ5JPF3 1778 aa14.88□□□□□ -0.03
LITAF-206ENST00000571277 ALDH1B1P30837 517 aa14.88□□□□□ -0.03
LITAF-206ENST00000571277 HOXA10P31260 410 aaPredicted RBP14.88□□□□□ -0.03
LITAF-206ENST00000571277 HTRA3P83110 453 aa14.88□□□□□ -0.03
LITAF-206ENST00000571277 WDR43Q15061 677 aaKnown RBP eCLIP14.88□□□□□ -0.03
LITAF-206ENST00000571277 FKBP4Q02790 459 aaKnown RBP eCLIP14.87□□□□□ -0.03
LITAF-206ENST00000571277 DDNO94850 711 aaPredicted RBP14.86□□□□□ -0.03
LITAF-206ENST00000571277 C3orf67Q6ZVT6 689 aa14.86□□□□□ -0.03
LITAF-206ENST00000571277 RTKN2Q8IZC4 609 aa14.86□□□□□ -0.03
LITAF-206ENST00000571277 NECTIN2Q92692 538 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms