RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 SETDB2Q96T68 719 aa19.86■□□□□ 0.77
RAB40B-203ENST00000570676 CCDC146Q8IYE0 955 aa19.85■□□□□ 0.77
RAB40B-203ENST00000570676 CNBD1Q8NA66 436 aa19.85■□□□□ 0.77
RAB40B-203ENST00000570676 BRIP1Q9BX63 1249 aa19.85■□□□□ 0.77
RAB40B-203ENST00000570676 SLX4Q8IY92 1834 aa19.85■□□□□ 0.77
RAB40B-203ENST00000570676 C9orf131Q5VYM1 1079 aa19.84■□□□□ 0.77
RAB40B-203ENST00000570676 TTLL6Q8N841 843 aa19.84■□□□□ 0.77
RAB40B-203ENST00000570676 ZNF652Q9Y2D9 606 aa19.84■□□□□ 0.77
RAB40B-203ENST00000570676 RRP7AQ9Y3A4 280 aaKnown RBP19.84■□□□□ 0.77
RAB40B-203ENST00000570676 DICER1Q9UPY3 1922 aaKnown RBP19.84■□□□□ 0.77
RAB40B-203ENST00000570676 ANKRD36CQ5JPF3 1778 aa19.83■□□□□ 0.77
RAB40B-203ENST00000570676 H0YIN7 160 aa19.83■□□□□ 0.77
RAB40B-203ENST00000570676 LMOD3Q0VAK6 560 aa19.83■□□□□ 0.77
RAB40B-203ENST00000570676 TSPYL4Q9UJ04 414 aa19.83■□□□□ 0.77
RAB40B-203ENST00000570676 KIF3CO14782 793 aa19.82■□□□□ 0.76
RAB40B-203ENST00000570676 PDE6BP35913 854 aa19.82■□□□□ 0.76
RAB40B-203ENST00000570676 RASSF7Q02833 373 aa19.82■□□□□ 0.76
RAB40B-203ENST00000570676 WDR43Q15061 677 aaKnown RBP eCLIP19.82■□□□□ 0.76
RAB40B-203ENST00000570676 RUNDC1Q96C34 613 aa19.82■□□□□ 0.76
RAB40B-203ENST00000570676 PDZRN3Q9UPQ7 1066 aa19.82■□□□□ 0.76
RAB40B-203ENST00000570676 ERBB4Q15303 1308 aa19.81■□□□□ 0.76
RAB40B-203ENST00000570676 ST5P78524 1137 aa19.81■□□□□ 0.76
RAB40B-203ENST00000570676 HLFQ16534 295 aa19.81■□□□□ 0.76
RAB40B-203ENST00000570676 BABAM1Q9NWV8 329 aa19.81■□□□□ 0.76
RAB40B-203ENST00000570676 ADAMTS8Q9UP79 889 aa19.81■□□□□ 0.76
RAB40B-203ENST00000570676 SENP3-EIF4A1A0A087X0R7 540 aa19.8■□□□□ 0.76
RAB40B-203ENST00000570676 PRELPP51888 382 aa19.8■□□□□ 0.76
RAB40B-203ENST00000570676 NBPF5PQ86XG9 351 aaPredicted RBP19.8■□□□□ 0.76
RAB40B-203ENST00000570676 RNF181Q9P0P0 153 aa19.8■□□□□ 0.76
RAB40B-203ENST00000570676 TRIM35Q9UPQ4 493 aa19.8■□□□□ 0.76
RAB40B-203ENST00000570676 NIP7Q9Y221 180 aaKnown RBP eCLIP19.8■□□□□ 0.76
RAB40B-203ENST00000570676 MAP3K15Q6ZN16 1313 aa19.79■□□□□ 0.76
RAB40B-203ENST00000570676 NFKBIEO00221 500 aa19.79■□□□□ 0.76
RAB40B-203ENST00000570676 TTLL7Q6ZT98 887 aa19.79■□□□□ 0.76
RAB40B-203ENST00000570676 LRP10Q7Z4F1 713 aa19.79■□□□□ 0.76
RAB40B-203ENST00000570676 NPHP1O15259 732 aa19.78■□□□□ 0.76
RAB40B-203ENST00000570676 SRGNP10124 158 aa19.78■□□□□ 0.76
RAB40B-203ENST00000570676 NEUROD2Q15784 382 aa19.78■□□□□ 0.76
RAB40B-203ENST00000570676 ZNF622Q969S3 477 aaKnown RBP eCLIP19.78■□□□□ 0.76
RAB40B-203ENST00000570676 ERVV-1B6SEH8 477 aa19.77■□□□□ 0.76
RAB40B-203ENST00000570676 MYL6BP14649 208 aa19.77■□□□□ 0.76
RAB40B-203ENST00000570676 PDIA6Q15084 440 aa19.77■□□□□ 0.76
RAB40B-203ENST00000570676 STYK1Q6J9G0 422 aa19.77■□□□□ 0.76
RAB40B-203ENST00000570676 NGEFQ8N5V2 710 aa19.77■□□□□ 0.76
RAB40B-203ENST00000570676 ABCC12Q96J65 1359 aa19.77■□□□□ 0.76
RAB40B-203ENST00000570676 IBTKQ9P2D0 1353 aaPredicted RBP19.76■□□□□ 0.75
RAB40B-203ENST00000570676 NMRK2Q9NPI5 230 aa19.76■□□□□ 0.75
RAB40B-203ENST00000570676 RIC1Q4ADV7 1423 aa19.76■□□□□ 0.75
RAB40B-203ENST00000570676 ZC3H4Q9UPT8 1303 aaKnown RBP19.76■□□□□ 0.75
RAB40B-203ENST00000570676 KLRG2A4D1S0 409 aaPredicted RBP19.75■□□□□ 0.75
RAB40B-203ENST00000570676 CHL1O00533 1208 aa19.75■□□□□ 0.75
RAB40B-203ENST00000570676 KIF6Q6ZMV9 814 aa19.75■□□□□ 0.75
RAB40B-203ENST00000570676 MASTLQ96GX5 879 aa19.75■□□□□ 0.75
RAB40B-203ENST00000570676 UBN2Q6ZU65 1347 aa19.75■□□□□ 0.75
RAB40B-203ENST00000570676 C21orf2O43822 256 aa19.74■□□□□ 0.75
RAB40B-203ENST00000570676 LMNB1P20700 586 aa19.74■□□□□ 0.75
RAB40B-203ENST00000570676 PROSER3Q2NL68 480 aa19.74■□□□□ 0.75
RAB40B-203ENST00000570676 PRPF40BQ6NWY9 871 aaKnown RBP19.74■□□□□ 0.75
RAB40B-203ENST00000570676 TPTE2Q6XPS3 522 aa19.74■□□□□ 0.75
RAB40B-203ENST00000570676 CNKSR1Q969H4 720 aa19.74■□□□□ 0.75
RAB40B-203ENST00000570676 ZBTB3Q9H5J0 574 aa19.74■□□□□ 0.75
RAB40B-203ENST00000570676 LAMB2P55268 1798 aa19.74■□□□□ 0.75
RAB40B-203ENST00000570676 FAM177BA6PVY3 158 aa19.73■□□□□ 0.75
RAB40B-203ENST00000570676 KRT24Q2M2I5 525 aa19.73■□□□□ 0.75
RAB40B-203ENST00000570676 ZNF219Q9P2Y4 722 aaPredicted RBP19.73■□□□□ 0.75
RAB40B-203ENST00000570676 ANXA1P04083 346 aa19.72■□□□□ 0.75
RAB40B-203ENST00000570676 EIF2S2P20042 333 aaKnown RBP19.72■□□□□ 0.75
RAB40B-203ENST00000570676 FAM9BQ8IZU0 186 aa19.72■□□□□ 0.75
RAB40B-203ENST00000570676 WDR90Q96KV7 1748 aa19.72■□□□□ 0.75
RAB40B-203ENST00000570676 LTBP3Q9NS15 1303 aa19.72■□□□□ 0.75
RAB40B-203ENST00000570676 GIGYF2Q6Y7W6 1299 aaKnown RBP19.71■□□□□ 0.75
RAB40B-203ENST00000570676 ZNF34Q8IZ26 560 aa19.71■□□□□ 0.75
RAB40B-203ENST00000570676 KDM2BQ8NHM5 1336 aa19.71■□□□□ 0.75
RAB40B-203ENST00000570676 NPR1P16066 1061 aa19.7■□□□□ 0.74
RAB40B-203ENST00000570676 GPTP24298 496 aa19.7■□□□□ 0.74
RAB40B-203ENST00000570676 NUTM1Q86Y26 1132 aa19.7■□□□□ 0.74
RAB40B-203ENST00000570676 SNED1Q8TER0 1413 aa19.69■□□□□ 0.74
RAB40B-203ENST00000570676 NTSR2O95665 410 aa19.69■□□□□ 0.74
RAB40B-203ENST00000570676 C7orf43Q8WVR3 580 aa19.69■□□□□ 0.74
RAB40B-203ENST00000570676 NYXQ9GZU5 481 aa19.69■□□□□ 0.74
RAB40B-203ENST00000570676 LAS1LQ9Y4W2 734 aaKnown RBP19.69■□□□□ 0.74
RAB40B-203ENST00000570676 APAF1O14727 1248 aa19.68■□□□□ 0.74
RAB40B-203ENST00000570676 TOMM70O94826 608 aa19.68■□□□□ 0.74
RAB40B-203ENST00000570676 HSPA6P17066 643 aa19.68■□□□□ 0.74
RAB40B-203ENST00000570676 CRY2Q49AN0 593 aa19.68■□□□□ 0.74
RAB40B-203ENST00000570676 ERFEQ4G0M1 354 aa19.68■□□□□ 0.74
RAB40B-203ENST00000570676 SUSD4Q5VX71 490 aa19.68■□□□□ 0.74
RAB40B-203ENST00000570676 NECTIN2Q92692 538 aa19.68■□□□□ 0.74
RAB40B-203ENST00000570676 CFAP44Q96MT7 982 aa19.68■□□□□ 0.74
RAB40B-203ENST00000570676 TAOK3Q9H2K8 898 aa19.68■□□□□ 0.74
RAB40B-203ENST00000570676 HOXB7P09629 217 aa19.67■□□□□ 0.74
RAB40B-203ENST00000570676 SOGA3Q5TF21 947 aa19.67■□□□□ 0.74
RAB40B-203ENST00000570676 DDX60Q8IY21 1712 aaKnown RBP19.67■□□□□ 0.74
RAB40B-203ENST00000570676 ZNF853P0CG23 659 aa19.66■□□□□ 0.74
RAB40B-203ENST00000570676 GTF2E1P29083 439 aaPredicted RBP19.66■□□□□ 0.74
RAB40B-203ENST00000570676 DDX21Q9NR30 783 aaKnown RBP eCLIP19.66■□□□□ 0.74
RAB40B-203ENST00000570676 MBIPQ9NS73 344 aa19.66■□□□□ 0.74
RAB40B-203ENST00000570676 GLTPD2A6NH11 291 aa19.65■□□□□ 0.74
RAB40B-203ENST00000570676 PARP10Q53GL7 1025 aa19.65■□□□□ 0.74
RAB40B-203ENST00000570676 CCDC93Q567U6 631 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms